Xenia sp. Carnegie-2017 (soft corals): 124441863
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Entry
124441863 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124441863
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
124441863
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
124441863
NCBI-ProteinID:
XP_046848282
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MDPVDDLILSLGDVGNDEMIDTDASVIKENINPMVQETSEDFAAKLGYSKDLYAQAVKKV
GKEAGRNELLNELVKLKNSRKELNEEIPKERVDRRRSSISTIPVSRQLRPIIVDGSNVAM
SHGKQKFFSCKGIQIAVDWFILRGHKSIYVVIXRWRKESPSESNLISGQEVLKILEGAVS
MIYTPSRTVKQKRIACYDDRYILQIACERDGVVVSNDNFRDLYLEDRPEWKKIIEERVLM
YSFVDDMFMPPDDPHGRNGPHIDELLSFGGSTKTKVCHYGRHCTYGRNCKYAHPERDEGI
LRDTPSIVPRPYSEPVPHTDDDFLSENFKRLSMPDINPNQPPPIITRSRHIAQMAPALPM
RGPRQHAPPLPPRTTIHGGIHVTENPYAPLPISMEQQQMMYLARSQQPCLPPRRNQNYDA
LPFPCQMVSIPPHAQHHQYYNLPPQPGAYIANTNRNLRRGGPYDNLPPDGQMPVYPPRNH
AIYQQRFYKSRAPPVDESEEDTPPLPERKQGCYHKHMYEPEILRSLPKAVQYQNNGTESI
MHTMVNVAQG
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggatccagtggatgatttgattttaagtcttggagatgttggcaatgatgaaatgata
gataccgatgcttctgttatcaaggagaacatcaatccaatggtacaagaaacatcggag
gatttcgccgcgaaactgggctacagtaaggatttgtatgcgcaagctgtgaagaaagta
ggcaaagaagctggccgcaacgagttgttaaatgaactggtaaaactgaaaaattctcgt
aaggaattgaacgaagaaattccaaaggaacgggttgatcgaagacgaagttcgatttca
acaatacccgtttctagacagcttcgaccgattattgttgatggatcgaatgtggccatg
agccatggtaagcaaaagtttttctcctgtaagggcattcagatagctgtggattggttc
attttgcgtggtcacaaatccatatatgtggtcattncgagatggagaaaagaatctcca
tcagagagcaacctgatttctggtcaggaagtgttgaagatccttgaaggtgctgtgagc
atgatttataccccttcaagaacagtgaagcagaagcgcattgcttgttatgatgatcgt
tacatcctacagattgcttgtgaaagagatggagtggttgtttcaaatgacaactttcga
gatttatacctggaagatcgacctgaatggaagaagatcattgaggaacgggtgttgatg
tattcatttgtggatgacatgtttatgccaccagatgatcctcatggtagaaatggtcct
catattgatgagcttttatcttttggtggctcaacaaaaacaaaggtgtgccattacgga
cggcattgcacatatgggcggaattgtaagtatgctcatccagagagagatgaaggtatc
cttcgagacacaccatcaattgttccccgtccatattcagaacctgtacctcatacagat
gatgactttctaagcgaaaattttaagcgcctgagcatgccagacatcaacccaaatcaa
ccaccgccaattataactcgctccagacatattgctcaaatggctccagcgcttccgatg
aggggacccaggcaacatgcaccaccacttccgccaagaacaacaatccacggggggatt
catgtaactgaaaatccttacgcaccattgccaataagtatggaacaacaacaaatgatg
tacttggcacgttcacaacagccctgtcttcctccaagaagaaatcaaaattatgatgca
ttgccatttccgtgtcaaatggtatctatcccaccacatgcacagcatcaccagtactat
aatttgcctccacagccaggggcttacattgcaaatactaatcgaaatcttcgtaggggt
ggaccctacgacaacctacctccagatggccaaatgccagtgtacccgcctagaaaccat
gctatatatcagcaacgtttttacaaatcaagagcaccacctgttgatgaaagtgaggaa
gatactcctcccctcccagaaagaaagcaaggttgctaccataaacatatgtatgaacca
gaaattttgagaagtcttccaaaggctgtccagtaccaaaacaacggaacagaatccata
atgcacacaatggtcaatgttgctcagggttag
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