Xenia sp. Carnegie-2017 (soft corals): 124441755
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Entry
124441755 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: denticleless protein homolog B-like
KO
K11790
denticleless
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124441755
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124441755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
124441755
NCBI-ProteinID:
XP_046848178
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MNFLRSLHERRIIQSYSPKPRNVRIDFVIQALKCHKDDQHYVKGLDSERDVPPFACSFNQ
SLVYGHMLSVADEEGGVCLYDTRKHGPSARLKGWVAHSNAIFDVAWVGNEAKLVTASGDQ
TAQLWDIHGNARLGIFKGHSCSLKAVDFQCHNQSVFATGARDGNVMVWDMRCNKRCGYHK
PVNTIHNCHTISSTVSGTPPRIRRRGRRPSSVVKPDSQQSVTSVIFQDYNTLISAGAMDG
TVKVWDLRKNYSNLEKAPLPCQAFPCPQKSHRKHGFSSLTLDSTKSRLFANCTNDVIYMY
DXVTFQKEPLAKFRGHSNVTFYVKSSVSPDDQYLLSGSGDYDGYIWKIDDPQAAPFHLLG
HTNEVTSVAWCPGNQSKVVTCSDDTSFYIWNVNYAERKNGNFVGWCEQVSPSETEDGIPG
SSDSGSPVSSKNNSTSTLTSLSLPSPTTTKCSSPQQLLYKWLQTSEVTVPNRVTKSSSIV
EQMNSVHSNGNKRSREVDNDLTLSKHVCMWDEVEKIGKSASNDPKTSNSVSSKIETQVEK
AESDIMDKENKVPNANIIVGSQPLKETKMETSLPLPVHRNIGSCLSSTSGLLNSISQMSP
TNSLLKETTVASEKKKFTHPIRKSNWLRDMGVKKKSVKTRNVVPSKLENISTNVDRVAVL
TNTRSITNYFTPMNHNSSN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgaattttctccgcagcttacacgaacggcgaataattcagtcgtattccccaaagccc
aggaatgtaagaatagactttgtcattcaagcattgaaatgccacaaagatgaccaacac
tacgtaaaaggtttagattcggagagagatgtaccaccatttgcttgcagtttcaatcaa
tctcttgtgtatggtcatatgttatcagttgctgatgaagaaggtggtgtgtgtctgtat
gatacaagaaaacatggtccttcggccagacttaaaggttgggttgcccacagcaatgca
atatttgatgttgcttgggttggcaatgaagccaaactagtgactgcatcaggtgatcaa
acagcccaattgtgggatattcatggaaatgcaagacttggaatttttaaaggacacagt
tgcagcttaaaagctgttgattttcagtgccataatcaatctgtatttgccactggtgct
agagatggaaatgttatggtttgggacatgcgttgcaacaaacgttgtggttatcacaaa
cctgtcaacacaatacataactgtcacaccatatcttcaacagtgagtggtacacctcca
aggattaggcgacgtggcagacgaccttctagtgttgtaaaaccagattcacaacaaagt
gtgacatctgtcatatttcaagattacaacacactcatctcagctggggcaatggatgga
actgttaaagtttgggatttaagaaagaactattcaaatctagaaaaggctccattacct
tgtcaagcctttccttgcccacaaaaaagccatcgaaaacatggcttttcatcattaaca
ttggactcaacaaagtcaagactttttgctaactgcaccaatgatgtaatctacatgtat
gacnntgttacatttcaaaaagagcccttagcaaaattcagaggccacagtaatgtgaca
ttttatgtcaagtcttcagtgagtccagatgatcaatatcttttaagtggctcaggtgat
tatgatggatatatatggaagattgatgatcctcaagctgcaccattccacttattgggt
cacacaaatgaagtcaccagcgtggcatggtgccctggaaaccaaagcaaggttgtaact
tgctcagatgacacaagtttttacatatggaacgtcaactatgctgaaagaaaaaatggg
aattttgtaggatggtgtgaacaagtttcaccatcagaaactgaagatggtatacccgga
agcagtgatagtggttcccctgtttcatcaaaaaataactcaacaagcacattaacatca
ctttctctcccatcaccaacaacaaccaaatgcagtagtccacaacagctgctctataag
tggttacagacaagtgaagttacagtcccaaacagagtgaccaaatcaagctcaattgtt
gagcagatgaatagtgttcattcaaatggtaataaacgatcaagggaagttgacaatgat
ctgactttaagtaagcatgtctgcatgtgggatgaagttgagaaaattggaaaaagtgca
tcaaatgatccaaaaacatcaaacagcgtttccagcaaaattgaaacacaagtagaaaaa
gctgagtcagacattatggataaagagaataaagttcccaatgcaaacatcatagtaggg
agtcagcctttgaaagaaaccaagatggagacctctttaccactaccggtacatagaaac
attggttcatgtttatcatcaacaagtggcctgttaaactcaatttcacaaatgagccca
acaaacagtcttttaaaagaaacaacagttgcatcagaaaaaaagaagttcacacatcca
ataagaaaatccaactggttacgagatatgggggttaaaaagaaaagtgtgaaaacaaga
aacgttgtgccatcaaagttggaaaatatttcaaccaatgtagatagggttgctgttttg
acgaataccagatcaatcacaaactattttactccaatgaatcataattcatcaaattaa
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