Xenia sp. Carnegie-2017 (soft corals): 124442202
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Entry
124442202 CDS
T08024
Name
(RefSeq) spastin-like isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124442202
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xen04812
]
124442202
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
124442202
Membrane trafficking [BR:
xen04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
124442202
Cytoskeleton proteins [BR:
xen04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
124442202
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_5
RuvB_N
AAA_16
AAA_22
TIP49
DUF815
NPHP3_N
Mg_chelatase
nSTAND3
AAA_14
IstB_IS21
NACHT
AAA_21
AAA_24
AAA_2
RNA_helicase
DUF5906
Bac_DnaA
AAA_7
Motif
Other DBs
NCBI-GeneID:
124442202
NCBI-ProteinID:
XP_046848643
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MASSGKEAKKKEDNENSTAVVAIRRHHKHAYAYLDKALSIEESDGKSVISKEQAVECYKK
GINELTKGIQIDCSGEGEEWERGRGLQSKMQKNLTTFQARLDELVSLIASQCKVDSKANS
KTNGAQPVFKTPLSKRPSSSKAPRNNIPGMRNGGTKASVEKCRPSQNPKLKRHVDKDPED
SPRSSFRPSTVSNDWKIELKRRVSKIKSFDEKIINQIVDEVVQNSSSITFEDVAGMDTAK
RLLQEIVILPALRPELFRGLRAPARGLLLYGPPGNGKTMLAKAVSHQAKSTFFNISAATL
TSKWVGEGEKLVRALFVIARELQPSIIFIDEIDSLLCERKEGEQESTRRLKTEFLLAFDG
ITSGENERILVMGATNRPQELDDAALRRFVKRVYLPLPDCKTRKILLVKLLEKQNNPLSN
KELDKLASLTENYSGSDLTALAKDAALGPIREMNPDELRRVSASKVRNLTLDDFVSSMNN
VRASVSPETLKIFENWTKTYGTQS
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagtggaaaggaggcaaaaaagaaagaagataatgaaaactctacggctgtt
gtagcgataagacgacatcataaacatgcatatgcctatcttgacaaagctctgagtatc
gaagaatctgatgggaaaagtgttatttctaaagagcaagcagtcgaatgctacaaaaag
ggaatcaatgaactcacaaaaggaattcaaattgattgtagtggagaaggtgaagaatgg
gaacgaggcaggggcttgcagagcaagatgcaaaagaatctaacaacgtttcaggcaaga
ttggatgaacttgtgtctctcattgcatcacaatgtaaagttgacagtaaagcaaattcc
aaaacgaatggtgcccagccagtcttcaagacaccattatctaaaagacccagctcttcc
aaagcaccaaggaataatattcctggaatgagaaatggtggaacaaaggcatcagtagaa
aaatgcagaccatcacaaaatccaaagctgaaacgacatgttgataaggatcctgaggat
agtcctagaagctcatttaggcctagtactgtgtcaaatgactggaagatagaattgaaa
agaagagtttccaaaataaaaagttttgatgaaaagatcatcaatcaaatagttgatgaa
gttgttcagaactcatccagcattacatttgaggatgtggctggaatggacacggcaaaa
cgtttgcttcaagaaattgttattttacctgctttgaggcctgagttgttcaggggtctt
agagcgccagcacgaggattattgctgtatggcccccctggtaatggaaagacaatgttg
gcgaaggctgtatcgcatcaagcaaaatcaacattcttcaacataagcgctgcgacactt
acgtcaaaatgggttggggaaggagaaaagttagtgcgagccttatttgttatcgctcga
gaactccagccatctattatatttattgatgaaattgattctttactgtgtgagagaaag
gaaggcgaacaggaatctactcgacgattgaagacggaatttttgttggcttttgacgga
attacttccggtgagaatgaaagaattttagtaatgggagcaacgaacagacctcaagaa
cttgatgatgcagccctaaggaggtttgtgaagagagtttatttaccactgccagactgc
aagactagaaagatacttctcgtaaagctgctagaaaaacaaaacaatcccttgtcaaac
aaggaacttgataaattagcaagtttgaccgagaattactctggtagtgacctaacagcg
ctcgctaaagatgctgcattaggacccattagagaaatgaaccctgatgaacttcgaaga
gtctccgccagtaaggtacgaaacctaactttggatgattttgtcagctccatgaataat
gttcgtgctagtgtgtcacccgagactttaaaaattttcgaaaattggaccaaaacatac
ggcacgcaatcgtaa
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