Xenia sp. Carnegie-2017 (soft corals): 124442229
Help
Entry
124442229 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124442229
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124442229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
124442229
NCBI-ProteinID:
XP_046848686
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MANYVRSRWHVGFPRRQRSVDYDLSSEVNRDALARLKPIDEQGTIELAGSIPIVSDVDEN
GSKVQKSLADQLKLAAIYDDQKTITNILREKRSDREIQTLLSKTDERGQPCIFYALEWRS
LNSLTSLLNYAKDPKCVIAKNGESVLHVATGMGDVDFLHNLLQHDFIVDLVNHVESENGQ
SPLHFAATFNHVEIAKVLLEHGGKITKVDIIGRCPVYIAAAKGHANMLELFLKHEKSRVQ
ELLFREKYGGMFNSNILQIAVDSGDERTVQVCLQDEDVIREDLREEIRHGDGYLIHAACE
NGMKKSLFRFMEVMGHLDFLQLGRKDIEGFAPIHKAAVNDHSDIVSYIGSQSKIFLNEKT
KNSQTALVLAAERGHVRVVEELLKLKADFTLRDDSNRTVLHYAIAYPETLRILLKKKDLV
PLLINEKEIDGYTPIHNAALKGLLESVRILLEYNADLNVFTNNFRSPLHCAVSSQNSDVV
ELILANEPALINKVDADRETPLHTAAKYSSPEVVKCLLNNGAITMKDGELFSPLHIAASK
GHLTIVELLVMFKPSMINWKNKYKRTALLTAAEKGKADVVKYLLDNMAAITEDYELFNCL
DWAIINGDTKSAMVMMCHDKWKEIISTTKNGPEGTMAKLISNNMSEVAYRALSNSMKTTG
HPGSTDYLVEYDFLCLQTAGVVSKLSYIENKDRLLNLNIIKRKISKNVKKLRMLQFS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattacgtgagatcgcgttggcacgtgggctttccacgacgccagagaagcgtg
gactatgatttatcaagtgaagtcaatcgtgatgccctggccagactgaaacccattgat
gagcaaggcacgatagaacttgcagggtccattcccatagtgagtgacgttgacgaaaac
gggagtaaggtgcaaaagagtttagctgatcaattgaaactggcggcaatttatgacgac
caaaaaacgatcactaatattttgagagaaaaaagaagtgaccgtgaaattcaaacatta
ctctcgaaaactgatgaaagaggacaaccatgtatattttacgctttggagtggcgtagt
cttaattctcttacttccttgttaaattacgcaaaagaccccaagtgtgtgatagctaag
aacggagagagtgtacttcatgtagccaccggaatgggtgacgtagattttcttcataac
ttgttgcaacatgacttcattgttgatcttgtaaaccatgttgaaagcgagaatggccaa
tcgccccttcattttgccgctacgttcaaccatgttgagatcgccaaggtgttgctagaa
cacggtggaaagataacaaaggttgatatcataggaagatgtccagtgtacatcgctgct
gctaaaggacatgctaatatgcttgaacttttcctgaaacacgaaaaaagcagagtgcaa
gagttattgttcagggagaagtatggtggcatgtttaacagcaatatacttcaaattgct
gtggacagtggtgatgaacgcactgtacaagtttgtctgcaagatgaagatgtgattcgt
gaagatttgcgcgaagaaatcagacatggagatggttatttgattcatgcggcttgcgaa
aatggcatgaagaagagtttatttcgatttatggaagtcatgggacatttggacttcctt
cagttgggaagaaaggatattgaaggattcgccccgattcataaagccgcagtcaatgat
cacagtgatattgtctcttacattggatcacaatccaagatttttctcaatgaaaagacg
aaaaactcccagactgccttggtccttgccgctgaacgcggtcatgttcgtgtcgttgaa
gaactgcttaaattgaaagctgattttacccttcgtgatgacagcaatagaacggttctt
cactatgcaattgcatatcctgaaacattgagaattttgctgaagaaaaaagatctcgtg
ccgttgcttattaacgagaaagagatagacggttatactcccattcataatgccgcctta
aaaggattacttgagagtgtccgtattttgttagaatataacgctgatctgaatgtcttc
acgaacaattttcgttcgccattacattgcgctgttagttcacagaactctgatgtggtt
gaattaatcctagccaatgaaccagctttgatcaacaaggtcgatgccgacagggaaaca
ccgcttcatacagcagcgaagtacagtagcccagaggtcgtcaaatgtcttctgaataac
ggagcaattacaatgaaggatggagaattgtttagtccacttcacatcgcagcgtccaaa
ggacatcttactattgttgaattgttggtgatgttcaaaccttccatgatcaattggaaa
aataaatacaaacgaacagcattgcttacagcagctgagaaaggcaaagcagatgttgtg
aagtatttgctagataacatggcggcaattacagaagattatgagctctttaactgcttg
gattgggccatcataaatggcgatacaaaaagcgctatggtgatgatgtgtcatgataaa
tggaaagagattatttccacgacaaaaaatggtccagaaggaacgatggcgaagttgatt
tctaacaatatgtccgaagtggcgtatcgagctctttctaacagcatgaaaaccacagga
cacccagggagtactgactatttggttgaatacgactttttgtgtttacaaactgcaggt
gtggtgagcaagctatcttatatagaaaataaagatcgacttttgaatcttaacataatc
aaaagaaaaatctcaaaaaacgttaaaaagttgagaatgctacaattctcatag
DBGET
integrated database retrieval system
