Xenia sp. Carnegie-2017 (soft corals): 124442744
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Entry
124442744 CDS
T08024
Name
(RefSeq) zinc finger protein ubi-d4 B-like
KO
K13196
zinc finger protein ubi-d4
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124442744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124442744
03036 Chromosome and associated proteins [BR:
xen03036
]
124442744
Spliceosome [BR:
xen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124442744
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124442744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
FeS
PHDvar_NSD
PHD_4
PRP21_like_P
PHD_2
zf_RING_Vps8
zf-C2H2_4
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
124442744
NCBI-ProteinID:
XP_046849186
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MAAKLGISSVRYKDALEQTTAYNSRLSFERKQRSPFLDSQTGVAQVSCYLWRSRLSRKAA
AYPYQLFTYPGRRWKRKPCTEPNEDVGESVAVEDCRSQATFDGGVPVGQLRTGNNQDIGH
GNVEENGEAYEMEAVDESEEESEEESDDDEESSFKRTGKSGRLMKKSLIKDDKEFKIKNY
TKEDLAKMSYEERQKPYVCEICGKRYKNGPGLKYHYTHYNHDQDGSSSETMEVNPLVTGL
PGSPSVEVSSQPSVITTTLAVTKETKSGIANPNDYCDFCLGDATKNRKTLLSEELLSCAD
CGRCGHPTCLQFTAKLTAKVKQYRWQCIECKSCTFCGTSDNDDQLLFCDDCDRGYHMYCL
NPPMSTPPEGSWICKLCEEDENMVGKQM
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaaattgggaataagtagtgttcgttacaaggacgctttggaacaaaccacg
gcctacaactcacgtcttagtttcgaaagaaaacaaagaagtccatttctcgactctcaa
actggtgtagctcaagtaagttgctatttatggcgtagtagactatctaggaaagctgct
gcatatccatatcagctcttcacttaccctggtcgacgatggaagcgtaaaccttgtact
gagccgaatgaagatgtaggcgaatcagttgctgtcgaagactgtcgttcccaagcaacg
tttgatggtggtgtccctgttggtcaacttaggactgggaataaccaggatattggacat
ggtaatgttgaggagaacggggaagcatatgaaatggaagccgttgatgagagcgaggag
gagagtgaagaagagtcagatgatgatgaagagtcaagctttaagaggacaggaaaaagt
ggacgattaatgaagaaaagtttgatcaaagacgacaaagaattcaagataaaaaactac
acaaaagaagatttagcaaaaatgtcatatgaagaaaggcaaaaaccatatgtttgtgag
atttgtggtaaacgttacaagaatggtccgggtctaaaatatcattacacacattacaac
cacgatcaagatggatcttctagtgaaacaatggaggtaaaccctcttgtaactggatta
ccaggatcaccaagtgttgaggttagctctcaaccatcagtaattactacgacattagca
gttacaaaagagacaaaaagtggtatagcaaatcctaatgattactgtgatttttgcctt
ggtgatgccacaaaaaacagaaagacattattgtctgaggaattattgtcttgtgcagac
tgtggtagatgtggtcacccaacctgcttacaatttactgcaaagctcacagctaaagta
aaacaatatcgttggcaatgcattgaatgtaaatcatgcaccttttgtggcacctcagat
aatgatgatcagttattgttctgtgatgattgtgacagaggctaccacatgtattgttta
aatcctccaatgtcaactccaccggaaggtagctggatatgtaaattatgtgaggaagat
gagaatatggtcggaaaacaaatgtga
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