Xenia sp. Carnegie-2017 (soft corals): 124443556
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Entry
124443556 CDS
T08024
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03010
Ribosome
xen04120
Ubiquitin mediated proteolysis
xen04137
Mitophagy - animal
xen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
124443556
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124443556
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124443556
04137 Mitophagy - animal
124443556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xen03011
]
124443556
04121 Ubiquitin system [BR:
xen04121
]
124443556
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xen04147
]
124443556
Ribosome [BR:
xen03011
]
Ribosomal proteins
Eukaryotes
Small subunit
124443556
Archaea
124443556
Ubiquitin system [BR:
xen04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
124443556
Exosome [BR:
xen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124443556
Exosomal proteins of colorectal cancer cells
124443556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Fer2_3
OTU1_UBXL
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
124443556
NCBI-ProteinID:
XP_046849973
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGGKKKKKTYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRREC
QSESCGAGVFMASHFDRQYCGKCHLTYVFNKPNEGK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattttcgtcaagactttgacgggaaagaccatcactttggaggtcgaaccaagt
gatactattgaaaatgtaaaaacaaaaatccaagataaagaaggtattccacctgatcaa
cagcgattgatttttgctggaaaacagttggaagatggccgaactcttagtgactacaac
attcaaaaagagtcaactcttcatcttgttcttcgactccgaggaggtgggaaaaagaaa
aaaaagacttacaccacccccaaaaaaataaagcataagaaaaagaaggttaaactagct
gtgttaaagtattacaaggtagacgaaaatggaaagatcacacgcttaagacgagagtgt
caatcagaatcatgtggtgcgggagtttttatggcaagtcattttgatcgccagtattgt
ggaaaatgtcatttgacttatgtgtttaacaaacctaatgaaggcaaataa
DBGET
integrated database retrieval system
