Xenia sp. Carnegie-2017 (soft corals): 124444776
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Entry
124444776 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124444776
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124444776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124444776
NCBI-ProteinID:
XP_046851391
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MSKNEREVLSESFEHDDESDYKENNGKSRKQKAWVTASLRSHNGRIKSFIRKVQRGSSVR
FVCIEEEELQDMDITETDDFQRNILHHAVSKPNTLKEILKVFKDDARISEALREADKVGE
LPIHRAAVLGNTESLEMLYGHDTTLMLLRTTKGNESVLHSAVKSRSLLVVKYILTCILKE
DPKLVNAVDNLFQSPVHYAAAFKQSNVLELLLSYGCDSTLIDTNDQIPLHIACSKGFLKN
VQLLVQEHPDTIDLIDHSAQTPLILAAKYGFPKIVSYLLASKADFSLKDKIDFTAFDWAL
QRNLPAIVESFQNTANWKEILKESKNGPENSLCVMIAGMPEMAKLLLDKCIETKENRGNG
CMVTYDFFCLESKDNNGAWPKFAALEMMTKQACEICLQHPVSKKYVNVKWKRRGFKYFVS
LLIFDLVFHILFLVYTTEIIGGFHSYKHINRTGGKNTTMTENKRRSQPLNASAMIFLRVI
MLIITFASLTKELVQIFVERFNYFKDFYHWLRLVLILCVIFYILPLRQELTTSEIGFGAI
ICLFSWTNFMQVLKLTPIFGLYLNLIEKVVWTLMKIFAVVVVYILTYSTTFYILLAEDHS
FGNMYISFFSTFVAMMNGFENNDLFLKKGMYPQLFHIKLFVLLLFLLIMSIVVQNVLIGL
AVGDTHEVMKLATFGKLKRRANFVISLERALNKIPYFSSKDDQCLVEFSRQKEDLTQDVL
DKIIFSDIELDDVELEDKDNHYNREFEVALEDHIENAMNMKLENLRSALMDKLKEMEDEM
KYMIEENIDKVLAKFEEQR
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagaacgagagagaagtcttgagcgaaagttttgagcatgatgatgaatccgat
tataaggagaataatggcaaaagtaggaaacagaaagcttgggtcacagcgtcccttaga
tctcataatggacgaataaaatcttttataagaaaggttcaacgtggttcatcggtgagg
tttgtgtgtattgaggaggaagaacttcaagacatggatataacggaaactgacgatttt
caacgaaatatcctccatcatgctgtatctaaacccaataccttaaaagaaattctaaaa
gtgtttaaagatgatgctcgtatttctgaagctctacgcgaggcagataaagtgggagag
ttaccaatccatcgggcagctgtactgggtaacactgagtccttagaaatgctctatggt
cacgacacgacactaatgttgttaagaacaacgaaaggaaatgaatctgtacttcattca
gctgtgaaatcaaggtcacttcttgttgtaaaatacattctaacgtgtattcttaaagag
gatcccaaattggtcaatgctgttgacaatttgtttcaatcgcctgttcattacgcagct
gcattcaagcaatctaatgtcttggaacttttgttatcttacggatgtgattctaccttg
atagataccaatgatcaaataccgttgcatattgcctgcagcaagggattcttgaagaac
gtccagctacttgtgcaagaacatcctgacacaatcgatttgattgatcattctgctcaa
acaccattgatacttgcagctaaatatggttttccaaagattgtctcttatttacttgca
agcaaagctgatttttctctgaaagacaaaattgattttacggcctttgattgggctttg
caacgcaacttgcctgcaattgttgaatcatttcaaaatacagccaactggaaagagatt
ttgaaagagtcaaagaatggtcccgaaaattctctgtgcgtaatgatcgcaggtatgcca
gagatggccaagttgcttttggataaatgtattgaaactaaagaaaatcgtggaaatggt
tgcatggtaacgtatgatttcttttgtcttgaatcaaaagacaataatggtgcatggcca
aagtttgcagcactggaaatgatgacaaaacaggcttgcgagatctgtctacagcatcca
gtttcaaagaaatatgtcaatgtaaagtggaagagacgtggttttaaatattttgtcagc
ttactgatattcgatttggtttttcacatattatttcttgtttatactaccgaaattatt
ggcgggtttcattcgtacaagcacattaaccgtaccggagggaaaaatacaacgatgaca
gaaaacaaacgtaggagtcaaccactgaatgcatctgccatgatcttccttcgtgtgata
atgttgataataacatttgcctctttaacaaaagaattagttcagatttttgtggagcgc
ttcaactatttcaaggatttttatcattggctaaggcttgtgctcattctgtgtgtgatt
ttttacatactaccattgaggcaagagttgactactagcgaaattggctttggtgccata
atttgtttgttctcgtggacaaacttcatgcaagtcttgaaactgactcctatttttggc
ttataccttaatctcattgaaaaggttgtctggactcttatgaagatttttgctgttgtt
gttgtgtatatactgacctattccaccacattttacattctcctcgcagaagaccattca
tttgggaacatgtacatatcgttcttctcaacattcgttgctatgatgaatggctttgag
aacaatgatttgtttttaaaaaagggaatgtatcctcagttatttcacataaaactcttt
gttcttctcttgtttttgctgataatgtctattgtggttcaaaatgtgcttattggctta
gctgttggtgatacccatgaagttatgaagttggcaacctttggtaaacttaagagacga
gcaaactttgtcattagtcttgagagagctctgaataaaataccgtactttagctccaag
gacgatcagtgtctcgttgaattttcaagacaaaaagaggatttgactcaggacgttttg
gataaaattattttttccgacattgaactggacgatgttgaacttgaagataaagataat
cactataatcgtgaatttgaggtggcgttggaggatcatattgagaatgcaatgaatatg
aagcttgaaaatcttcgttccgccttgatggataaactgaaagaaatggaagatgaaatg
aagtatatgatagaagagaatattgataaagttttagcaaagtttgaagagcagcgctaa
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