Xenia sp. Carnegie-2017 (soft corals): 124443967
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Entry
124443967 CDS
T08024
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B-like
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124443967
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
124443967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_N
Rrn7_cyclin_C
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
124443967
NCBI-ProteinID:
XP_046850475
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MPSCVVCYEENFHIVDGLYYCTNCGTQSEDVREEIHDMDQEMIDGRLEIKKKSVKVSDRI
QKDLGKPWFSLEGYQVLLKAQINFLMNLGVDSNLKDIVGQMWFSFVEKSTNAFGTHNKGD
SSHHIRARDNIKDFVPINSIPRKLRFGKQCDEEALELSSEIAREELYEARIFEDKENDVD
NESHIGSVDQSRYYPSTHDYRVMTVQHTMVFCFLGLQWLQEPICLSDLIRWAIENEFPYF
NATAYFPDYMKLSHWDSIMFTRSTMPNKSHLENLAEKLRVYINLPKIPKHPFNIYVARYA
LDLQLTPLIHRHVCKVVQMIDKYLETIDEIIHYDNSAMACLIISLRLIYGLDDDTECELS
KEATEIENGELYFPLWNDVIGKICFSHRQLVERGFPRNKDDLRMLKDARNYGEFCREKLF
GSWKAGTTVHPCKRHLKGGRGLNLQKQEDYGKLFDKLLHEKENTEKSPTSFPLLSCITTT
TPTPKKGLRLIDMQRFYQRQKENKGTVGPLRNKYSLYKISLRDTYCLNYWQDLQLPKSLK
QLVEVCSKLIFLEPALLAFQMRKFENEFFNIWA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatgtgtcgtatgttacgaagaaaactttcacatcgtagatggattatactat
tgtacaaattgtggaacacagtcagaagatgttcgagaggagatacatgacatggaccag
gaaatgatagatggcagactggaaatcaaaaagaagtcagtcaaagtttctgacagaata
caaaaggatttgggaaagccatggttttcgcttgaaggttatcaagtgctattaaaagca
caaataaattttttgatgaatcttggcgtagattccaatttgaaggatatagttggacaa
atgtggttttcttttgtggaaaagtcaaccaatgcttttggcacacataataaaggagac
tcttctcaccacattagagcacgagataacataaaggattttgttccaataaactcaatt
ccacgtaagctacgctttggaaaacagtgtgatgaggaagcattagagctaagttcagag
atagctcgtgaagaattgtatgaagcaagaatttttgaggacaaagaaaatgatgttgat
aatgagagtcacattggatcagttgatcaaagtcgctattatccctctactcatgactat
agagtgatgacagtacagcatacaatggtattttgtttccttggattgcaatggttacag
gaacctatatgtttgtcagatttaataagatgggcaattgagaatgagtttccatatttc
aatgcaactgcctatttcccggactacatgaagttgtctcattgggattccatcatgttt
acaagatcaacaatgccaaacaagtcacatcttgaaaatcttgcagaaaaattaagggtg
tatatcaatttaccaaaaatacctaagcatccattcaacatctatgttgcacgctatgca
ttagatctgcaacttacaccattgattcatcgccatgtgtgtaaagttgtacaaatgatt
gataagtatttggaaaccatagatgaaatcattcattatgataacagtgcaatggcatgc
ctcattatatccctgagattaatctatggcttggatgatgacactgaatgtgaactgtca
aaagaagcaactgaaattgagaacggtgaattgtactttcctttatggaatgatgtcatt
ggaaagatctgcttcagtcatcgtcagttagttgaacgaggatttcccaggaacaaggac
gatctacgcatgcttaaagacgctcgtaactatggcgaattttgccgtgaaaaattgttt
ggatcatggaaagcaggtacaacagtgcatccatgcaaacgacatcttaaaggaggaagg
ggtttaaacctgcaaaaacaggaggattatggaaaactgttcgacaaactcttacatgaa
aaagaaaatacagagaagagtcctactagctttccacttttgtcctgcatcaccacaact
acacccacacccaagaaaggattgcgtcttatcgacatgcaacgattttaccaaagacaa
aaggaaaataaaggaacagtgggccctttgaggaataaatattcgttgtacaaaatttct
ttgagagatacatattgtttaaactattggcaggacttgcaactacccaaatcactaaaa
caacttgtggaagtgtgttcaaaactgatatttcttgagcccgcgttgctcgcgtttcaa
atgaggaaatttgaaaatgagttttttaatatttgggcataa
DBGET
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