Xenia sp. Carnegie-2017 (soft corals): 124442872
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Entry
124442872 CDS
T08024
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124442872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124442872
Spliceosome [BR:
xen03041
]
Complex C
Other components
Step II factors
124442872
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
eIF2A
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
124442872
NCBI-ProteinID:
XP_046849341
LinkDB
All DBs
Position
Unknown
AA seq
574 aa
AA seq
DB search
MDVLPKSLVSYQSDSSDEERSDNDKSKEVEKSIESTVNMDALKSKFLLNSAPIVDAKEGI
DWRRHIDPSMKEVTFNAKYDELFSASVGPQNPFKTKQQRAHKNMLSGYVEPAHISKFQFD
NQLKTFSSYGYALDPSDDTAHIEEKFVGDVEKAKDSKGLTVFEATKQRAGDKRKREDKGD
PGVIDGYKGPWSKFVDEETIAKPSEEESTILEEYELSKKNKSKKDDMKPSEEKSTLHIKD
AYDYQGRSYLHIPQDLGINLKSDTPPERCFLPKQHIHTWSGHTKGVSAIRFFPKSAHLLL
SCSMDCKIKLWEVYNNRRVVRTFNGHNKAVRDICFNNDGTSFLSAAYDRYCKMWDTETGQ
CLGRFTNRKVPYCVKFNPDEDKQHLFVCGTSDKKILTWDTRSNEIIQEYDRHLGAVNQIA
FVDQNRKFVSTSDDKSVRIWEWDIPVDAKYIAEPSMHSMPSITVHPNEKWLACQSMDNQI
MIFGIQNRFRLNRKKTFKGHMVAGYACQVNFSPDGRYVISGDADGKLFIWDWKSTKLYSK
FKAHDAVCIGCAWHPHETSKVATCGWDGLIKYWD
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcttcccaaatcgttagtgtcttatcaaagtgattcttctgatgaagagaga
agtgataatgataaatctaaagaagttgaaaagtcaatcgaaagcactgtcaatatggat
gctctaaaatctaagtttcttttaaacagcgcgccaattgttgatgctaaggaaggaata
gattggagaagacacatcgatccttcaatgaaagaagttacatttaatgcaaagtatgac
gaactcttttctgcttcggttggaccacaaaatccatttaaaacgaagcagcaaagagca
cataaaaatatgttgtctggctatgttgagccagctcatatcagtaaatttcaatttgat
aatcaactaaaaacattctcaagttacggttatgcattagatccaagtgatgacacagct
cacattgaagagaaatttgttggggatgttgagaaagcaaaggatagcaagggattgact
gtgtttgaagctacaaaacagcgggcgggagataagaggaagagagaggataagggagat
cctggtgtgattgatggatacaagggaccatggagtaagtttgttgatgaagaaactatt
gctaaaccatctgaggaagagtcaacaatacttgaggagtatgaattatcgaagaaaaac
aaatcaaagaaagatgatatgaaaccttcagaagagaaatccacattacacattaaagat
gcatatgactatcaaggaagatcatatcttcacattcctcaagatcttggcattaatctc
aagtcagatactcctccagaacgttgctttctaccaaagcaacatattcatacgtggtct
ggtcacactaaaggtgtttctgcaataagattctttccgaaatctgctcatcttctcctg
tcgtgtagcatggattgtaaaattaagctatgggaggtttacaataacagaagagttgtg
cgaacatttaacggccacaataaagctgttcgtgatatatgctttaacaacgacggaact
tcatttttaagtgcagcttacgacagatactgtaaaatgtgggatacggaaacaggtcaa
tgtttaggaagattcaccaacaggaaggtgccatattgtgtgaagttcaatccagatgag
gataaacaacatttgtttgtttgtggtacatctgacaagaaaatattgacgtgggataca
agatctaatgaaattattcaagaatatgacaggcatttgggtgcagtcaatcagattgcg
tttgttgaccaaaatagaaagtttgtgagcacgtctgacgataaaagtgtacggatttgg
gaatgggatattcctgttgatgctaaatatatagctgaacccagcatgcattcaatgcca
tcaataacggttcatcctaacgagaaatggttggcatgtcaatcgatggataatcaaatc
atgatttttggtattcaaaaccgctttcgattgaatcgaaagaaaacatttaaaggtcac
atggttgctggttacgcatgtcaagtaaacttctctcctgatggaaggtatgttatatct
ggtgatgccgatggtaagcttttcatatgggactggaaatcaaccaaattatacagtaaa
tttaaagctcatgatgctgtttgtatcggttgtgcgtggcacccacatgaaacatctaaa
gttgccacgtgtggttgggatggtttaataaagtactgggactaa
DBGET
integrated database retrieval system
