Xenia sp. Carnegie-2017 (soft corals): 124443636
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Entry
124443636 CDS
T08024
Name
(RefSeq) nephrocystin-4-like isoform X1
KO
K16478
nephrocystin-4
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xen03037
]
124443636
Cilium and associated proteins [BR:
xen03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
124443636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASH
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
124443636
NCBI-ProteinID:
XP_046850072
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MADESDEEESWHSFFKNNRSVPLHKTRQEKEDIESIPYRLKIKSVEGIPIPSTVRHDSVE
FQVRVTLYDAANKKFFGSTWLGAYLPCKKIDENKGKIFCNEAVYFHSPLSDVTCIGAVEL
IALDESTRTTFSCGWGILRIFDSTISMKDSSTTNDIAINRLTFLSGTVQALFYMNEPLEE
FPGLLAIPGCQLVYQLSRHSSLGNALHLFPENVLIGGDDIVPGIREGPPDANGVIDILHK
PRLEKTIAFFVDKLYVGLHPSVEDFEKQLTDDLNSDRMLKRNVQEGCPSVKIVERKLQVQ
LQPQKVGVHNGWTFVSKPHSMVLDPEYTGQVTIGNRPNSMSSLKGNITRLILRSRLNLSD
LVADKLFVIVFQLIYVMSEEFAKPVLVDNTVDVKKKRTSWRNNASLPSGSLVRSKTFNVC
VRQGIWEPFKDGNPEETNVTLVLQGGHHYHPGNVFTWFGPQRKETFKDTVRFRFTAKKKT
EQKRVNSRASSRRHSTRESMGTAESNSVFGGQSSPGVPYKDTESPHEETISFQSDFPPYR
PPSQIPTQTPISQDILVDTRVSGISEHHSPLIRPPLASGAAFTLSRAGHGRLTSAQFQKI
LDRHGNPPINIDPSVVRQYDLKYEQTDIRHCNEIIIQFFALSACFHHTVFFTYQFYRLPE
VKTERLALIDVENQAKNQSFLPCLLQKFDSDGTIDKNPGLQFKYFFDPCDMLPGEMYQLW
NYLKNHRLYIDVWNGESLLLIGSTSLDLKHLLRQGQEAVQAMHELDILSTDYCEHLPATG
EATRNVGLRSAGSAMKFQDKLYLRIANIGHPSENKSEKPCIVPRKQRYVVKADINEGQYA
FPTRSKAKLMKECDRELARVLLSRDANKKGTSDGRPIKESDAVRQRKLERMQAIRKTQKG
LPFTTTHLIKEEKVQRARDLKTVQMYRQKWKKEGIMELLSRNITTTHTIYPSFGQAVFFE
FVLKNPYASESTVIVQCDDNELMVVSNTQEWKEYKKLTQTSTNIEEDMFNLATESGYPEI
FMRSQETVNIPFKYQSFKSTSEQASSILHAKDENGRVVKKKELSYNIKVVFETPQQQRLA
ILSLKVELQPLAVDQTFRFNSPEQTYFKKTIRLPHWHALADEPLRDGEVPREMHVRCSDI
NVICNTTSNGRDQPQDIFLKVPCGASPSVRRFFLFVYTDRFHIKPKQTWQLYVHSLQRLD
ISSTQGQSSRLSCVLRGTHSSRLVQCFSSLPAELQVEPSDPFMLMANGVQEVSLNFTPCT
PGLKQIIVNVVDTEFSQLLRSWLVCATSRPPVISKTFDINVELGGGKGSRKRIQFINPYQ
VGKTFYLKCNLDNVLHLENTTLNLGPGEAQSISLRFQPRQSAAQLKILVFVYDGDGKNEE
TFLLNVIYR
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaaagtgacgaagaagaatcttggcacagtttctttaaaaataatcgttct
gtgccgttacacaagactcgacaagaaaaggaagatattgaaagtattccctatcgtttg
aaaattaaatctgttgaaggaataccaattccaagcactgttcgtcatgattcagtggag
tttcaagttcgtgtcacactttatgacgctgctaacaagaaattctttgggagcacatgg
cttggcgcttatcttccatgtaagaaaattgatgagaataagggcaaaatattttgcaat
gaggctgtctattttcattctcctctgagtgatgttacttgcattggtgcagttgagttg
attgcattggacgaatcaactagaacaaccttttcttgcggttggggaattctgagaatt
tttgattcaaccatttcaatgaaagattcctcaaccacaaatgacatcgctattaacaga
ttgacgtttctgtctggaactgttcaagcattgttttacatgaacgaaccattggaagag
tttccagggttactggcaattcctggatgtcagttggtctatcaactatcccgccattca
agtttaggtaatgcacttcatctgtttcctgaaaacgtcttgatcggtggtgacgatata
gttccgggaattcgagaaggaccgccagatgcaaacggtgtcattgatatcttacataaa
cctcgtcttgagaagacaatagcgttcttcgttgacaagttgtacgttggtcttcaccct
tctgtggaagattttgaaaagcaactaacagatgatctaaattctgacagaatgttaaag
cgtaatgttcaagaaggttgcccgagtgtgaagatcgttgaaagaaaattgcaggttcaa
ttacaacctcaaaaagttggtgtacataacggatggacgtttgtcagcaagccacacagt
atggtgttggacccagagtacacaggtcaagttacgataggaaacagaccaaactccatg
tcttcattgaaagggaacataaccagactgatattgcgtagtcgacttaatctgtcggat
ttagtcgctgacaagttgtttgttattgttttccaactcatctacgtcatgtctgaggaa
tttgcaaaaccagttcttgttgataacaccgttgacgttaagaaaaaacggacttcttgg
agaaacaacgcgagtttgccttcgggaagtttagtacgttcaaaaacgtttaatgtttgc
gttcggcaaggaatttgggaaccattcaaggatggtaacccagaggaaactaatgtgaca
ttggtcttacaaggagggcatcactatcaccctggaaatgtgttcacgtggttcggaccg
caaagaaaagagacatttaaagatactgttcgctttcgattcacagccaagaaaaaaact
gaacaaaagagggtaaattcacgcgctagctcacgaaggcattccacgcgggaatccatg
ggaaccgcggagagcaatagtgtttttggtggacaaagttccccaggtgtaccatataag
gacacagaatctccacacgaagaaactatatcgtttcagtcagattttccaccttatcga
ccaccttcgcaaatcccaactcaaacgccaatttcacaagatatactagtggatactcgt
gtatctggaatttccgaacatcattctcctctgattcgtcctcccttagcatcaggagct
gctttcacgttatcacgtgccggtcatggacgtttgactagtgcccagttccaaaagatt
cttgatcgtcatggtaatccaccaatcaacatcgacccaagtgttgttcgtcagtatgat
ttgaaatacgaacaaacagacattcgacattgtaatgaaatcattattcagttttttgct
ttatctgcctgtttccatcacactgtcttctttacatatcagttttatcgattgccagaa
gtgaaaactgaaaggttggcattaattgacgtagaaaatcaagcaaaaaaccagtcattt
ctgccatgtttgttacaaaaatttgatagtgacggaacaattgataaaaatccaggatta
cagttcaagtattttttcgatccgtgtgacatgttgccgggggagatgtatcaattatgg
aactaccttaaaaatcatcgtctttacatagacgtctggaatggtgaatcgctattgctg
attggatcaacttcactggatttaaaacatttgcttcgtcaaggccaagaagcagtgcaa
gctatgcacgagctggatattttatccacggactactgcgaacacttgcccgccactgga
gaagcaactcgtaacgttggtttgaggtcagctggatctgcaatgaaatttcaagacaaa
ctatatttacgcattgcgaatattggccatccaagtgaaaacaaatcggaaaaaccttgt
atagtaccgagaaaacagcgttatgttgtcaaagcagacatcaatgaagggcagtacgcg
tttcccacgcgatcgaaagcaaagcttatgaaagaatgtgatcgagagttggcgagagtt
ttgttgtctagagatgcaaacaagaaaggtacatcagacggaagaccaatcaaggaatca
gatgccgtaagacaaagaaagctggagagaatgcaggcaataagaaaaacacaaaaagga
ctgcctttcactacaacccacctcatcaaggaagaaaaagttcaacgagcaagggatttg
aaaacagttcaaatgtatcgacaaaaatggaaaaaggaaggcatcatggagctactttca
aggaatataacaacaacacatactatatatccaagttttggtcaagctgtgttttttgaa
tttgttctgaagaacccgtacgcatcggagtcaacagttatcgtacagtgtgatgacaat
gaactaatggtagtttcgaatacccaagaatggaaagaatacaagaagctgactcaaact
tcaaccaacatcgaagaagacatgtttaatctggccactgaaagtggctaccccgagatt
tttatgcgttcgcaagaaaccgtaaacataccattcaaatatcaaagcttcaagtcaacc
agtgaacaagcgtcatctattttacacgccaaagatgaaaatggacgtgttgtcaaaaaa
aaggaactttcttacaacattaaggtcgtatttgaaacaccacagcaacaacgtctagcg
attctttcacttaaagtcgaattgcagccacttgccgttgatcagacctttagatttaac
agtccagaacaaacatactttaagaaaaccattcgactaccacattggcatgcattagca
gatgagccccttcgtgatggtgaagtaccaagagagatgcatgttcgctgcagtgacatc
aatgtgatttgtaatacaacttctaatggcagggatcaaccacaagatatctttttgaaa
gttccatgtggagcttcaccatctgtgagaagattttttttatttgtttacacagaccga
tttcacatcaaacccaagcaaacatggcaactctacgttcattctttgcaaaggctagat
ataagttctacacaaggacagagcagtcgcttatcttgtgtacttcgcggtacacattca
tcacgacttgttcaatgtttttcttcactaccagcggaactccaggttgaaccatctgat
cccttcatgttaatggcaaatggagttcaagaagttagcttaaattttacaccttgcacg
cccggattgaagcagataatcgtgaacgttgttgacacagaatttagccaattgcttcga
tcatggttagtctgtgctacatctcgtccaccagttatttcaaagaccttcgatataaac
gttgaactgggcggaggaaagggatctcgtaagaggattcagttcatcaacccgtatcaa
gttggtaaaacgttttatttaaaatgcaacctcgataatgtacttcatctagaaaacact
acactaaatcttggtccaggtgaggctcagagtattagtttacggtttcaaccccgacaa
tcagctgctcaacttaaaattctcgtgtttgtttacgatggtgacggaaaaaacgaggaa
acgttcctactcaatgtgatttaccgttga
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