Xenia sp. Carnegie-2017 (soft corals): 124443541
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Entry
124443541 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124443541
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
90S particles
Other 90S particles
124443541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
HAT_Syf1_CNRKL1_N
Spt6_S1
Suf
OB_RRP5
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_19
UTP6_C
TPR_16
HAT_Syf1_M
ARM_TT21_5th
ARM_TT21
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
124443541
NCBI-ProteinID:
XP_046849950
LinkDB
All DBs
Position
Unknown
AA seq
1822 aa
AA seq
DB search
MSTPRETGRAKKRKFISESAGEKKVKSHRKNISNISTTTENEEEDFPRGGALSLTPLEIR
EAKNMAEKDVLFGAGRNLKKVGKGKKKKKVINEAVENDPMPNIRTTRNLNVDCLSSKKLC
KDVLILGVVEEVFEFEMVISLPSNLSGCVHITDINPVYTSLLEDDDSNNEMDHLTRLRTF
FPVGTQVRCIVVSTDSTKHGHSKIKLSINPDHVNCSLSAASLFPNMVVSGYVRDVEDHGY
SVSIGVKGVQGFLPDKDLKDKLNVGQILDFIISSISSDKRMIHLQINKKNSKKRPMTQKE
KMVFSNLLPGMFVKTTVKQISLHGIVVSFLGGFHGSVEILHLAEHDGNEGHQIDKTYPPM
AKVMCCITYIDPSNKTVGLSNLKHLINSEVVNFSGLNVGDIIEDSEIVRIDEKNGVALKL
KDRWPAYAHISRLSDEKIANIGKKFKTGSKHSCRVLSFNSMVGLALVTLEKSILEQPFIR
YKDIKPGLVVDGKIQSLLRSGMIVALSDHIRGYCQSFHYADVTLKHPEKKLYEGRXVKCR
VLEVNAEKKRLRLSNKKTLVKSEYPVITNLNDVQIGMKTHGFITSIQNYGCIVHFYNNVH
GLVPKVDLGLKSSEKASDAFYVGQVVTCVVTSCSSEKGKLKLSFNTSATPSLINSESLLP
GTLVNVEVVGRTDLGLDVQIKPSNTHAFIPLAHLSDSYSNCPSLLEIYSPVPGGEVKCLN
NVLFYGKDKQKSLIITRKQSLIKAASKRELVKHFEDLKVGMILSGFTRQLMPYGVFXEVS
PNIYGLAPNSLLSNGYVADASDHFKVGQSVMAMVTEIDYERHRLLVSLKSCDCYPNQSED
EKDRKESINLLVEYLKERDEIFDGLRHCYVVHAKVNSITNSGIKLLLENGVVGFAVPQLS
RGANLAVDKVLEAFVLDYDIEYKRLDLTVDSNVVTKRKDIKSKNKKKLNIGEIVSAVIQS
ICKEYLLVILPDHGLRIGYVAVRENMNDFRDPASRFKLGQTCKATVQKYVRSKIDKREYM
ILTVDVSEETGDTVHIGSIVNAIITSVKGVQLNVHIGAKKYKGRVCVSEITDDILQGKNP
LSLYSRGQKIQGKILGFRDSIKHNFLPITHRNFSKTYAELSMKASRLREDESDDSSQELK
SFEKKLEDYKEGERIFCFVKTICDRDIWMVVSTSINGKVRLVDVSTDMKVLKDVSKHFRI
GCGYFCTILNVNKEQKSLDLSMSALFFFRLSREKGDIIPGVITKILPHKGLAVQLPHKNY
GFVFLTDIADDFHEDPLNEYKVNQLISCYILELNKNGNMTLSIRASRTQPETKTEKIDKD
VQSFNDIEEGEILRGFVKAVSDVGVFVSLSKDIVGRVQIKNLSQYFVKNWKPLFPIGKLV
KGKILSIDPNSNHIEISLKGIDVGDKDPAPKPERRKNKRKLDMDEDFTDSENEDDKILKK
LRTEETDDDVHKSEKENEDVPCSDESESEEEDNNRPTLKIPGGFNWHSAVHDDKMAKHND
ERAANTEDDESNDGEENTETARKKSKRAKRAAKKXEEEFLYKTEQALLDKDLGAQTAEDF
DRILLSTPNDSLLWLQYMAYYLHMTEIEKARAVGERALKSISFREEDEKFNVWIALLNLE
NSYGTQDSLVKVFQRALEQNEPKKVFEHLVTIYKRSSKFEEAEQLYQTMIKRFKSSKSVW
VEYASFLMEQGELKSSRDLLQRCLKSLERRKHVETIAKFALLEFKYGETERGKTVFDNVL
TSYPKRTDIWSIYVDVLTKNGDINAARRLFDKAVTKKLSSKKMKFIFKKYLEFEKKHGDE
STVIKVKKIAEEYVKDKTDNEL
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactccacgtgaaactggaagagcaaagaaacgaaaattcatttcggagagtgct
ggcgaaaagaaagtaaagtcacatagaaagaacatcagtaatatttcaacaacgacagaa
aatgaagaggaagacttccctcgtggtggtgcattatctctcacaccactcgaaattagg
gaagctaagaacatggctgaaaaggatgtcttgtttggggctggaagaaatttaaaaaaa
gttggtaaagggaaaaagaagaaaaaagttattaatgaagcagttgaaaatgatccaatg
ccaaacataagaacaaccaggaacttaaatgttgactgtctttcttcaaagaaactttgt
aaagatgttttaatacttggtgttgttgaagaagtatttgaatttgaaatggtgatcagc
ttgccaagtaatctcagtggttgtgttcatatcacagacatcaatcctgtctatacgtcg
cttcttgaagatgatgattctaataatgaaatggatcatttgacgcggcttcgaaccttt
tttcctgttggtacccaagtgagatgtattgttgtgtctactgattcaaccaagcatggt
catagtaaaataaaactctcaatcaacccggatcatgtcaattgctctttaagtgctgcc
tctttatttccaaatatggttgtatctggttatgtacgtgatgtggaagatcatgggtat
tctgtatcaattggggttaaaggtgtacaaggatttttaccagacaaggacttgaaggat
aaactgaatgttggtcaaattttggattttatcatttcctccatcagctcagataaaaga
atgatacatctacagattaataaaaagaatagcaaaaaacggccgatgacacaaaaagag
aagatggtgttttcaaacttgttgccaggaatgtttgtgaaaacaacagtcaaacagata
agtttacatggtattgttgtgtcatttcttggtggatttcatggctcagttgaaattctt
catcttgctgagcatgatgggaatgaaggccaccagatagacaaaacctatcctccaatg
gcaaaggttatgtgttgtataacctacattgatccgtcaaacaagactgtaggactgagt
aatcttaaacacttaatcaactccgaagtcgtgaatttttctggtttgaatgttggtgat
ataatcgaggactctgaaatagtgagaattgacgagaaaaatggcgttgctcttaagttg
aaggatcgttggccggcatatgctcatatttctcgtttgtccgacgaaaagattgcgaat
attggcaagaaatttaaaacaggaagcaagcacagttgtcgagttcttagtttcaattct
atggttggattagcattggtgaccttagagaagtctatcctggaacaacctttcattcga
tacaaagatatcaaacctggtcttgttgttgatggcaagattcaaagtttgctaagatct
ggaatgatcgtcgctctgtcggatcacatccggggatattgtcagtcatttcattatgct
gatgtcactttgaaacacccggagaaaaagctctacgagggaaganaagttaaatgtcgg
gttcttgaagttaacgccgagaagaaacgccttcgtttgtcgaacaagaagactttggtg
aaatctgaatatcctgtgatcaccaatctcaatgatgtccaaattggaatgaaaacacat
ggatttataacatcaatacaaaactatggatgtattgttcatttttataacaatgttcac
ggtcttgtaccaaaagttgacctaggtcttaaatcaagtgaaaaagcaagcgatgccttc
tatgttgggcaggtggtcacgtgtgttgtgacgtcatgttcctcagagaaaggaaaactt
aaattaagttttaacacatcagctacaccttctttaattaattctgagtctcttcttcct
ggaacgcttgtaaatgtggaggtcgtaggaaggactgatttgggacttgatgttcaaata
aaaccaagtaacactcatgcgttcattccgctggctcatttgtccgacagttacagcaat
tgtccttccctgctggagatatattctcccgttcctggaggtgaagttaaatgtctgaat
aacgtcttgttttatggaaaagataaacagaaatcattgattataacacgtaaacagtct
ttgatcaaagcagcttcaaaaagagaactagtgaagcattttgaagacttgaaggttgga
atgattctttctggctttactaggcagttaatgccttatggtgtatttngtgaggtctcg
ccaaatatctacggcttagcgccaaattcgcttttgtcaaatggttatgtcgctgatgct
tcggatcattttaaagttggccagtctgttatggcaatggtgacggagatagactacgaa
cgtcatcggttattggtcagcttgaaatcatgtgattgctatcctaaccaatcggaagac
gagaaagatcgtaaagaaagcataaatctgttggttgaatatttaaaggagcgggacgaa
atatttgatggtttgaggcattgttatgttgttcatgcaaaggttaactccattacaaat
tctggaatcaaacttcttcttgaaaatggagttgtcggctttgcagtaccacagctgagc
cgaggtgctaaccttgctgttgataaagtcttagaagcttttgttttggattatgatatt
gaatacaagagacttgatcttactgttgattcaaatgttgtcacaaaacggaaagatata
aaatctaagaacaagaaaaagttgaacattggcgaaatcgtgtcagcggtcatacaaagt
atctgtaaggagtacttactggtaatactgcctgatcatggattgcgcattggctacgtt
gcagtgagagagaatatgaacgactttcgtgatccagcaagtcgcttcaaacttggtcaa
acctgcaaagctacagttcaaaagtacgtgcgttcaaaaatcgataaacgtgaatacatg
attttaactgttgatgtcagcgaagaaactggcgacacagtccatattgggtctattgtc
aatgctataattacttctgtgaaaggagttcaattgaatgttcacattggtgcaaagaaa
tacaaaggaagggtttgtgtctcagagattacggatgacatattgcagggaaaaaatccg
ttatctttgtactctcgtggtcagaagattcagggaaaaattttaggatttcgtgactca
atcaaacataattttcttcctatcactcatcgtaatttctcaaaaacatacgctgaactt
tctatgaaggcaagtcgactacgtgaagacgagagcgatgattcaagccaagaattaaag
tcgtttgaaaaaaaacttgaagattacaaagaaggagagaggattttttgtttcgtgaaa
actatttgtgatcgtgatatttggatggtcgtctcgacatcaatcaatggaaaagttcga
cttgttgatgtttcaactgatatgaaggttttaaaggatgtttcaaaacactttagaatt
ggatgtggctatttttgcacgatactcaatgtaaataaagaacaaaaatctcttgatcta
tcgatgtcagcattatttttctttaggttgtctagggaaaaaggtgatattattcctgga
gtcattacgaaaatcctacctcataaaggtcttgcggttcagttacctcataaaaactac
ggatttgtctttctcacggatatagctgatgatttccatgaagatccattgaatgaatat
aaagtcaatcaattgattagttgttatatactcgagttgaataaaaatggaaatatgact
ctctctatacgagcatctaggactcaacctgaaacaaagacagagaaaattgataaagat
gtacaaagttttaatgatatcgaagaaggtgagattttgagagggtttgttaaagccgtc
agcgatgttggagtcttcgtcagtttgtccaaagacatcgttggtcgagtccagattaag
aatctctctcaatattttgtaaagaattggaaaccattgtttcccataggaaaacttgtc
aaagggaaaattttaagtatcgatccaaacagtaaccatatagaaatatccctgaaagga
atagatgtcggcgataaagatccggctccaaaacctgaacgaagaaaaaataaacgaaag
cttgatatggatgaggattttacagatagtgaaaatgaagacgataaaattttaaagaaa
ctaagaacagaagaaactgacgatgatgttcacaagagtgaaaaagaaaatgaagatgtt
ccatgttctgatgagagcgaatctgaggaggaagacaataatagacccacgttaaagatt
ccaggtggatttaactggcattcagcagttcacgatgataaaatggcgaagcataacgat
gaacgagcagcaaatacggaagatgatgaatcaaatgatggagaagaaaataccgagacg
gcgagaaagaaatcaaagcgagcaaaaagagcagccaagaaangcgaggaggagtttctt
tataagacagagcaagctctccttgacaaagatcttggtgcacagaccgctgaagacttt
gatcgcattctcctttctactccaaatgactcgttgctttggttacaatatatggcgtat
tatcttcatatgactgaaatagagaaagcgagagctgttggcgaacgcgcccttaagtct
atttcatttagagaggaagatgagaaattcaatgtttggattgccttattgaatctggaa
aattcgtacggtactcaggattctctcgtgaaagttttccaaagagctctggagcagaat
gagccaaaaaaagtctttgaacatttagtaacgatatataaacgatcaagtaaatttgag
gaagcagagcaactgtatcaaacgatgataaaacgatttaaatccagcaagagtgtatgg
gtagagtacgcgtcatttcttatggagcaaggagaactaaagtcatcaagagatttgcta
caacgatgtttgaaaagtttggagagacgtaaacacgttgaaactattgctaagttcgct
ttgttggaattcaaatacggcgaaactgaacgtggaaaaacagtatttgataatgtactg
acgagttatccaaaaagaactgatatttggtcaatatatgtggatgtgttaacgaagaat
ggcgatattaatgcggccagacgtcttttcgacaaagctgttactaaaaaattgtcttca
aaaaaaatgaagtttatttttaagaaatatttggagtttgagaagaaacatggcgacgaa
agcactgtgattaaagtaaagaagattgccgaggaatacgtgaaagataagacagataat
gagctttaa
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integrated database retrieval system
