Xenia sp. Carnegie-2017 (soft corals): 124443645
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Entry
124443645 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4-like
KO
K16478
nephrocystin-4
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xen03037
]
124443645
Cilium and associated proteins [BR:
xen03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
124443645
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ASH
DNA_mis_repair
Motif
Other DBs
NCBI-GeneID:
124443645
NCBI-ProteinID:
XP_046850088
LinkDB
All DBs
Position
Unknown
AA seq
1379 aa
AA seq
DB search
MADESDEEESWHSFFKNNRSVPLHKTRQEKEDIESIPYRLKIKSVEGIPIPSTVRHDSVE
FQVRVTLYDAANKKFFGSTWLGAYLPCKKIDENKGKIFCNEAVYFHSPLSDVTCIGAVEL
IALDESTRTTFSCGWGILRIFDSTISMKDSSTTNDIAINRLTFLSGTVQALFYMNEPLEE
FPGLLAIPGCQLVYQLSRHSSLGNALHLFPENVLIGGDDIVPGIREGPPDANGVIDILHK
PRLEKTMAFLVDKLYVGLHPSVEDFEKQLTDDLNSDRMLKRNVQEGCPSVKIVERKLQVG
VHNGWTFVSKPHSIVLDPEYTGQVTIGNRPNSMSSLKGNITRLILRSRLNLSDLVADKLF
VIVFQLIYVMSEEFAKPVLVDNTVDVKKKRTSWRNNASLPSGSLVRSKTFNVCVRQGIWE
PFKDGNPEETNVTLVLQGGHHYHPGNVFTWFGPQRKEAFKDTVRFRFTAKKKTEQKRVNS
RASSRRHSTRESMGTAESNSVFGGQSSPGVPYKDTESPHEETISFQSDFPPYRPPSQIPT
QTPISQDILVDTRVSGISEHHSPLIRPPLASGAAFTLSRAGHGRLTSAQFQRFLIVMVIP
INIDPSVVRQYDLKYEQTDIRHCNEIIIQFLALSACFHHIVFFTYQFYRLPEVKTERLAL
IDVENQAKNQSFLPCLLQKFDSDGTIDKNPGLQFKYFFDPCDMLPGEMYQLWNYLKNHRL
YIDVWNGESLLLIGSTSLDLKHLLRQGQEAVQAMHELDILSTNYCEHLPATGEATRNVGL
KSAGSATKFQGKLYLRIANIGHPSENKSEKPCIVPRKQRHVVKADINEGQYAFPTRSKAK
LMKECDRELARVLLSRDANKNGTSDKRPTKESDAVRQRKLERMQAIRKIQKGLPFTTTHL
IKEEKVQRARDLKTVQMYRQKWKKEGIMELLSRNITTTHTIYPSFGQAVFFEFVLKNPYA
SESTVIIQCDDNELMVVSDTQEWKEYKKLTQTSTNIEEDMFNLATESGYPEIFMRSQETV
NIPFKYQSFKSTSEQASSILHAKDENGRVVKKKELSYNIKVVFETPQQQRLAILSLKVEL
QPLAVDQTFRFNSPEQTYFKKTIRLPHWHALADEPLRDGEVPRGMHVRCSDINVICNTTS
NDQPQDIFLKVPCGASPSVRRFFLFVYTDRFHIKPKQTWQLYVHSLQRLDISSTQGQSSR
LSCVLRGTHSSRLVQCFXSLPAELQVEPSDPFMLMANGVQEVSLNFTPCTPGLKQIIVNV
VDTEFSQLHRSWLVCATSRPPVISKTFDINVELGGGKGSRKRIQFINPYQVGKTFYLKCN
LDNVLHLGNTTLNLGPGEAQSISLRFQPRQSAAQLKILVFVYDGDGKNEETFLLNVVYR
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgaaagtgacgaagaagaatcttggcacagtttctttaaaaataatcgttct
gtgccgttacacaagactcgacaagaaaaggaagatattgaaagtattccctatcgtttg
aaaattaaatctgttgaaggaataccaattccaagcactgttcgtcatgattcagtggag
tttcaagttcgtgtcacactttatgacgctgctaacaagaaattctttgggagtacatgg
cttggcgcttatcttccatgtaagaaaattgatgagaataagggcaaaatattttgcaat
gaggctgtctattttcattctcctctgagtgatgttacttgcattggtgcagttgagttg
attgcattggacgaatcaactagaacaaccttttcttgcggttggggaattctgagaatt
tttgattcaaccatttcaatgaaagattcctcaaccacaaatgacatcgctattaacaga
ttgacgtttctgtcgggaactgttcaagcattgttttacatgaacgaaccattggaagag
tttccagggttgctggcaattcctggatgtcagttggtctatcaactatcccgccattca
agtttaggtaatgcacttcatctgtttcctgaaaacgtcttgatcggtggtgacgatata
gttccgggaattcgagaaggaccgccagatgcaaacggtgtgattgatatcttacataaa
cctcgtcttgagaagacaatggcgttcctcgttgacaagttgtacgttggtcttcaccct
tctgtggaagattttgaaaagcaactaacagatgatctaaattctgacagaatgttaaag
cgtaatgttcaagaaggttgcccgagtgtgaagatcgttgaaagaaaattgcaggttggt
gtacataacggatggacgtttgtcagcaagccacacagtatagtgttggacccagagtac
acaggtcaagtaacgataggaaatagaccaaactccatgtcttcattgaaaggtaacata
accagactgatattgcgtagtcgacttaatctgtcggatttagtagctgacaagttgttt
gttattgttttccaactcatctacgtcatgtctgaggaatttgcaaaaccagttcttgtt
gataacaccgttgacgttaagaaaaaacggacatcttggagaaacaacgcgagtttgcct
tcgggaagtttagtacgttcaaaaacgtttaacgtttgcgttcggcaaggaatttgggaa
ccattcaaggatggtaacccagaggaaactaatgtgacattggtcttacaaggagggcat
cactatcaccctggaaatgtgttcacgtggttcggaccgcaaagaaaagaggcatttaaa
gatactgttcgctttcgattcacagccaagaaaaaaactgaacaaaagagggtaaattca
cgcgctagctcacgaaggcattccacgcgggaatctatgggaaccgcggagagcaatagt
gtttttggtggacaaagttccccaggtgtaccatataaggacacagaatctccacacgaa
gaaactatatcgtttcagtcagattttccaccttatcgaccaccttcgcaaatcccaact
caaacgccaatttcacaagatatactagtggatactcgtgtatctggaatttccgaacat
cattctcctctgattcgtcctcccttagcatcaggagctgctttcacgttatcacgtgcc
ggtcatggacgtttgactagtgcccagttccaaagattcttgatcgtcatggtaatacca
atcaacatcgacccaagtgttgttcgtcagtatgatttgaaatacgaacaaacagacatt
cgacattgtaatgaaatcattattcagtttcttgctttatctgcctgtttccatcacatt
gtcttctttacatatcagttttatcgattgccagaagtgaaaactgaaaggttggcatta
attgacgtagaaaaccaagcaaaaaaccagtcatttctgccatgtttgttacaaaaattt
gatagtgacggaacaattgataaaaatccaggattacagttcaagtattttttcgatccg
tgtgacatgttgccgggggagatgtatcaattatggaactaccttaaaaatcatcgtctt
tacatagacgtctggaatggtgaatcgctattgctaattggatcaacttcactggattta
aaacatttgcttcgtcaaggccaagaagcagtgcaagctatgcacgagctggatatttta
tccacgaactactgtgaacacttgcccgccactggagaagcaactcgtaacgttggtttg
aagtcagctggatctgcaacgaaatttcaaggcaaactatatttacgcattgcgaatatt
ggccatccaagtgaaaacaaatcggaaaaaccttgtatagtaccgagaaaacagcgtcat
gttgtcaaagcagacatcaatgaagggcagtacgcgtttcccacgcgatcgaaagcaaag
cttatgaaagaatgtgatcgagagttggcgagagttttgttgtctagagatgcaaacaag
aacggtacatcagacaaaagaccaaccaaggaatcagatgccgtaagacaaagaaagctg
gagagaatgcaggcaataagaaaaatacaaaaaggactcccttttactacaacacacctc
atcaaggaagaaaaagttcaacgagcaagggatttgaaaacagttcaaatgtatcgacaa
aaatggaaaaaggaaggcatcatggagctactttcaaggaatataacaacaacacatact
atatatccaagttttggtcaagctgtgttttttgaatttgttctgaagaacccgtacgca
tcggagtcaacagttatcatacagtgtgatgacaatgaactaatggtagtttcggatacc
caagaatggaaagaatacaagaagctgactcaaacttcaaccaacatcgaagaagacatg
tttaatctggccactgaaagtggctaccccgagatttttatgcgttcgcaagaaaccgta
aacataccattcaaatatcaaagcttcaagtcaaccagtgaacaagcgtcatctatttta
cacgccaaagatgaaaatggacgtgttgtcaaaaaaaaggaactttcttacaacattaag
gtcgtatttgaaacaccacagcaacaacgtctagcgattctttcacttaaagtcgaattg
cagccacttgccgttgatcagacctttagatttaacagtccagaacaaacgtactttaag
aaaaccattcgactaccacattggcatgcattagcagatgagccccttcgtgatggtgaa
gtaccaagagggatgcatgttcgctgcagtgacatcaatgtgatttgtaatacaacttct
aatgatcaaccacaagatatctttttgaaagttccatgtggagcttcaccatctgtgaga
agattttttttatttgtttacacagaccgatttcacatcaaacccaagcaaacatggcaa
ctctacgttcattctttgcaaaggctagatataagttctacacaaggacagagcagtcgc
ttatcttgtgtacttcgcggtacacattcatcacgacttgttcaatgttttncttcacta
ccagcggaactccaggttgaaccatctgaccccttcatgttaatggcaaatggagttcaa
gaagttagcttaaattttacaccttgcacgcccggattgaagcagataattgtgaacgtt
gttgacacagaatttagccaattgcatcgatcatggttagtctgtgctacatctcgtcca
ccagttatttcaaagaccttcgatataaacgttgaactgggcggaggaaagggatctcgt
aagaggattcagttcatcaacccgtatcaagttggtaaaacgttttatttaaaatgcaac
ctcgataatgtacttcatctaggaaacactacactaaatcttggtccaggtgaggctcag
agtattagtttacggtttcaaccccgacaatcagctgctcaacttaaaattctcgtgttt
gtttacgatggtgacggaaaaaacgaggaaacgttcctactcaatgtggtttaccgttga
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