Xenia sp. Carnegie-2017 (soft corals): 124444104
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Entry
124444104 CDS
T08024
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124444104
Enzymes [BR:
xen01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
124444104
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124444104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
FtsJ
Motif
Other DBs
NCBI-GeneID:
124444104
NCBI-ProteinID:
XP_046850640
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MGRKRELSELGKRGPGKKAKIQPPPEIFSQDKATKTNKHEKKKKQPGRKTKQNTKEKMKL
EKNMNLFEDGSEDDGIDLGDDDFLNSEEQEESTPADEFGLELDSDGLSDDQDNYEDHEDD
QLMAIEKKSRKLDKKLKENRILGDEELQTNIAEKHVFILPSGQEIEKELLEPPDITLIHQ
RICENISALNDFKKCREPGRSRKEYVDLLRNDLMNYYSYSEFMINKLIDIFPLSELLEFL
EANEVQRPVTIRTNTLKCRRRDLAQALISRGVNLDPIGKWSKVGLVVYDSSVPIGATPEY
LGGHYMLQGASSLMPVMALAPQDNERILDMCAAPGGKTSYIGALMKNSGNIVANDQNKDR
LKALVGNLHRLGVNNTLVCNYDGRLFPKIMGGFDRVLIDAPCSGTGVISKDKSVKTNKDE
KDIQRCSHLQKELILAAIDSVDAQSSSGGYICYSTCSILVEENECVVEYALNKRHVKLVE
TGLDIGNEGFTKFRGRHFHGTMKLTRRFYPHVHNMDGFFVAKLKKFSNSIPQTLAEVTND
HHSMDDRAKSSDETKNDKSSKKNKKSKKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgggtagaaaaagggagttaagtgaactgggaaagcgaggtcctggaaaaaaggcaaag
attcagcctcctccagaaatattttctcaagataaagcaacaaaaacaaacaaacatgag
aagaagaaaaagcagccaggaagaaaaaccaaacaaaatactaaagagaagatgaagttg
gagaaaaacatgaacttatttgaggacggcagtgaggatgatgggattgatctgggtgat
gatgattttctcaattctgaagaacaagaagaaagtacaccagcagatgagtttggtctt
gaattagacagcgatggtttgtcggatgaccaagataattatgaagatcatgaagatgac
cagttaatggccattgagaaaaagtctcgaaagttggacaagaaacttaaagaaaacaga
atcttgggtgatgaggaacttcagacaaatattgccgaaaaacatgtgtttatacttcct
agcggacaagaaattgaaaaagaattgctcgaacccccggatataacattgatacatcaa
agaatttgtgaaaacattagcgcgctgaacgatttcaagaagtgtagagaacctggcaga
agtcgtaaagaatacgttgacttgttaagaaatgatctgatgaactactacagttacagt
gaattcatgatcaataaactcatcgatatttttccgctttcggagcttttggaattcctg
gaagcaaatgaagtccaacggccagtcactattcgtactaacacgttgaaatgtcgtcga
cgtgatttggcacaggctttgattagtcgtggagtcaatcttgatcctattggaaaatgg
tccaaagttggattggttgtgtacgactcatctgttccaattggtgctacacctgaatat
cttgggggccattacatgttacaaggtgcttcgtctttgatgcccgtaatggcgcttgcc
cctcaagataacgagcgaattcttgatatgtgtgctgcacctggaggcaaaacatcttac
ataggtgctttgatgaagaattctggaaatatagttgcaaatgatcaaaataaagacaga
ttgaaagcattagttggaaatctacacagactaggagtgaacaacacattagtgtgtaac
tatgatggaagattatttcctaagattatgggtggctttgatcgtgttctcattgatgct
ccctgtagcggaactggagtcatatccaaggataaatctgttaaaacaaacaaggatgaa
aaagacattcaacgttgctcacacttacaaaaggaactgattcttgctgccatagattcc
gttgacgcacaatcgtcatcgggaggctatatatgttattctacgtgttctatattggtc
gaagaaaatgaatgtgttgttgagtatgccttaaataaacgacacgttaaactggttgaa
actggtttggacattggtaacgaaggttttacgaagtttcgcggtcgtcatttccacgga
acgatgaaattaactcgaagattctacccccatgttcataatatggatggattttttgtt
gcgaaactaaagaaattttccaacagcattccgcagacacttgctgaggttacaaatgat
caccatagtatggacgacagagcgaaaagttctgatgaaacaaagaatgataaatcaagc
aaaaagaacaagaagagcaagaaaaaataa
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