Xenia sp. Carnegie-2017 (soft corals): 124442297
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Entry
124442297 CDS
T08024
Name
(RefSeq) transcription factor Sox-18A-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xen03000
]
124442297
Transcription factors [BR:
xen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124442297
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HTH_24
SPATA9
Motif
Other DBs
NCBI-GeneID:
124442297
NCBI-ProteinID:
XP_046848752
LinkDB
All DBs
Position
Unknown
AA seq
223 aa
AA seq
DB search
MSSRQGHIRRPMNSFMVWSREKRCEILKSNPGMSNAVISKKLGMTWKGMTAEDKKPYIEE
AKRLTWKHKQDHPDYKYRPRRHSKGKNRNKCDASSLKETGIQLPSEWSEFQNKPAHCTKQ
QPVLHVSTFQHDLRPVPFILPDKDTARLYLSYPGRTSFSPFVYSAAAPLSSSVVCVNDVI
SSYGQIASIKQPVISMTYKSSFSPTLFSNPLDRKHFVLNGQVR
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgagttcccgtcaaggccacattcgtcgccccatgaacagttttatggtgtggagtcgg
gaaaagcgatgcgaaattctcaaaagcaacccaggaatgagcaatgctgtgattagtaag
aaactgggaatgacttggaaaggcatgacagcagaggataaaaagccgtatatagaggaa
gcaaagcgattgacatggaaacacaaacaagatcatcccgattataagtacagaccaaga
cgacatagtaagggcaagaatagaaacaaatgtgatgcttcaagcttaaaagagactgga
atacaacttccatctgaatggagtgaatttcaaaataaacctgcacattgtacaaagcag
caacccgtacttcatgtatcaacgtttcaacatgatttacgaccggtaccgtttattcta
ccagataaagatacagcacgattgtacctctcgtacccggggcgtacatcattttctcct
ttcgtctactcagctgcagctccacttagctcatctgtggtctgcgtgaatgatgtaata
agctcttatggccaaattgcttcaatcaaacagccagtaatatcgatgacatacaagtca
tctttttctcccacattgttttcgaatcctcttgatagaaagcattttgtgttaaatggc
caggttcgttaa
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