Xenia sp. Carnegie-2017 (soft corals): 124442226
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Entry
124442226 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124442226
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124442226
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
124442226
NCBI-ProteinID:
XP_046848675
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MEMAILQNCRRNANLRHEDNVEGIVSSNSFHFPLKSLSDEIDTQDGKNDVEQLKLAAIYD
AYNGESVLHVATRMGDEGILRKLLENKLIARLVNHVESENGRSPLHFAAKFNHLEIAKML
LEHYGKITRIDTTERSPLYIAAYNGHAKMLDFFLKQGKYNVNDLRKVLYAAVNSGDESTV
KVFLEHHDDIGRDYLQEEINDSYLIHKICKKGMENILSQLVSKAEDIVAQQMKRRDEQGF
TPLHQAVINDRSGLVRYIGSMNMDFVNEKTEKSQSALVLAAERGYQQVVEELLDLNADFN
IRDGSNGNRTVLHYAIAYPEILKILLKKNDRILLLINAKREGGGYTPIHDAAYNGLLESV
RILLEHGANPNVFSTSYRTPLYCAVLSQNSDVVELILVHKPALINKVDDTWQTPLHTAAK
TNSSEVVKCLLNNGAIMLTDKDKSTPLHIAAQHGQLDIVKLLVEHKRSMIDRENDKKRTA
LLEAASHGKINVVKYLLDEEAAITKDGELFGCLDYAILNGDKDNAIAMVCHDKWDEIIEK
TMYGPQGTMANLISKKMSEVAYQVLCKSMIPENHPKCENYKVKYDFKYLQNNPSETSEGT
KKFKPLTAIKNMVLFKSYKCLRHPVCCKFLEEKWKELGCGLYMIRLFFYMAFLISLNVYA
TNIPPYNPSVKSTELPEANIDVKAAMVICLVFTGIESLNEIIQILVNLKAFMNYLLDPVN
LLQWILYAMTIIFAVPCHENIAAKTSSQWKACSIALFCAWINLAMYLRRFASYGIIIQMM
WKILLSTMKVMLLLICFMVAFAAAFTSIMHDRELFKNFGYSLLTGAMMTLGEFNFQDTFL
GDRGHFNTFFLLQLCFLSLFIIIMPIIVMNLLLALAIGDTSKIMQDAKLQKHIQTAKMII
DIERKKYIPWMKTCFKQSKMFVKEEPNKKHGLLHKFWEIIFYGPDFSSDPVDEAFENIGK
NDNMSKRENCKPDCKQSQETLQKNKENESTVEDSRRFFQES
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggcgattctacaaaattgtcgtaggaatgccaacttgcgacacgaggataac
gtggaagggattgtttctagtaattcatttcatttcccgttgaagtcattgagtgatgag
atagacactcaagatggaaaaaatgatgttgaacaattgaaacttgcggcaatttacgat
gcttataatggagaaagtgtgcttcatgtagccacgagaatgggtgacgaaggtattctt
cgtaagttgttggaaaataaattaattgctcgtcttgtaaaccatgtcgaaagtgaaaat
ggtcgatcaccacttcattttgccgcaaagttcaaccatctcgagatcgctaagatgttg
ttggaacactatggaaagataacacggattgacaccacagaacgatctccattgtacatt
gctgcttataacggccatgctaaaatgctcgacttttttctaaaacaaggaaaatacaat
gtgaatgacctccgcaaagtactttatgctgctgtgaacagtggagatgaaagtacagta
aaagtctttcttgaacatcatgatgatatcggccgagactatttacaagaagaaatcaat
gatagctatttgattcataaaatttgtaaaaagggaatggagaatattttgtcacaatta
gtgtcgaaggcagaagatatagttgctcagcaaatgaagagaagggatgaacagggattt
actccactacatcaagctgtaatcaacgatcgaagcggtcttgttaggtacataggatca
atgaacatggattttgtaaatgaaaagacggaaaagtctcagtctgctttagtcctcgct
gcagaacgtggctatcagcaggtcgtcgaggaactgctggatctgaatgctgattttaac
atccgcgatggcagcaatggaaacagaacagttcttcactatgcaatcgcttatcctgaa
atattaaaaattttacttaagaaaaacgatcgtatccttttattgataaatgcaaaaaga
gaaggtggtggttatactcccattcatgacgcagcttataacggacttcttgagagtgta
agaattctgctggaacatggcgctaatccgaatgtcttctcgacgagttatcggacacca
ttatattgcgctgttctttctcagaactctgatgtggttgaattaatcctcgtccataaa
ccagctttgatcaacaaggtcgatgatacatggcaaaccccgcttcatacagcagcaaaa
acaaatagctccgaggtcgtcaaatgtctactgaataacggagcaatcatgttaaccgac
aaagataagtctactcctcttcatatcgcagcgcagcacggacaactcgacattgttaaa
ttattggtagagcataaacgttccatgatcgatcgcgagaacgacaaaaaacgaacagca
ttactcgaagctgcttcacatggcaaaataaatgtggtgaaatatttattggatgaagaa
gcagccattacgaaagatggtgaattatttggctgcttggattatgccattttaaatggc
gataaagataatgctattgcgatggtgtgtcatgataaatgggatgagataatagagaaa
acaatgtatggtccacaaggaacaatggccaatttgatttcgaaaaaaatgtcagaggtg
gcatatcaagttttgtgtaaaagcatgatacccgaaaatcacccaaaatgtgagaattat
aaagtcaaatatgactttaagtacttacaaaataatccctcagagacaagtgaaggaact
aaaaaattcaagccgttgaccgctatcaaaaatatggtactttttaaaagctacaaatgt
ttacgtcatcctgtctgctgcaaattccttgaagaaaagtggaaagaacttggatgtggg
ttgtatatgatacgcttgtttttctacatggcatttctaatttctctgaacgtgtatgca
actaatattcctccatacaatccatcagtaaaaagcacagaattaccagaagcaaacata
gatgttaaggcagcgatggttatttgtcttgtttttactggcattgaaagtttgaatgaa
ataattcagatattggttaacttgaaggctttcatgaattatcttctggatccagtcaac
cttttgcaatggattctctacgcaatgacaatcatctttgctgtaccatgtcatgaaaac
atcgctgcaaagacaagttctcaatggaaagcttgttctatagcgttgttttgtgcttgg
ataaatttagccatgtatctaagaaggtttgcctcttacggtatcattattcaaatgatg
tggaaaatcttactctcaacaatgaaggtgatgctgcttttgatatgtttcatggtcgct
tttgcagcagcttttacgtccatcatgcatgacagagagttgttcaagaactttggctat
tctctgctaactggagcaatgatgacattgggagaatttaattttcaagacacgtttctt
ggagaccgcggtcatttcaacacatttttcttgctacaattgtgctttcttagtttattt
atcatcatcatgccaatcattgtcatgaaccttttgctcgcgcttgcgattggtgatacc
agtaaaattatgcaagatgctaagctgcagaaacatattcaaactgcgaaaatgattatc
gatatcgaaagaaaaaagtacataccttggatgaaaacttgttttaaacaaagcaaaatg
ttcgtaaaagaagaacccaacaagaagcacggcctccttcataagttttgggaaattata
ttttatggacctgatttttcgtccgatccagttgacgaggctttcgaaaatattgggaag
aacgataacatgtcgaagcgcgaaaactgtaaaccagattgtaaacagagccaggaaact
ttacagaagaacaaagagaatgaatcaactgtggaagattctcgccgttttttccaggaa
tcgtag
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