Xenia sp. Carnegie-2017 (soft corals): 124443494
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Entry
124443494 CDS
T08024
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1-like
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xen04054
]
124443494
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124443494
Pattern recognition receptors [BR:
xen04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
124443494
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
CARD_2
RIG-I_C
SLFN-g3_helicase
SWI2_SNF2
CARD
AAA_22
AAA_19
AAA_25
Microtub_bd
AAA_11
Motif
Other DBs
NCBI-GeneID:
124443494
NCBI-ProteinID:
XP_046849903
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MIKMQVDWKDICRRQRYFIREIDPLKVIRVMQDVLTPEDCENIRTACTNHGTIIAVQNHL
LERLKRRGPNSLPKFVLALRQTGQEHAAQLIDPKMKVSGVLSICGRDDRVLEPGVAADIR
VNIQLVDFADDQLQKVKKLCEKYEVSHSEDTLSLRQHFKSFLGEDTCDFISLVKTNWSEQ
MPLILIFRISNLDVACVLMKEYENGNLKSSIIKKLCSYNFGDICFQDLNFNLVIEPDESK
KVIETLNNSGDSVGVLVDGMEKLELKLRDYQDDLVKPALEGKNTIICAPTGSGKTFVAME
AIKQHVSSSRHKFVAFIVDNVSLVDQQECNLAQYLPESVGISSLCGSNSHAYSLPQLLEE
YQVIVLTAQVLVNSLKRDKTDAPGEKELTIGQFSLLVFDECHHAIKKHPYNEIMRFYLRQ
KLEKPNLSRPQIIGLSASLGIGTGNNGSGFSAEKHIMELCANLDVQEIKLYEGTQLASTR
IIPFSREQENAFRATVDSVMRRIEVMISEKDFEKSGSILTEVSDMKIGWWRCSRKNWGAI
FIACFEHLKEYNNSLMINEDVRSEDALRYLKENINYKSSTDMERNFVCYLTMLFRLSNAP
SQW
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatgcaagtcgattggaaagacatttgtcgaagacaacgttattttatccga
gaaattgacccattgaaagtgataagggttatgcaagatgttttaacaccagaagactgc
gagaatataagaacagcgtgtacgaatcacggaacgattattgctgttcaaaaccatttg
cttgagcgattgaaaagacgtggtcccaattcattgccgaaattcgttttagcattacgg
caaaccggacaagaacacgctgctcaacttattgatcctaagatgaaagtgagcggagtt
ctttcaatttgtggtagggatgatagagttctggaaccaggtgttgccgcagacatcaga
gtaaacattcaattggttgattttgctgatgaccagttacagaaagtaaaaaaattgtgt
gaaaaatatgaagtctctcacagtgaagatacattatcccttcgtcaacattttaaaagt
tttcttggtgaagatacatgtgactttatttcacttgtcaagacaaattggtcagaacaa
atgccattaattttaatttttcgtatttcgaaccttgatgtggcttgtgtactcatgaaa
gaatatgaaaatggcaacctcaagtcaagcattattaaaaagctttgcagttataacttt
ggagacatttgttttcaagatttgaactttaaccttgtcattgaaccagatgaatcaaag
aaagtgattgaaacactcaataactctggtgattctgttggcgttcttgttgacggtatg
gaaaagttggagctgaaactacgcgactaccaggatgatctcgtgaaacctgccttagaa
ggaaagaacaccatcatttgtgcaccaacagggagtggcaagacatttgttgccatggaa
gcgattaagcaacacgtgagcagctcgaggcataaatttgtcgccttcattgttgacaac
gtcagccttgtggatcaacaggaatgtaatttagcacaatatcttcccgagtctgttgga
atctcgagtctctgtggaagtaattcgcacgcatactctctgcctcaactccttgaggaa
tatcaagtgatagtattgactgcgcaggtcttggttaattccctgaagagagataaaaca
gatgcaccgggagaaaaggagctaacaattgggcagttttctctccttgtgttcgatgaa
tgccatcatgcaataaagaaacatccttacaatgaaatcatgcgattttatttgaggcaa
aaattggagaaacccaatttaagccgacctcaaatcattggtctctcagcctcgctcggt
attggaactggtaacaatggttctgggttttcggcagagaagcatattatggagctctgt
gcgaacttagatgtacaagaaataaagctctacgagggaacacaacttgctagtactcgc
attataccattttcccgggaacaagagaacgcgttcagagcaactgtcgattctgtcatg
cggcgaatagaagtcatgatttccgagaaagattttgaaaaatctggctccatcctcacg
gaagtcagcgatatgaaaattgggtggtggagatgctcaagaaagaactggggcgcgatc
tttattgcgtgttttgagcatctaaaagaatacaacaattctttaatgattaatgaagat
gtccgctctgaggatgcccttcgctatctaaaggaaaatataaactataagtcatcgacc
gatatggaaagaaactttgtgtgctatttgacgatgctgtttcggctatcgaatgctcca
tcccagtggtga
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