Xenia sp. Carnegie-2017 (soft corals): 124442345
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Entry
124442345 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
xen03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124442345
03015 mRNA surveillance pathway
124442345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124442345
03041 Spliceosome [BR:
xen03041
]
124442345
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124442345
Spliceosome [BR:
xen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
124442345
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Lipase_GDSL_2
Lipase_GDSL
DUF2487
Motif
Other DBs
NCBI-GeneID:
124442345
NCBI-ProteinID:
XP_046848805
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MDAGFFRGTSSEQDNRFINKQKKLLKQMRFDDSLNEKVDMEKVNLDTIKPWISTRVIELL
GTDDDVLLEFIINMLEKEQHPDPKTMQINLTGFLNGKNARVFMKELWELLLSAQNNIGGI
PTMFLEKKKEEIRQRKMEQERIQANLSEKLDTTEQLEPDSTNAERLENEDKEDDERKKKN
ESGSESDEHNKNKNSGVISSFQTRRNRLASSNAPTVIPSKRIKAGWLEDHMGFKKLVSRG
ADPDVLLIGDSLVKGLARYQSVWRKHFGDMSCLNLGIGGDRVQHVLWRLKHGELDCDPKI
IVLHCGTNNIGKDSPKEIAEGLLTCVDQISEDCPHTRTIVTGLLPRDLEPSDYRKDIAEV
NKLLMENIEFSDEMKNVFFLETEKDWILETGRLNESLYFTDCLHLVEAGDEKFAKAIRGK
IDEVLKNIESTKEKNKDKKDKDTKRRRRSYSRSDSRSPSSRRRSRSPSTRRRSRTPRKRS
PSPRKRSPRRRSPSPRRRKRSYSRSPSRSRTRSPVRRRSPPRRSYSRRSPYRSRRYSPPR
RSPPRRRSRSPRPSRKSRSPSPRPVRRGRSPSKSRSYSSASSKSSRSPSVAKGEKKRKDK
VEVEAKKEKVREENFESEKKVEEDDEEQEDIDSKKEKKKDTKKKKIKAREDSESDYSSDT
KTKPDKDSSKKNKNRNYRRHSPTSSDSDRSDRERSPDRRDRRRRPSPRRRESSPRRRRNS
PPRRRDYSPPRRSPPRKDREPLRRRRMSSEDDSRRRRRQYSRSPMRQKKRERSQSLESPP
KKRARSPPQKTRKASSSPSPQRKEKPKPRKQREPSSSDSERSPSPQPKPTSQSRKNSRKT
LLPASKDVEKARNQARNNAKSLHLVAGNIETTLRKCLPGNHVKNRQNHEKKNAMICLKSA
KNVTMILSIIVVKTASEVSGRFVIRSRCSGKIYRRYIGERRRCVCEEEPKIWRFVWKENE
NGTTGNGDATGKIQKISATKSSSFQSSARAIRXCQKKRKKVKMSEVKQTLTRKLLQTKKD
RKTKRRSASPPAEDKESSGEEKDEKSE
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggacgctggtttctttcggggcacgagctccgaacaagataacagatttatcaataaa
cagaaaaaattgttgaaacaaatgagatttgatgattcgcttaacgaaaaggttgatatg
gaaaaagtgaacttggacactataaaaccatggataagtactcgtgtgatagagctattg
ggtactgatgatgatgtcttgttggagtttattattaatatgctggagaaggaacagcat
cctgatcccaaaacaatgcagatcaatctgacaggatttctaaatggaaagaacgccagg
gtgtttatgaaagagctgtgggaacttttgctgagcgctcagaataatattggtggcatt
ccaaccatgttcttggagaagaaaaaagaggagattcgacagagaaagatggaacaggag
agaatccaggcgaacctcagtgagaaacttgacactactgaacaacttgaaccagacagt
acgaatgcggagcgattggagaacgaagacaaggaagatgatgagaggaagaagaaaaat
gaaagcggatctgaatctgatgaacataacaagaataagaattccggtgtgatcagttca
tttcagacgaggcgcaatcgtttggcgtcttctaatgcgcccacggtcataccttccaaa
cgcatcaaggccggctggctcgaagatcatatgggttttaagaaattagtgtcacgagga
gcggaccctgacgtcttacttatcggggattctttagtcaaaggtctagctcgttatcag
agtgtttggcgaaaacattttggcgacatgtcatgccttaatcttggtattggtggcgac
cgcgtacagcatgtactgtggcgcttgaagcacggtgagctggactgcgatcctaagatc
atcgttcttcattgtggcaccaataacatcggcaaggattctcccaaagagattgccgaa
ggtcttctaacttgtgttgatcagataagcgaagattgcccgcacacccggactatcgtt
accggcttattaccccgggatcttgaaccctccgactatcgtaaagatattgccgaagtg
aataaattgttgatggagaacatcgagtttagtgacgaaatgaaaaatgtcttctttctc
gagaccgagaaggactggatactagaaacaggtcgcctgaacgaaagcctctatttcacg
gactgcctgcatctagtggaggcgggcgatgaaaaatttgccaaagccatacggggcaaa
atcgacgaagtccttaagaatatcgaaagcacgaaggagaagaacaaagataagaaagat
aaagatacaaagagacgaaggagatcctactctcgctctgattctcgttccccatcctcc
cgtcgtcgctcacgttcgccttcaactcgtcgtcgctcgaggaccccacgtaaaaggtcg
ccatctcctcgtaagcgttcgccacgtcgacgctccccgtcaccaagaagaagaaaacga
agttactccagatctccttcgagatcaagaacgcgttcgcctgtccgtcgtagatctccg
cctcgaagatcgtactcacgacgctctccgtacagatcccgaagatattcacctcccaga
cgttcacctccgagacgacgctccagatcacctcgaccatctcgaaaatcgcgttccccc
tctcctcgacctgttcgtcgcggacgttctccttccaagtctcggtcttattcttctgca
tcttcaaaatcgtcgcggtctccttcggttgcgaaaggagaaaagaaacggaaagacaaa
gtggaagttgaagccaagaaagagaaagtccgcgaggaaaattttgaaagtgagaagaaa
gtggaagaagatgatgaagaacaagaagatattgactcgaagaaagaaaagaagaaagac
acaaagaagaaaaagatcaaagcaagagaagacagtgaaagtgattactcatcagatacc
aaaacaaaaccggataaagattcttcaaagaaaaataagaacagaaattatcgtcgccat
tctccaacgtcttcagattcagaccgcagtgatcgggaacgctcgcctgaccgtcgtgat
cgccgacgtcgaccgtcccccagacgtcgagagtcttcaccgcgcagacgcagaaacagc
cctccccgcagacgggattattcgcccccacgaagaagtcctccacgtaaagaccgcgaa
cctttacgtcgtcgacgaatgtcttccgaagatgactcgagaagacgacgacgccaatat
tctagatcaccgatgagacagaagaaacgcgaaagatctcaatcgcttgaatcacctcca
aaaaaacgagcacgaagtcctcctcagaaaacccgcaaggcttcttcatcgccctcacca
cagcgaaaggaaaaacccaaacccagaaaacaacgcgagccttcaagttctgactccgaa
agatccccatctcctcaacctaaacccacttctcaatcaagaaaaaactccaggaagact
ctccttcccgcaagcaaagacgtagagaaagcccggaatcaggcaagaaacaacgcaaag
agtctccacctagtcgcaggaaacatagagacgactctccggaagtgcttacccggaaat
cacgtgaagaaccgacagaatcacgaaaaaaagaacgcgatgatttgtctgaaatccgcc
aaaaacgtcacgatgattctgtcgataatcgtggtaaaaacagcgtcggaagtctccgga
agattcgtcatccgaagcagatgtagtggaaaaatataccgaagatacatcggagagaga
cgaagatgtgtctgcgaagaagagccgaagatctggcgattcgtctggaaagaaaatgaa
aacggcacgaccggaaacggagatgcaacaggtaaaatccagaagatctccgccaccaag
tcctcgtcgttccagtcctccgcccgagcaatcaggtgatgtcagaaaaagaggaagaag
gtaaagatgagcgaagtgaagcaaacgttgacgaggaagcttcttcagacgaagaaagat
agaaaaacaaaacgtcgatccgcatctccaccggcagaagataaggaaagctcgggtgag
gaaaaagatgaaaagtcagagtag
DBGET
integrated database retrieval system
