Xenia sp. Carnegie-2017 (soft corals): 124444335
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Entry
124444335 CDS
T08024
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124444335
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
90S particles
Other 90S particles
124444335
Pre-60S particles
Other pre-60S particles
124444335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
ParcG
Motif
Other DBs
NCBI-GeneID:
124444335
NCBI-ProteinID:
XP_046850876
LinkDB
All DBs
Position
Unknown
AA seq
1252 aa
AA seq
DB search
MVKIRKAKGKIWAKRQSCSSNPSISSHRDAAKRGFREEGQARSNLTVEAIARHNEHDDDE
DVILDEVETTGKSDGNFSISGLTDCSNSTFSIVLKRFWQSPGANHREICAVLAAVTEVIR
KNNGKETETEYFAALMTALEKTDDESSLSAISFLLSLVIKRVPRSILQVKFSAVCQAVLT
ILSAKVDSASTALLKNLLACLSTALKAQEATVWSNSSTLKSFQGLLSFTVHSKPKVRKCA
QESVASIINYNDENAEFHPACLTASKFCIQELEQYKGSSQAISALHILGLLKSTISNFSS
QTVKMICESLLKLMTMGNIMLSMNCMQVLYRLFQDKPSTSTLNVKLNGQLINALFDYQPN
AVDEQQAVAWLTLMEKAYSNFQRLDPSSCADSCVKLFASCMTFLLSHHSVVKNTAGTTMK
FLLQECISPMSQQLCLGLESKDTSVSPVLAILKCLESGIKLRYQGSWRIIIDVISKFFEL
FGKLCPERLTKCLVSLCNLHNSPGIQCRRELEKTVGMAFRVMGPKFVLQVVPLDLDKDAN
ICEFPRSWLLPVMRDHIQETEMIFFFKTFLPLADSLREKAEKLKANKSDLEAKVFTTLSL
QIWDTLPSFCTKPTDLLQSFKSVAKTLGSLLNERDDLRGRICQAIRLLVSRNLDNEEYVK
ELSRYAKNYLPILFNLYTACEEKNDSVSLPILGTLKTYLQITDKKLVEQFFKKAFDRVKS
TDTPSAKKHMLMDLIIAMVQYLNDEDLEVLYGTIEQWLKAKDSKLQKKSYRILEEICCAG
SAEEYFLSHVEDIQKVMEESLNVASSVSKAPRLRCLIQIVKKVQPGQEMFLNTIIPEVIL
STREVNSKARSASLKLLVQIAETYIRCSQQSTEACIDTFLGTLVAGFGGSPNMVSGTIIA
MSKILYEYKGRYTAKVLNQLIETTTNLLQSNKREIVKSALGFFMVALRVTSSEEFSPYLK
NLVSGLVNWSDESRNKFRFKAQVLFERLIRKYGYKVIYDLVPEEHRKFVRNIHKRVERGK
RKKVEGHSHSELYKLKEKSGHIDSYEDLMFGSDDDEDDAENDKSSLHKNKNLKKKSIPKA
FIQESEPDEPLDLLSSNISQHITATAPLTRRSKDSGFELTEDGRLIIPDENETNTKKSEI
PSGSSILREDMELEPSSVLADKRKRVVSDDGTEEAVVGKKSKFNEDFGEEYRAKKAGGDM
KKKGKPDPYAYLPLNTNVLNKRKRAKLTGQFKGIVKGVKRGSQKSKKFQKRK
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatacgtaaagcgaaaggtaaaatatgggctaaaaggcagagctgctcttca
aatccatcgatcagctcacaccgagatgctgctaaacgtggttttcgagaagagggtcaa
gctagatcgaatctcaccgtagaagccattgcaagacacaatgaacacgatgatgacgag
gatgttatcttggatgaggttgagacgacgggaaagtccgatggcaatttcagtatcagt
ggtttaactgactgctccaattcgacattttctattgttttgaaaaggttttggcagtca
cccggcgctaaccatagagaaatttgtgcagttttggctgctgtcactgaggtgataagg
aaaaataatggcaaagaaacagagacagaatactttgctgccttgatgactgccctagag
aagactgatgatgaaagttctttgtcagctatatcatttcttttatcattggtgataaaa
agggttccacgatcaattttgcaagtaaaattttcagcagtttgtcaagcagttctgacc
attttgtcagccaaagtagattctgcatccacagcacttttgaaaaatcttctcgcatgt
ttgtcaacagctctaaaagcacaagaagccacagtttggtctaactcgtcaactttgaag
tcttttcaaggattactgagttttacagtccactcaaagcccaaggtgagaaagtgtgca
caagaatctgttgcttctataatcaattacaatgatgagaatgctgagtttcaccctgct
tgtttgactgcatcaaaattctgtatccaagagctggagcaatacaaaggctcgtcacaa
gcaatttctgctcttcacatccttggtctattgaaaagcacaatttcaaacttttccagc
cagacagtaaaaatgatttgtgagtctttgttgaagttaatgaccatggggaatattatg
ctgtcaatgaactgcatgcaagtactttacagattgtttcaagataagccttctacttca
actttgaatgtcaaattaaatggacagttgattaatgctttgtttgactaccagccaaat
gcagttgatgaacagcaagctgttgcttggctgacactcatggaaaaagcttacagtaac
tttcaaaggcttgatcccagctcgtgtgctgactcgtgtgtgaaacttttcgcttcttgc
atgacatttttactgtcacatcattctgtggtcaaaaacactgctggcactacaatgaag
tttcttctacaagaatgtatttcaccgatgtcacaacaactctgtttgggattagagagt
aaagatacatcagtctctcctgttttggcaatactgaagtgtctggagtctggtataaaa
ctgagatatcaaggatcgtggaggataataattgatgttatcagtaaattttttgaatta
tttggcaaactgtgtccggaaaggttgacaaaatgcttggtctccctgtgtaatttacat
aacagtccaggtattcaatgtcgtcgagagctggaaaagacggttggaatggcatttcga
gtgatgggaccgaaatttgtcttgcaagtcgttcctttggatttggacaaagacgcaaat
atttgcgagtttcctcgtagctggctgctgcccgttatgagagaccatattcaagagact
gaaatgattttctttttcaaaacattcctacctcttgccgattctctacgggaaaaagcg
gagaaactcaaggcaaacaaaagtgatctggaggctaaagtctttacaacattaagtttg
cagatttgggatactttgccatcgttttgtacgaaaccgaccgatttactgcagagtttc
aagtcagtagcgaaaacccttgggtctttattgaatgaaagagatgatcttcgaggaaga
atatgtcaagctattcggctgcttgtatcaagaaatctagacaatgaggagtacgtcaaa
gaattgtcaagatatgcaaagaactatttgccgatattgttcaacctttatacagcgtgt
gaggagaaaaacgattcagtttccttgcctattttgggaactttaaagacctatttacaa
atcacggacaagaagctggttgaacagtttttcaaaaaagccttcgacagagtgaaatct
actgacacgccctcagctaaaaagcatatgctgatggacttaatcattgcaatggttcaa
tatctgaacgatgaagatcttgaagtcttgtatgggacaatagaacaatggcttaaggct
aaagattcaaaacttcaaaagaaatcgtacagaattttggaagagatttgttgtgcagga
tccgctgaagaatactttctttctcatgttgaggacatccaaaaggtcatggaggaaagt
ttaaacgtggcctcgtcagtttccaaagcgccccgacttcgttgtttaatacaaattgtt
aagaaagtacagccgggacaagaaatgtttctcaatacaattatcccagaggtcattctc
tcaacaagagaagtcaactcgaaggcaaggtctgcatctttaaaactgttggttcaaatt
gctgaaacgtacattcgttgctcacagcaaagtaccgaagcttgtattgatacatttttg
ggcacattagtcgctgggtttggaggctcgccaaacatggtcagcggtactatcatcgcc
atgtcaaaaattctatatgaatacaaaggtcgttatacagcgaaagttttgaatcagctc
attgaaaccacaactaatttgttacaatcaaacaagcgagaaattgtgaagtcagctctc
ggtttctttatggtcgccctacgtgttacaagttctgaagaattttcaccctacctaaaa
aacttggtctcaggtcttgtaaattggagcgatgaaagccgaaataagtttcgtttcaaa
gctcaagtgttgttcgaacgactcattagaaaatacggatataaagtcatttatgatttg
gttccagaagaacatcgcaaattcgtacgcaatatacataagcgagtagaaagaggaaaa
cgcaagaaggtggaaggtcatagccacagcgagttatacaaactgaaggaaaagagcggt
catattgatagttatgaagatctaatgtttgggtctgatgatgatgaagatgatgctgaa
aacgataaatcttcactgcataagaataaaaatttaaagaaaaagtcaatccctaaagct
tttatacaagagagcgaacctgacgaaccgttggatttactcagctccaacatttctcag
catataacagcaacggcaccattgacgaggcgctctaaagattctggatttgaattaacc
gaagatggacgcttgattattcctgatgaaaatgaaacaaacacgaagaaatctgaaatt
ccttcaggttcgtccattcttcgtgaagatatggaattggaaccttcttcggtattggcg
gacaaacggaagagagttgtatcagatgatggaacagaagaagcagtagttggtaaaaag
tcgaaatttaacgaagattttggagaagaatatagggccaagaaagccggtggtgatatg
aagaagaaaggcaaaccagatccttatgcttaccttcctctcaatacaaatgtcttaaat
aaaaggaaacgggcgaaacttacaggacagtttaaaggaattgttaaaggagtgaaaaga
ggttctcagaaatcgaagaaatttcagaaaagaaaataa
DBGET
integrated database retrieval system