Xenia sp. Carnegie-2017 (soft corals): 124444717
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Entry
124444717 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase 2-binding protein 1-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124444717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xen03032
]
124444717
03400 DNA repair and recombination proteins [BR:
xen03400
]
124444717
DNA replication proteins [BR:
xen03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
124444717
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
124444717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
TopBP1_BRCT0
Motif
Other DBs
NCBI-GeneID:
124444717
NCBI-ProteinID:
XP_046851309
LinkDB
All DBs
Position
Unknown
AA seq
1605 aa
AA seq
DB search
MRTGIFYCGPLKSLNQELNVTKIHAKDLMEAGAREKMTVFVTDRFEGEVFELLLAENKRV
FGPICILECIESDSPLPNALHPVYSMSMTDLIVASTSIAKSLRKKLQILIEYMNGVFAAE
FTIEVTHLVAGEVNSKKYATAARLKKPIVLPSWIEDSWKESQVQMNFNATHSSFLESHYC
PIFKGCSICVSGFETKKRNEIKRLVEMNGGSYLPELSCDKSTHLLIEKPVGNKFHFAQRW
SVICVEPCWLYECISAGHWLDEAPFKVKPDKQSKLSDAGDETLRTSHVDASINYTMSSEE
MSKKARDIAKKSAEKAGHAMLGNGAQESSSQKRKAVIGHRYHKSLHSVKRKSICNYNVPI
PSDTMFLDGCQLYLVGFNDVQLEYLQKIINAGGATRFNKINDNVTHIVVGDEPLQDVLKL
VNDEFAPHVVKVDWLLESCRQSKCLSEEEYYCMETNDNVEENQKTKKKKNCDSKERRVSE
NDVTRNDEDILKQYLTDPGNTNQSMSYVNKSSIMHCQEGDESQKECSKLLKGFRFRMNGF
DGKQLNEIRKCIEDLGGCVLPISSMSIVDYLIVPLKYECLQGTYAKTVVTYCWLQSTITC
GEMVDPDSDFLFTPFALPENVYPLENCVISVSQFYDLERXNLSDLIETLGGQFQEFFSRK
AKENVHANTHLILKQPLGAKYDAAVKWGIPPLTVDWLYECARSGRKVDETPYLVTVGTPS
ETIEPGESTRDEIGKDTEDNVGQVKDKGEELFNEFAAPRSDVRSGENRVEMNGNNEKTNT
AKEKAPRLKALFKKAPSCKPRRPSYDLTEVMDCLQSPCPSSGSSSSNSRASRSSRSSFLM
DDYIQEHLQAGLKNSGCLIESRKESTLDNEGSHVGVEGCVVDSEGSRAAHKDASIVPGGG
VIGDGNVSSIDEGRSITSGPLDPYKSKSRRLAVERDRANGKDAEQIGIERERSDINDGEQ
IGIERERSDVNDGEQIGIERERSGVNDGEQIGIERERSGVNDGEQIGFRRKKSDTKDGEK
VRVKDLEKHIQPSNPLFLSNVVLVASKKCGKRMSELRTLAISVGAQFRESLDKTCTHYIC
EGRLSREQSKAKSSGVHVVSPHWLYDCVDRQFHLDEVLYPSSYNPKLSLSVVKTKGTVRN
LKNMDAETTKVIDQKAKSSLPVPPISQENVTVNEATAHVPALMSQDSAETDSLQTREELK
QIQDLMQSMKATRRRSGRLQTSGNSSHSRNSSESNEKNGRHRRSSTRLRSLRSSKSFQDE
EDDAEQSMMGGITYDDPKSRQERQKIIAQLDECSPSVSSSLSNITKITHETPVKKESLSP
SSPIHSSTPAAPPPIALHITTKSSLPEPVSLLNPADDVRTEEKPRPRFTLSSMTQQEKID
YCAMIENLGGVVFEAQYFNSASRHTVTGQLNRNEKCLSSIAAGNWLLRKSYLEECREAQC
FVDEEPHEWGVALPGQSVTLWGLTSRYWRVELAKKSAEFHKKIGAFQDWKVLLCVEEERA
GSFSRMLEAGGAKVLGTTPPFQNIETVTHAFINPGATHVNKIDYGRLEAAGISVLRTEYI
VDYLTARDTPLDTSKYLYHPQLSSSKKRKQATTTSETHGKRKKPN
NT seq
4818 nt
NT seq
+upstream
nt +downstream
nt
atgaggacggggattttttactgcgggcctttgaaatcgctgaatcaagaactcaatgtc
accaagatacatgcaaaagaccttatggaagctggcgccagggaaaagatgacagttttt
gtcaccgatagattcgaaggagaggtttttgagctgctgcttgccgaaaacaagagagtt
tttggacctatctgcattctggaatgtattgaaagcgactcacctcttccaaatgcatta
catccagtttattcaatgtccatgactgatttgattgttgcctcaacttccatcgctaaa
tcattgaggaagaaacttcaaatcctcattgagtacatgaatggagttttcgctgcagag
tttacaattgaagtcactcaccttgttgccggtgaagtcaacagtaaaaaatatgcaact
gcagcacgtcttaaaaaaccaatagttttgccatcgtggattgaagactcttggaaggaa
agtcaagttcaaatgaatttcaatgcgacccactcctcatttctggaaagtcattactgt
ccaatattcaagggatgctcaatatgtgtgagcgggtttgaaacaaaaaaaaggaatgag
atcaagagattggtggagatgaatggaggtagctatttgcccgaactctcgtgtgataaa
tccactcatttactaattgaaaaaccagttgggaacaagtttcattttgctcaacgttgg
agtgtgatttgtgtcgaaccttgttggctgtacgagtgcatatctgccggccattggctt
gatgaagcacctttcaaggtgaaaccggataaacaatccaagctttctgatgctggtgat
gaaacattgcggacaagccatgtggatgccagcattaactacacaatgtcaagtgaagaa
atgtcaaagaaagccagagatattgcaaagaaaagtgctgaaaaagccggacatgccatg
cttggtaatggtgcacaagaatcatcatcacaaaaaaggaaggctgtgattggacataga
tatcataaatcgcttcattctgtaaagagaaagtccatctgtaattataatgtacctata
ccttctgataccatgtttcttgatggatgtcaactttatttggtcggatttaatgatgtg
caacttgaatatcttcaaaagataataaatgcgggtggtgctactagatttaacaaaatt
aatgacaatgttacgcatattgttgttggcgatgagcctttacaagatgtcctaaaacta
gttaatgatgaatttgcaccacatgttgtaaaggtcgattggctactggaatcatgtcga
cagtcaaagtgcctttctgaagaagagtactattgcatggaaacaaatgacaatgtggag
gaaaatcaaaaaacaaagaagaagaaaaattgtgattcaaaggaaaggagagtatcggaa
aatgatgtgactcgaaatgacgaggatattttaaaacagtatttaacagatcctggaaat
accaatcaatcaatgagctacgtgaataaatcatcgatcatgcattgccaagaaggagat
gaaagtcaaaaagaatgtagtaagctgttgaagggctttcggtttagaatgaatggcttt
gatggaaagcaactcaatgaaatccgtaaatgcattgaagaccttggtggttgtgtatta
ccaattagtagcatgtctattgtagactatcttattgtaccactgaagtatgaatgttta
caaggcacttatgctaaaacagtggtgacatattgttggcttcagtccacaataacctgt
ggtgaaatggtagatcccgactccgattttctattcactccctttgcgctacctgaaaac
gtgtatccacttgaaaactgcgtcatttccgtgagtcaattctacgatctggaaaganat
aatttaagtgatttaatagaaacattggggggacaatttcaggaatttttttctcgcaag
gcaaaggaaaatgtgcacgcgaacactcatctcattttgaaacaaccgctgggcgccaag
tacgacgcggcggtcaagtggggtattccccctctgactgttgattggctttatgaatgc
gcacgcagcggacgaaaagttgacgaaacaccttacttagtgacggttggaacaccgagt
gaaaccattgaacctggggagagtacgagagatgaaattggaaaggatacagaggataac
gtgggacaagtaaaggataaaggggaggaattattcaatgaatttgccgcgcctcggagt
gacgttagaagtggtgaaaatcgcgtagaaatgaatggaaacaacgagaagacgaacaca
gcaaaagagaaggctccaagactaaaagctcttttcaaaaaagctccttcgtgtaagcct
cggcgaccgtcgtacgatcttaccgaagtcatggactgtctccagtccccttgtccgtca
tctggcagcagcagtagcaatagccgcgcaagccgcagtagtcgaagtagctttcttatg
gatgattatattcaggaacatctacaggctggattgaaaaactccggttgtcttattgag
tctcggaaagaatcaaccctggataatgagggatcccatgtgggcgtagaagggtgtgta
gttgatagtgaggggtcgcgtgctgctcataaagatgcatcaattgtccctggtggtggg
gttatcggggatggaaatgtatcctccatagatgaaggtagatctattacaagtggtccc
ttggatccctacaaatcgaagtcaaggagattggcggtagagagagatcgagctaatgga
aaagatgcggagcaaattgggatagagagagaaagatctgacatcaatgatggggagcaa
attgggatagagagagaaagatctgatgtcaatgatggggagcaaattgggatagagaga
gaaagatctggtgtcaatgatggggagcaaatagggatagagagagaaagatctggtgtc
aatgatggggagcaaataggctttcggagaaaaaaatccgataccaaggacggagagaaa
gttcgggtaaaagatcttgaaaaacatattcaaccgagcaatccgctgtttctttccaac
gtcgtgcttgtcgcatcgaaaaaatgtggaaagcggatgtctgaactacgtacgctggcc
atttccgtgggcgcacagtttagagaaagtttagataagacatgtactcattatatttgc
gagggtcgtctatcaagagaacagagcaaagcaaagtcaagcggtgttcatgttgtctcg
ccgcactggctgtatgattgtgttgatcggcagtttcatctcgacgaagttttgtatcct
tctagttataatccgaagctctctttgtctgtcgtgaaaaccaagggaacggtacgaaac
ttgaaaaatatggacgcggaaactaccaaagttattgaccagaaagcgaaaagctcgttg
ccagtccccccgatttcacaagagaatgttaccgtgaatgaggcgactgcgcatgtgcca
gcactaatgagtcaggattcagctgaaactgattctctgcaaactcgcgaagaactgaaa
cagatacaagatctcatgcagtccatgaaggccacccgccgtcgcagtggtcgccttcaa
acatcagggaactctagccattctcggaattcgtcggaatccaatgaaaagaacggtcgt
cacagacggtcgtcgactcgtttgcgatcgcttcgatcaagtaagagctttcaagatgaa
gaagatgacgccgagcagtcaatgatgggtgggatcacgtatgacgacccaaaaagcagg
caagaaaggcagaaaattatagcgcaattggacgagtgtagccccagtgtttcgagcagc
ctttcgaacattacaaaaatcacgcatgaaacgcctgttaagaaagagtcactatccccc
agttcccctatccattcctctactcccgcagctccaccgcctattgctctgcacatcaca
acgaaatccagtcttcctgagcccgtgagcttgttaaatccagcggacgacgtgagaaca
gaggaaaaaccccgtcccaggttcacgctctcttccatgacacagcaagagaaaatagat
tattgtgctatgatcgaaaatctcggtggagtagtgttcgaagctcaatattttaattcg
gctagtcgtcatactgtcactggacaattaaacaggaacgagaaatgtctctcttcgata
gccgccggtaattggttgttacgcaagtcgtatttggaggagtgtcgtgaagcgcagtgc
tttgttgatgaagaacctcacgaatggggtgttgccttgcctggccaatctgtgacgtta
tgggggctgacatcgcgttattggcgcgttgaactggcgaagaaatcagctgaatttcat
aagaaaatcggagcattccaagactggaaggtcctactctgtgttgaggaggaaagggct
ggctcatttagtcgtatgctcgaagccggaggcgcaaaagtactgggaacgactccaccg
tttcaaaacatcgaaactgttactcacgcatttataaatcctggggcgactcatgtcaac
aagattgactacggtcgtcttgaagctgctgggatatcggtactgagaactgagtatatc
gttgattacctcactgcccgtgatactcctctagatacatcaaagtacttatatcaccca
cagctgtcatcatctaagaaacgcaaacaagccaccaccacttcagaaacacatggcaag
cggaagaaaccaaactag
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