Xenia sp. Carnegie-2017 (soft corals): 124443803
Help
Entry
124443803 CDS
T08024
Name
(RefSeq) DNA mismatch repair protein Mlh1-like
KO
K08734
DNA mismatch repair protein MLH1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03430
Mismatch repair
xen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124443803
03460 Fanconi anemia pathway
124443803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xen03400
]
124443803
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
124443803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
124443803
NCBI-ProteinID:
XP_046850291
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MAGNLMVNEKAPDKDTTPSIRKLDESVVNRIAAGEIVNRPVNAVKEMIENCLDAKANAIQ
VTVKSGGLKYLQIQDNGCGIRQEDMPIVCERFTTSKLSKFEDLNKISTYGFRGEALASIS
HVAHLTIITRTKNSNCAFKAQYSDGKLKGSPKPCAGNQGTQIVVEDLFYNMLTRKKALKN
PNEEYAKIVDVVGKYAIHNSGIAFTVKKLGQNFGDVKTLNSAGIVDNISVIYGAGISKEI
ISVSHDNQHYGYKMNGYITNANYSMKKFIFLLFINNRLVDSPSIRKAIDNVYSAYLPKGT
HPFVYLSLEINPANVDVNVHPTKHEVHFLHEYAIIEAIQKKFEEMLLGCNSSRTYYTQCL
LPNVVQDSITGDKTSSKQSQQRVYDKQLVRTDSREQTLHAFVKPQSAASSDQSIPSEKKG
DDASCSENNEDVIMLQDELEEMSDSNGSSKTVSTSKSPCRRSLRRDIRLTSVLELRNAID
KAEHKDLKSVFENHKFVGCVEKSLALMQHGTKLYLVNVTSISREFFYQILLFAFGNFGYL
HINPPASIYDLALLALNAPNSSWTPEDGPREELADLIVSNLKEKSTMLDDYFSLVIDENG
HLKSLPLLLDNYVPNLNGLPMFLLRLATEVEWNKEKECFESFSKECALFYAFKTDPYVGE
EITENGHDENWKWTVEHVLFPAFRSGFHPPQRMADDGSILQVANLPDLYKVFERC
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaatttgatggtgaacgagaaagctccggacaaagatacgactccttctatc
cgaaagcttgacgaaagcgtcgtaaatcgtattgcagcaggcgaaattgtaaatcggcca
gtgaatgccgtcaaagaaatgatagaaaactgccttgacgccaaagcaaacgctatacaa
gttactgtaaaatctggaggattaaaatacctacaaatacaagacaacggctgtggtatt
cgtcaagaagacatgcctatagtatgcgagcgattcacaaccagtaaactaagcaagttt
gaagacttgaataagatttccacttacggttttcgtggtgaagcattagctagcataagt
cacgttgcccatcttacaatcataacaagaaccaaaaactcgaactgtgctttcaaagct
cagtacagcgatgggaaactcaagggttcgccaaaaccgtgtgctggaaatcaaggtact
caaatagtagtcgaagacttgttttacaatatgttgactagaaagaaagccttaaaaaac
ccgaacgaggaatatgccaaaatagtcgacgtcgttggaaaatatgccatacacaactca
gggattgcgtttactgttaaaaaacttggccagaactttggtgatgtgaaaacacttaac
tctgccgggattgttgacaacatctctgttatctatggtgctggtatctccaaagaaata
atttcagtttcgcatgacaaccaacattatggttataaaatgaatggctatattacaaat
gccaattattccatgaagaaatttatattcttgctatttattaacaatcgtttggttgat
tctccatcaattcgtaaagcaatagataatgtttactccgcctacttacctaaaggaaca
catccatttgtctacttaagtcttgaaataaatccagccaatgttgatgttaatgtgcat
ccgaccaaacatgaggttcactttcttcatgaatatgcaatcatcgaggctattcaaaaa
aaatttgaagagatgcttcttggatgtaattcctctcggacctattacacacagtgtttg
ttaccaaatgttgttcaggactcaattacaggtgacaaaaccagcagcaaacaaagtcag
caaagagtgtatgacaaacagctggttcgaacagatagcagagaacagactctacatgct
tttgtcaagccacagtcagctgcttcatcagaccaaagcattcctagcgaaaagaaaggg
gatgatgcatcttgtagtgaaaacaatgaagatgttatcatgttacaggatgaattggag
gaaatgtctgattccaacggtagtagcaagacagtgagcacttctaaatctccgtgtcgt
cgttccttgcgcagagatatacgtttaactagcgtactagaactgcgcaacgcgatcgat
aaagctgaacacaaggatcttaaaagcgtattcgagaaccacaagtttgttggttgtgtt
gaaaagtcgcttgctttgatgcagcacggaacgaagttgtatcttgttaacgtcacatct
atcagtcgcgaatttttctatcaaattttgctgtttgcattcggcaattttggttatctt
cacatcaatccaccggcatccatttatgatcttgccttgcttgctttgaatgcccctaat
tcgagctggactccagaagatggccctcgcgaagaacttgccgatttgattgtatcgaat
ttaaaggagaaatcgacaatgttggacgattatttttctttggttatcgatgaaaacggt
catttgaagtcactgccgttgttactagataactatgttcctaatcttaatggactaccg
atgtttttactgagactggctactgaggtggagtggaacaaggagaaggaatgtttcgaa
tcgttttctaaggaatgcgcattgttctacgcattcaaaactgatccctatgtcggtgaa
gagatcacggagaatggacacgatgagaactggaaatggacggttgaacatgttcttttt
cccgccttccgaagtggattccatcctccacaaagaatggccgatgatggcagcatcctt
caagttgccaacctacctgatttgtataaggttttcgaacgatgttga
DBGET
integrated database retrieval system
