Xenia sp. Carnegie-2017 (soft corals): 124441685
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Entry
124441685 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124441685
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124441685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
124441685
NCBI-ProteinID:
XP_046848108
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MTFVIVSDVDENGSKVENSLADQMKLAAIYDDQRMINNILREKRSDREIQRLLSKTDERG
QPCIFYALESRSLNSLTSLLNHVKDTKCVIAKNGESVLHVATRMGDVDFLRNLLQHDFIV
DLVNHVEGVSRRSPLHFAATFNHVEIAKVLLEHGGKITEVDITDKCPLYIAANKGHANML
ELFLKHEKRRVQELLFSERYGGKYYRNILHVAVDSGDERTVQVCLQDENVIREDLCEEIR
HGDGYLIHAACKKGMEKSLFRFMDVMRHLDLLQLNRKDKQGFTPIHKAAINNHSDENSQS
ALVLAAERGHVRVVEELLKLKADFTIRDDSNRTVLHYAIAYPETLRILLKKKDLVPLLIN
EKEIDGYTPIHNAALKGFLESVRILLEYNADLNVFTNTSRSPLHCAVSSQNSDVVELILA
NEPALINKVDATGKTPLHTAANFSSPEVVKCLLNNGAIILRDGNMFSPLHIAAFKGHLNI
VELLVMFKPSMIDWENKYKRTALLTAAVKGKADVVKYLLDSMAKITKIMKLPNASINVKV
AMIICLISAGVQTLKEICQLFVYKFNYFMDKVNYLECVLYVSTFIFAVPSNDSMSVKTSF
QWMACSVALFCAWINLIMYLRRFASYGIIILMMRKISFTLIKVMGLLIFFLVAFAAAFTV
IMNDRQGFEKFSVSILTGATMTMGEFDFKQTFLGDHSDYNTFYLLQLVLLVGFLVIMPII
IMNLLLALAIDDTSSIMQHAKLQKHIQTAKMIIDIERKRSSFPWRNKKTLIPCLQERPNK
TYNFTRPVWDFIFYGPDFSTNVVDESRDMSTLIEMVKELQNKMLEIQNEFTMGQDKQNAM
ALFRGYSERIETFNPEETRAESKLKAWGRVQNDHEKFSVPSSSYYGFGDDLKYSEGDFDE
EREARENDPELNELKRQHSQMDTYEDKDGVVAHDDVTISVNENEAEDSSLFNNNDKLSMI
LRTDSSVV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgtaattgtgagtgacgttgacgaaaacgggagtaaggtggaaaatagttta
gctgatcaaatgaaactggcggcaatttatgacgaccaaagaatgatcaataatattttg
agagagaaaagaagtgaccgtgaaattcaaagattactctcgaaaactgatgaaagagga
caaccatgtatattttacgctttggagtcgcgtagtcttaattctcttacttccttgtta
aatcacgtaaaagacaccaagtgtgtgatagctaagaacggagagagtgtacttcatgta
gccacgagaatgggtgacgtagattttcttcgtaacttgttgcaacacgacttcattgtt
gatcttgtaaaccatgttgaaggcgtgagtagacgatcgccacttcattttgccgcaacg
ttcaaccatgttgagatcgccaaggtgttgctagaacacggtggaaagataacagaggtt
gatatcacagacaaatgtccattgtacatcgctgctaataaaggacatgctaatatgctt
gaacttttcctgaaacacgaaaaaagaagagtgcaagagttattgttcagcgagaggtat
ggtggaaagtattaccgcaatatacttcatgttgctgtggacagtggggatgaacgtact
gtacaagtttgtctgcaagatgaaaatgtgattcgtgaagatttgtgcgaagaaatcaga
catggagatggttatttgattcatgcggcttgcaaaaagggcatggagaagagtttattt
cgatttatggatgtcatgagacatttggacttacttcagttgaacagaaaggataaacaa
ggattcactccgattcataaagccgcaatcaataatcacagtgacgaaaactcccagtct
gcgttggtccttgccgctgaacgcggtcatgttcgtgtcgttgaagaactgcttaaattg
aaagctgattttaccattcgtgatgacagcaatagaacggttcttcactatgcaattgca
tatcctgaaacattgagaattttgcttaagaaaaaagatctcgtgccgttgcttattaac
gagaaagaaatagacggttatactcccattcataatgccgccttaaaaggatttcttgag
agtgtccgtattttgttagaatataacgctgatctgaatgtcttcacgaacacttctcgt
tcgccattacattgcgctgttagttcacagaactctgatgtggttgaattaatcctagcc
aatgaaccagctttgatcaacaaggttgatgctaccgggaaaacaccgctccatacagca
gcaaacttcagtagcccagaggtcgtcaaatgtcttctgaataacggagcaattatactg
agggatggaaatatgtttagtccacttcacattgcggcgttcaaaggacatcttaatatt
gttgaattgttggtgatgttcaaaccttccatgatcgattgggaaaataaatacaaacga
acagcattgcttacagcagctgtgaaaggcaaagcagatgttgtgaagtatttgctagat
agcatggcgaaaattacaaagattatgaaattaccaaatgcgtcgataaatgttaaggtt
gcgatgattatatgtctcatatctgctggcgttcaaacattgaaagaaatctgtcagtta
ttcgtttacaaattcaattattttatggacaaagtcaactatttggaatgtgttctctac
gtatcaacattcatctttgctgtaccaagtaacgacagtatgtctgtaaagacaagtttt
caatggatggcctgttctgtagcgttattctgtgcttggataaatcttattatgtatcta
agaaggtttgcctcctacggtataattattctcatgatgagaaaaatttccttcacacta
atcaaggtcatgggtcttttaatatttttcttggtcgcttttgctgccgcttttacagta
ataatgaatgatagacagggatttgagaagtttagcgtgtctatcttaactggagcaacg
atgacgatgggagagtttgattttaaacagacatttctcggtgaccactctgattacaac
acattttatctactacagttggtcctccttgttggttttcttgtcattatgcctatcatt
attatgaaccttctgcttgcccttgccattgatgataccagtagcattatgcaacacgct
aagctgcagaaacacattcaaacggcaaaaatgataattgacatagaacggaagaggtct
tcatttccatggcgaaataaaaaaacactcataccttgtttacaggagagacccaacaag
acatacaactttacccgccccgtttgggattttatattttacggtcctgatttttctacc
aatgtagtcgatgagagccgggacatgtcaacgttgattgaaatggtgaaagaactgcaa
aataaaatgttggagattcaaaacgagtttacaatgggtcaagataaacaaaacgctatg
gctctatttcgaggttacagtgagagaatagaaacctttaatccagaggagacaagagct
gagtctaagctaaaggcttggggaagagtacaaaacgatcatgagaaattcagtgtaccg
agttcaagttactatggcttcggtgatgatttgaagtattctgaaggagattttgacgaa
gagagagaagcaagagagaacgatcccgaattaaatgaattaaagagacagcatagtcaa
atggatacatacgaagataaagatggggtagtcgctcatgatgatgtgacaatttctgtg
aatgaaaatgaggctgaagacagtagtctatttaataataatgataaactgtcaatgatt
cttcgtactgattccagtgttgtctga
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