Xenia sp. Carnegie-2017 (soft corals): 124442370
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Entry
124442370 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: patched domain-containing protein 3-like
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sterol-sensing
Patched
MMPL
ACR_tran
FAM176
Lock_Gag1-like
Motif
Other DBs
NCBI-GeneID:
124442370
NCBI-ProteinID:
XP_046848827
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MSRLSCWKRYNPWQGYLKLCRFCNDTISRFFSFLGEKVGKYPSKTILLAVFFMAISASGF
AFFRVENRTEILYAPKDSESVKNLRKANNYGFYDPARRAEIIILGKNESNVLTEECFIEA
FQLHEAIVSIPRYKSVCLPNIKSDPLAATSYCKREEPFWMFNYSQNFVNLLPTLNNYTNT
SGRLFSRILGKAKYSRNGSILSAKGLRFVYNIRGVEIGDDVDQSSEDWEKEFLKKMESYP
PLDCGSLVYNAERSIDEAIAESTGNDVKLVSLTFTIMISFACFMLGKYRNPLTGHGLLAF
GGILCVGFGILTGFGFSMLVQTPFTSIVGILPFLVIGVGIDDMFIIVDELDRSEPDQNIP
KRLGIVMKTVGPAVTMTTLTDSLAFAVGASSRFLSIVYFCTFAALAISFAFVFLMTMFVA
FMSYDCRRMLDGRRDMFPFIKAPPPPPGKSRWDEPLPQMSNKFMEYWGNFIMKPPSKVII
ALVSMALLGAGIYGTTFLKEDFDRRNLAKDGSIYIQFLDTVEKYFNTDAPVDIIVESGVN
YSNPLTQSELSSLMGIVRENKYFRPDIVSWFTELQKWRNKTRNKTENVLDSLDDFCLVTH
SSGKISSLLDNTTILSSRFYCYMIGTSRSVILRKALESFRKDLKDKLSIPIFASSYQFIY
IEQFIAIQSETTRSLVIAAIAITIATSFFLVNPLVILLVLVGFVSLIFELLGFMYICGVS
LNSISMINLVMAIGFAVDYSAHVAHSFVFSTENNPEQKVIEALRTTGASVIMGGFSTFLG
MVVTAFASSEIFRIFFRMFVGIVVLGLLHGLCFLPVWLSIFCRWHINVHPEDDDDVKQNS
PAKRDADKDHPSSKNNSVMIKNEAENNNANEARNNSANEVGNNNANEVGNNNANETGKNN
SVSPLEMSMPSVNGIETAR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagactttcttgttggaagcgttacaatccctggcaaggatatcttaaactatgt
cgtttttgcaacgacacaatctctcggtttttttcttttcttggtgagaaagttggtaaa
tatccctcgaaaacaatcctactggcggttttctttatggcgatttcagcatctggattt
gctttttttcgcgtggaaaacagaacagagatcttgtatgctcctaaggacagcgaatca
gtaaagaatctgagaaaggcaaacaactacggtttttatgaccctgctagaagggcagag
ataattatattaggaaaaaatgagtcaaacgttttgacagaagagtgttttatagaagca
tttcaacttcacgaggcgattgtttccattccacgatacaaaagcgtttgtcttccaaac
ataaaaagcgatcctttagcagcaacgagctactgtaaacgggaagaaccgttttggatg
tttaattactcgcaaaatttcgttaatttgttgcctacattgaacaattacacgaataca
agtggtcggctgttttcacggattcttggtaaagcaaagtacagcagaaatggatcaatt
ttgtctgcaaaaggattgagattcgtttacaacatcagaggagttgagattggtgatgat
gttgatcaatcctcagaggattgggagaaagaatttttgaaaaaaatggaaagttatccc
cctttagactgcggatccttggtgtacaacgcagaacgcagtatcgacgaagcaatcgca
gaaagtaccgggaacgatgtgaagcttgtatccttgacattcacgataatgataagtttt
gcgtgtttcatgttgggcaagtatcgtaatcctttgactggtcatggtttgttagccttt
ggtggtatactgtgtgttggctttggtattctaactggttttggtttttcaatgctggta
cagacaccgtttaccagcattgttggaattttaccatttcttgtcattggagttggtatc
gatgacatgtttatcatagttgatgagctcgataggtccgaaccagaccagaacattccc
aaaaggcttggcattgtcatgaagaccgtcggcccggcagtcaccatgacaacgttgaca
gactctctcgcatttgctgttggtgcttcatcaagatttttatccattgtctacttctgc
acattcgctgcacttgccatttcatttgcatttgtatttttaatgacaatgtttgtggct
tttatgtcatacgattgccgtcgtatgcttgatggccgccgggatatgttcccttttatc
aaagcaccacccccaccacctgggaaatctcgttgggacgagcccctaccgcaaatgtcc
aacaaatttatggagtactggggaaatttcatcatgaaaccaccttctaaagtgatcatt
gctcttgtatcgatggccttgttaggagctggtatttatggaacaacatttttaaaggaa
gattttgatcgtcgaaatttggccaaagatggttcaatatatatacaattcttggacaca
gtcgaaaagtactttaacactgatgcacctgttgatatcatcgtggagtctggagtgaat
tattccaaccctttaacgcagagtgaattgagtagtttgatgggaattgtgagggaaaac
aaatattttcgccctgacattgtatcatggtttacagaacttcagaaatggcgtaacaaa
actcgaaacaaaacagaaaatgtactggattctcttgatgatttttgcttagtcacccac
agttcaggaaagatatcttctttgctagacaatacaacgattctttcttcgcgattttat
tgttatatgatcggaacatcgcgttctgtaatccttcgcaaagctttggaatcctttcgc
aaggatttaaaggataaactaagcattcctatttttgcaagctcctatcaattcatctat
atcgagcagttcatagccatccaaagcgaaaccacgcgtagtcttgtcattgctgctatt
gccataactattgcaaccagtttctttttggtgaatccgctggtcattcttctagtgctg
gttgggtttgtgtctctgatatttgagttgctaggtttcatgtatatatgtggcgtttca
ttaaactccatctcaatgatcaacttggtaatggcgatcggttttgctgttgactacagt
gctcacgtagctcattcgtttgtattctccacggaaaacaatcctgaacaaaaagttatc
gaagctcttaggacgacaggggcaagtgtaataatgggcggtttcagtacgttcttagga
atggtggtaacagcttttgcgtcttcagagattttccgaattttcttcagaatgtttgta
ggaattgttgttctcggtctgcttcacggtctttgtttcctaccagtatggctatccatc
ttttgtcgttggcatataaacgtacaccctgaagatgatgatgacgtgaaacagaattca
cctgctaagagggacgcagataaagatcacccgtcatccaagaataactcagtgatgatt
aagaatgaagcggaaaacaataatgctaatgaagcaagaaacaacagcgctaatgaagtt
gggaacaacaacgctaatgaagttgggaacaacaacgctaatgaaacagggaaaaataat
tcagtttcacctttggaaatgtcaatgccatctgtcaatggcattgaaactgcgagataa
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