Xenia sp. Carnegie-2017 (soft corals): 124442224
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Entry
124442224 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124442224
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124442224
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
124442224
NCBI-ProteinID:
XP_046848669
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MFTPGEQRKAYLRYKNSEDCSFNNARFDSPSTPLTSIDPEDTEDEEQNGNNNTNPEADQL
KLAAIYDDEVKIKDILSACTGEEIQRLLSEPDETGQPCIFHALESRTRNSLTCLLNHVKG
TKSVVAENGETVLHVATRMGNVDILRHLLQYDFIVDLVNHVESINGRSPLHFAAMFNHVE
IAKVLLEHGGNITRVDITERSPLYIAAYRGHAEMLELFLENDKSAVKELLFGEKYGGSHY
RNILHVALDSGNERTVQVCLQQDGGIILPCLRDEINSNSYLIHAACNNGMDKVLSLFVDM
MEDLVVQQMMVKDKEGFTPLQLAAINNHSGVVRYIGSLSKGFLNEITKTSLSALVLAVDK
GHIEVVEELLKLKADFTIRDDSNRTVLHNATAHPEILRILLKKNDLMLSLINEKRADDGY
TPIHDAAYKGLIESVKILLEHGADLNVFSKTYQSPLHCAVISQKPDVVQLILCHEPGLIN
KVNDKKQAPIHTAAKHCNPDVVNCLLNSGATVLGDSKISTPLHIAAQYGHLNIIKLLLEH
KSSMIDLKNTDQRTALLEAACNGKADVVKYLLDNKAAITKDREFFNCLDWTIIKGDNDSA
MVMMCHERWKEIMNETKNGPEGTMAKLVSKNMSEVAYQALCNSRKSTGHPESVDYKVEYD
FMCLQNDALETRKAAKKLKPMTAIKAMLRHKSYKCLRHPVCCKYLKTKWMEFGWKMYSAG
LTLFLFFLVSLNVYAFGIPSYKATIIPNNSTKSYEIPHASINVKVATVFCLLSASIQILI
EIGQILLRRTNYFLDDVNVLEWVLYVSTFIFAVPSNDNISVKTSFQWKACSIALFCVWIN
LVIYLRRFASYGIIILMMKKIFFTLIKVLGLLIFFIVAFGAAFTVIMNDREEFRRFSVSI
LTTATMTMGEFNFKERFLGDRNEYNTFYPLQMTLLIIFIVLMAIIIINLMLALSIDDTSS
IMQRAKLQKHIQTAKMIIDMERKRYTFFTRRRVSFVDPLDEWPNRKDSFSRKLWGIIFYG
PDFSTDQVDENSEQMRKEDDTLVLIEMVKELQMQNAIFQKKVMASLEENGKPSKSIDASQ
VCNESEKSSRDTIVQFRRRLLKKKQENETTLNKSRLEELKRQHSRMNSEDVDDGVGDHTV
WKYES
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgccgggtgaacagaggaaagcttatctcagatacaaaaatagcgaggactgc
agttttaataacgctagatttgattctccctcaacaccactgacatccatcgatccggaa
gacactgaagatgaagaacaaaacgggaataataatacaaatcccgaagctgatcaacta
aaacttgcagcaatttacgatgacgaagttaagatcaaagatatattgagtgcctgcacc
ggggaggaaattcaaaggttactctctgaacctgacgaaactggacagccatgtatattt
catgccttggaatcacggacacgaaattctcttacttgcttgttgaatcacgtaaaaggc
accaaatctgtggttgctgagaatggagagaccgtacttcatgtagccacgaggatgggt
aacgtagatattcttcgtcatttgttgcaatatgacttcattgttgatctcgtgaaccat
gttgaaagcatcaatggccgctcgccacttcattttgcagcgatgttcaatcatgtggag
atcgccaaggtcttgctggaacacggtggaaatataacgagagttgatattacagaaaga
tccccattgtatatcgccgcttatagaggacatgctgaaatgcttgagctgtttctagaa
aatgacaaaagcgcagtaaaagagttgttgtttggcgagaagtatggtggaagtcattac
cgtaatatacttcatgttgctctggacagtggtaatgagcgtacagtacaagtttgtctg
cagcaagatggaggtatcatactcccttgtttgcgagatgaaatcaattccaacagttat
ttgattcatgccgcttgtaataatggcatggataaggttttgtcactatttgtggacatg
atggaagatttggttgtacaacaaatgatggtaaaagataaagagggatttactccatta
caactagctgcgatcaataatcacagcggtgttgtgaggtacataggatcactgtccaaa
ggttttctcaatgaaataacgaaaacctctttgtctgctttggtcctagcagtagataaa
ggtcacattgaagtcgttgaagaattattaaaactgaaagctgatttcactattcgcgat
gacagcaatagaaccgttcttcacaacgcaactgctcatcctgaaatattgaggattttg
ttgaagaaaaatgatcttatgctttcgttgataaatgaaaaaagagcagacgacggttat
actcccattcacgatgcagcttataaaggtcttattgagagtgtgaaaattttgctggag
catggtgcagatctaaacgttttctccaaaacttatcagtcaccattgcattgtgctgtg
atttcccaaaagcccgatgtggtgcaattgatactttgccatgaacctggtttgattaac
aaggtcaatgacaaaaaacaagctccgattcatacagcagcgaaacattgtaacccagac
gtcgtcaactgtcttcttaatagtggggcaaccgtactgggtgactcgaaaatatccact
cccctgcatattgcagcgcaatatggacatctaaatatcatcaaattattgctggagcat
aaatcttctatgatcgaccttaagaatacagatcaacggacagcattacttgaagctgct
tgtaatggaaaggcagatgtggtgaaatatttactggacaacaaagcagccattaccaaa
gatcgagaattttttaattgcttggattggaccattataaaaggcgataacgatagcgct
atggtgatgatgtgtcatgaaagatggaaagagataatgaacgaaacaaaaaacggtccc
gaaggaacgatggcaaagctggtctccaaaaacatgtctgaagtggcttatcaagctctt
tgtaacagcagaaaatccacaggtcacccagaaagtgtcgattataaagttgaatacgat
tttatgtgtttacaaaatgatgccttagaaacaagaaaagcagctaagaaacttaaaccg
atgaccgccatcaaagcgatgctacgtcataaaagctacaaatgtttacgtcatcctgtc
tgttgcaaataccttaaaacaaaatggatggagttcgggtggaaaatgtattcagccgga
ttaactctttttcttttttttcttgtttctcttaacgtgtatgcttttggtattccttca
tacaaagcgacgattattccaaataattcaacgaagtcttatgaaataccacatgcatcg
atcaatgttaaggttgcgactgtgttctgtcttctatctgctagcattcaaattttgatt
gaaataggtcagattttgctacgcaggacgaattattttctggacgatgtcaacgtttta
gaatgggtcctttacgtatcaacattcatctttgctgtaccaagtaacgacaatatctct
gtaaagacaagttttcaatggaaagcctgttctatagccttgttttgtgtttggataaat
cttgttatttacctaagaaggtttgcctcctatggaatcattattctgatgatgaaaaaa
atctttttcacattaatcaaggtcttgggacttttgatttttttcatcgtcgcgtttgga
gcagcttttactgtgataatgaatgacagagaggagtttcggaggtttagcgtgtccatc
ttaactacagcaacaatgacgatgggagagtttaattttaaagaaagatttctcggtgat
cgaaatgagtacaacacattttacccgctgcagatgacacttcttattattttcattgtc
ctcatggctatcattatcatcaaccttatgctcgccctttctattgatgatactagtagc
atcatgcaacgcgcaaagctgcagaaacacattcagacggctaaaatgattattgatatg
gaaaggaagaggtacacgttttttacgagaagaagagtatcgttcgtcgatcctttggac
gaatggcccaaccggaaagatagcttctctcgtaagctttggggaatcatattttatggt
cccgatttttccactgatcaagttgacgaaaactcggaacaaatgagaaaagaagacgac
acgttggtcttgattgaaatggttaaagagctgcaaatgcagaatgctatttttcagaaa
aaagttatggcaagcttggaagaaaacggtaaaccaagcaagagtattgatgcaagtcaa
gtatgtaacgagagcgagaaatcttcacgagatacaatagtccagtttaggcgacgtctt
ttaaaaaaaaagcaagagaacgaaacaactctgaataaatctcgtttggaggaattaaag
agacaacatagtcgaatgaattcagaagatgttgacgatggtgttggtgaccatacggtc
tggaaatacgaaagttga
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