Xenia sp. Carnegie-2017 (soft corals): 124444393
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Entry
124444393 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 48-like
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xen01002
]
124444393
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124444393
Enzymes [BR:
xen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124444393
Peptidases and inhibitors [BR:
xen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124444393
Ubiquitin system [BR:
xen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124444393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
124444393
NCBI-ProteinID:
XP_046850959
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MAVSRNKTRKSQKDAWEWINSVHPDEIGLEHLERAYRIHSTCSDKNTHRSNCKSNPNCFN
CLGERFWLKEIKDDTWCNGIVDPHEHRRVEGMFVGLKNLGATCYVNTLVQLWFHNEEFRS
ALYSWIPFEFNVGLSQREDDQVIAMETNDKTESTQLKCDVKVDIKTENKKCDDNECGATD
IVCPPIPLCKPWENSKKPQSFCQHLQLLLAQLQYTARRFVDPAPFVESLGLNTELQQDAQ
EFSKLFMSLLEDTLSQQPNPLVRNIVQQQFGGSYSYITRCCQCGRQSQRSSRFYELDLNI
QGNTNLAQCIREFLKEENLDGDNQYYCSHCMNKQDATRYIKLQEXPPVLNLQLLRFVYDR
KSGCKKKLNTVIWFPEVLDMKEYVDAKIEGRVYDLTAVLIHRGLSAYSGHYIAHIKDKKS
GDWYRFNDELTEKMKGRSLNLDSEEDLHDTINGCVNAKKPKLSKAGSSSKDAYMLVYRQR
GEEKQAIAQEPPADIQMLVAEDNSKIEEWIKDVKDIRDRRICFGKSKQAEVQNVLKMLPV
KEGEKNYDWISSDWLRTWLSNDQKQQLGCIDNNSLLCQHGKLHPDKVLCAKRISTNAASF
LFKAHNGSPRLNSDSFCLKCVRERCRSLQFSSRMCKDQKFFGKALKAACEERGFWVSRKS
LQKWKVLAQNCNGNLTTSDLTRPHDMSTSDLRTPAEETEMKLTTGFDACKRSQASTYDGN
STVADMDTECKSGVSRLDVGSSGVSRLDVGSSGVSRLDGDQGDAKIGKSNEDILCEHGNL
STLTASRRLVSEEVWERLRFYFSNSPEFSWDQTVCSICSYRDKEVEKRLEDLKQLASQQR
SLLGDLFNEKERPDFKAKESVTAFALSRNFYDNWKRFIRSMSSRRVRPSCITNKILMCPH
ERFLYHPQCNDVDGASSALVYLWTVEWEVLSQAFGYDIEIKLVQNIFEGQSLYTITPDCC
AECNASLIAENSCDNEVYEYAKIYVRKITKDHSEEDIQNILENHNPIENNHEDCEQIPSS
YQNGNTSSKDYRRRSSRHRKQRGEVMIMVDSSETVRDVKLELMKQFSAMPLDQHLSMNGR
MLEDDMTLGVAGVRPGSILLLKVDEPEEGRAQEEIARVSREPEQGFKGTSLLNQQLAI
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttcgagaaacaaaacacgaaagtcacaaaaagatgcatgggagtggattaat
agcgtccatccagatgaaattggtcttgaacacttggagagagcatataggattcattcc
acctgcagtgataaaaatacacatcggtcaaattgcaaatccaatccaaattgttttaat
tgtcttggggaacgattttggttgaaggaaatcaaagatgatacctggtgtaatggcatt
gttgacccacatgagcatagacgagttgagggaatgtttgttggtctgaagaatttaggt
gcaacatgctacgtaaatacattagtgcagctgtggtttcacaatgaggaattcaggtcc
gcactctattcttggattccttttgaattcaatgtaggattgagtcaaagagaagatgac
caagtcattgctatggaaaccaatgataaaactgaaagcacgcagttaaaatgcgatgtg
aaagttgacatcaaaacagagaataaaaagtgtgatgataatgaatgtggagctactgat
attgtgtgtcctccgattcctctttgcaagccatgggaaaacagtaagaaaccgcaatct
ttctgtcagcatttgcagctattactagcgcaacttcagtacactgcaaggagatttgtt
gatcccgcgccgtttgttgagtctttgggactgaacactgagttacagcaggacgcgcaa
gaattttccaagctgttcatgtctttacttgaagatactttgtcacaacaacctaatccg
ctggttagaaacattgttcaacaacagtttggaggatcttattcctacatcacaagatgc
tgccaatgtggtcggcagtcgcagaggagctcgagattttacgaacttgatttgaacatc
cagggaaacacaaatttagcgcaatgcatacgtgaatttctcaaggaagagaatctagat
ggcgataatcaatattattgcagtcactgcatgaataaacaagatgccacgagatacatt
aaattacaagaanctcctccagttctcaaccttcaactgttacgattcgtttatgatcgg
aagtctggatgtaagaagaaattaaatactgtaatttggttccccgaagttctcgacatg
aaagaatacgttgatgcaaagattgaaggccgtgtatacgatctaaccgctgtccttatt
catcgcggtctcagcgcatactcaggtcactacattgcccatataaaggataaaaagagc
ggagactggtatcgcttcaacgatgaattgacggaaaaaatgaaaggaaggtcgctaaat
ttggactccgaggaagacctacatgacacaattaacggttgcgtgaatgcgaaaaaaccg
aaattgtcaaaagcaggatcgtcttctaaagatgcgtacatgctggtctatcgtcaacgt
ggcgaagagaagcaagccattgcacaagaacctcccgctgatatacaaatgcttgtcgct
gaggacaacagcaagattgaggaatggatcaaggatgtcaaagatatacgagatcgaagg
atttgctttggaaaaagtaaacaagcggaagttcaaaatgttttaaagatgttacctgta
aaagaaggggaaaagaattatgattggatatctagcgattggttgaggacatggctttca
aatgatcaaaaacaacaactgggttgtatcgataacaattcacttctttgtcaacatggc
aaattacatccagacaaagtgctttgtgcaaaaagaatttctacaaatgcggcatccttt
cttttcaaagctcataacggatctcctagattaaacagtgattccttttgtttgaaatgt
gtgcgagaacgatgtcgaagtttgcaattctcatcacgcatgtgcaaagatcaaaagttc
tttgggaaggctctcaaggcggcttgtgaagaacgtgggttttgggtaagtcgaaaatcc
ctacaaaaatggaaagttttagctcaaaattgtaacggaaacttaaccacaagtgactta
actcgaccacacgatatgtcgacgagtgacttacgaacgcctgcagaagaaaccgaaatg
aaattgacgacaggttttgatgcatgtaaaagatcacaagctagcacttacgatggtaat
tccacggtggctgatatggatacggaatgtaaaagtggggtatctcgattagacgtggga
tcaagtggggtatctcgattagacgtgggatcaagtggggtatctcgattagacggggat
cagggagatgcaaagatagggaaaagtaatgaagatattttatgcgagcacggtaatcta
tccactttaacggcttcaaggcgactcgtgagcgaggaagtatgggagagacttcgcttt
tatttttcgaattcgccagagttcagttgggaccaaaccgtctgcagtatttgtagttat
cgtgataaagaggtagaaaagagattggaagatcttaagcagttggcttcacagcaaaga
tctctcttgggagatttgtttaacgaaaaagagagaccagattttaaggcgaaggaatct
gttactgcgtttgctttgtcgaggaatttttatgataattggaagagatttattcgatca
atgtcgtcacgtcgtgttcgtccctcgtgtatcacgaacaaaatcttaatgtgtcctcac
gaaagatttctctatcatccacaatgtaatgatgtcgatggtgcgtcttctgcacttgtt
tatctctggactgttgaatgggaagttttgagtcaggcatttggttatgatattgagatt
aaactcgttcaaaatatatttgaaggtcaatctttgtacaccatcactccagactgttgt
gcggaatgcaacgcgtcgttgattgcggagaattcctgcgataatgaagtgtatgaatat
gccaaaatttacgtgaggaagataacaaaagatcacagtgaggaggatattcaaaatatt
ctcgagaatcacaatccaatagagaataatcatgaagattgcgagcagattcccagttca
tatcagaatggaaatacgtcgtcgaaagattaccggagacggagctcaagacatcgtaag
caacgtggtgaagttatgattatggttgattcatcagaaactgtacgtgatgttaaactg
gagttaatgaaacaattttccgcgatgcctttggatcaacatctcagcatgaatggaaga
atgctggaggatgatatgaccttaggtgtagctggagtgagaccagggagtatcctatta
ttaaaggttgatgaaccagaggaaggaagagcgcaggaggaaattgcacgagtgtcaaga
gaacctgaacaaggtttcaaagggacaagcttgttgaatcaacagctggcaatttag
DBGET
integrated database retrieval system
