Xenia sp. Carnegie-2017 (soft corals): 124445171
Help
Entry
124445171 CDS
T08024
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124445171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124445171
03036 Chromosome and associated proteins [BR:
xen03036
]
124445171
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124445171
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124445171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
124445171
NCBI-ProteinID:
XP_046851833
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MFGSTPFGSSAFGSNTSAFGNTSGSTFGSSGFGSGGSLFGAKTTATTGFGTVAPSQTGSS
IFGNNTTGSTGLFGAGTNQAKSGFGGFGTNTSTGGLFGNTGSSGTGLFSGSTNAFGSANK
SIFGGSTNNTGSLFGSSTTTNSGTSLFGAKPQGTGSLFGLSNSNTGGLFGNTAAGGQNAA
GTPTKFNAQKSTDTMVKSGVQTSISTRHQCITLMKEYDEKSLEELRMEDYQLGRKGPQAS
GTTAPATGMFGNSTFGTSSGTTTFGSGGFGSSTGTGLFGQTQQSSNIFGAKTTASLFGNS
TSTFGASSAFSNTSGGSLFGNKTGGLFGSTTTTQSTGVFGATPAFGSASSGGGLFGNSTF
GQNTQASAFGSSSQSGGLFGKPAFGATNSSGTGLFGAANFGQTTQSSLFSAKPTGGAFGT
ANTGGLFGGPNKPTFGTTFGTGTAAANPFGGTTGTGLFGNSSLGFGNAGSSLGQPSMLGG
AFGQTTLGAAGTGTLGFGQNNLAALQQQQQLQQQLQQQVLALSSSPFGDSPLFRNLTSRT
KPEKPLSLPSQAKPRGSSAPSQYKVSPRPSARIKPRAIGKLNFSQARLFDGLDDEIEYTG
ETFVPRRSVKKLVLNSKSQTRSIAGELSEYTQSKENGRNAVQETLNNTQTEHLRKSFIPP
KNAKNATSGVENSSRNEEEEEIEEQGPEPRENGTSFKETHNTKGSGVKLKRAEYYCIPSV
AELDDMVDENGDVMVEDFVVGREEFGMVKFFGRFNVAGFNLDEIVSFRRREIEVYPDTYP
DKPPVGEGLNRKSEVTLLKVWPNDKTTRSPIKNVDRLRKVGWLEKLETATERLGATFVDY
QSETGTWIFTVDHFTRYGLKEVQIDVENGNTRPSLRSLHEEKAAEMIVKMQQEKDAKIRK
TLKENNNNISFLEGEGDSQMSDISQEIFPEFQEPLDHDVNTASPASHHLATAMGVKSHRM
QVMKASFFGESKETRQYIDNNHIKQDELTLGNKSVMNGSGFDEISVGERLVYSSPPFLSF
PPFTLPSPSFDSILSFLSLYPFLPLILPSPLFTIPSPPFHSTLSSILEYENERNNNSQWY
SLPQPILLPSAIGSPSEMALKAAGLKTQPGIVPLSNSITAGKHNLFADAGLTMGRSFRVG
WGPGWTLVYPSRLAEVSSNPKNKFASREIVKGSPLIATSAKATQSSSFAISCAKVNVSPT
IKHNSDVCQNQLIERLKVSLANIVRHEDDYSTYLSPSEGVSALHQYADVAEKSKELLDST
NHQESAINFSLVMDLAIALWGNLSALSIESMDTESSLLDGYDEAIARKEALSHWLTKTSK
RKINEEIENIKSKDNNHLRIIFSLLTGKQISAACRVAQSNGDSRLSLLMAQASGNIIVRQ
WLLKQLDDWLEHKVDKFITSDRLKIYALLSGELAWRDIDVCQDLDWKRAFALHLWYQRPC
SGLITDALNAYENSYKGRTSSGIYAVEPCPSYIEKTDNTEKVYGEENEFENPPRDTCYHL
IKLYCKPSHRLEKTLAPASYTRYQLDVSLSWHLHQVLQAIGFKHLPEIHSGHLNTSYAAQ
LEAMGLWHWAIFVLMHIQDPQRRHAAVHNVLVRYCVLAGDADYCDKEAFLLNDLAVPLPW
IHFAKVIRSRMKNQPQDEAYHLVKSGCFDLAHGVILNRLASLAIINEEYQSIKELLVEIA
PRENSSQVNHWNTGGQIYLDYIKIWEAFNDIKNGLLVPSTYKLEKMQIEVSSLCHRINQL
PCKTATDRLCQCEMGTMCANFLKIIAKELVMQTDEGESYYVQSSVLAPHIEKLPLPEDCC
LTELRELTNSYVDELARL
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgtttggctctacaccatttggatcatcggcgtttggatcaaatactagtgcatttggc
aatacatctggatcaacatttggaagctcaggttttggaagtggtggaagtctttttggg
gcaaaaaccactgcaacaactggatttggaacagtagcgccatctcaaacgggctctagt
atttttgggaataataccactgggtcaactggtctttttggtgctggtacgaatcaggca
aaaagtggatttggtggatttggtacaaatacctctactggagggttatttggtaacact
ggctcatcaggtactggattgttctcaggcagtacaaatgcttttggaagtgccaataag
tcaatctttggaggatcaacaaataatacaggctcactgtttggatcatctactactacc
aacagtgggactagtttgtttggtgcaaaacctcaaggaacaggaagtttgtttggctta
tcaaattctaatacaggtggattgtttggaaacacagcagcaggcggtcaaaatgctgcg
ggaactccaaccaaatttaatgcccagaaaagtactgacacaatggtgaaaagtggtgtt
cagaccagtataagcacacgacatcaatgcatcactttaatgaaagaatatgacgaaaaa
agtcttgaggagctacgcatggaggattatcaacttggaagaaaaggtccgcaagcttca
ggtactactgctcctgcaacaggaatgtttggaaattccacatttggtacatcaagtggt
acaacaacatttggatcaggaggatttggatctagtactggtactggtctatttggccag
acacaacaatcaagtaacatctttggagccaaaacaacagcaagcttatttggaaattct
acatcaacttttggagcttcgtctgcttttagtaacacatctggtggctcactttttggt
aataaaacagggggactatttggttcaacaactacaactcaatcaactggtgtatttgga
gcaacacctgcatttggtagtgcttcgtcgggtggtggtttatttggaaactcgacgttt
gggcagaacactcaggctagtgcatttggttcatcttctcaatctggtggtttgtttggt
aaaccagcttttggtgccacaaattcgtcaggaactggattgtttggcgcagcaaatttt
gggcaaaccacacagtcgtcactgttcagtgctaaacctacaggaggcgcatttggtacg
gcaaatactggaggtttgtttggtggtcctaataaaccgacctttggaacgacgtttggc
actggtactgccgctgctaatccatttggtgggacaactggcactggattatttgggaac
tcttcgctgggttttggcaatgccggctcatctcttggtcagccatcaatgttggggggt
gccttcggacaaacaactttaggtgccgctggaactggaacacttggctttggtcagaat
aatttagctgcgttgcaacaacaacagcaacttcaacaacagttgcaacaacaagtactg
gcattgagtagctctccgtttggtgattcgccactttttaggaatcttaccagtcgtaca
aagccagaaaaacctttgtctttgccatcacaggcaaagccacgaggatccagtgcgcca
tcgcaatacaaggtatctccaaggccttcagcgagaataaagccgagagcaattgggaaa
ttgaatttttcacaggctcgcttatttgatggtctggatgatgaaatcgagtatacaggc
gaaacatttgtacccagaagaagtgttaagaaacttgtattgaatagtaaatcacagact
agaagcattgccggtgaattgtctgagtacacgcagtcgaaagaaaacggtcgcaatgcc
gtgcaagaaacactcaacaacacgcaaactgaacatctcagaaaaagttttattccccca
aaaaacgcgaagaatgctacaagtggtgtagagaactcgtcacgaaatgaagaggaggaa
gagattgaggaacagggaccggaaccaagagagaatggtaccagttttaaggaaacacac
aatacaaaaggaagtggtgtgaaacttaaaagggcagaatactactgcattccatctgtc
gctgagttggacgatatggttgatgaaaatggtgatgtgatggttgaggatttcgttgtt
ggacgtgaggaatttggaatggtaaaattctttggaaggtttaatgttgctggctttaat
ttagatgaaatagtgagctttcgtcgacgtgaaattgaagtttatcctgacacctatcct
gataagcccccagttggagaaggtctcaacaggaaatctgaagtgacattgttaaaagtt
tggccaaatgacaagactacgcgttcgccaataaagaacgtagaccgtctccgtaaagtt
ggatggcttgagaaattggaaacagcaacagaacgacttggtgcaacttttgttgattat
caaagcgagacggggacatggatatttactgtcgatcacttcacgcggtatggtctaaag
gaagttcaaatagacgtagaaaatggaaatacgcgtccttctttgcgttcattgcacgag
gagaaagctgctgagatgattgtaaaaatgcaacaggaaaaagatgccaaaattaggaaa
acattgaaagaaaataacaacaatatttcattccttgaaggtgaaggcgacagtcaaatg
agtgacattagtcaggagatttttccagaatttcaagaaccattagaccatgatgtaaat
accgcttcaccggcttcacatcacttggcaactgcgatgggcgtgaaatcacatcgtatg
caagtgatgaaagcgtcattttttggagaaagcaaagaaacacgacaatacatcgacaac
aatcacataaaacaagatgaacttactcttggaaataaatccgtaatgaatgggtcaggt
tttgatgaaatatccgttggtgaacgtcttgtttactcctctcctccttttctttccttt
cctcctttcactctaccctctccttcctttgattctatcctctccttcctttcactctac
cctttccttcctttgattctaccctctcctctctttactataccctctcctccctttcac
tctaccctatcctccattttagaatatgaaaatgaacgcaacaacaactcacaatggtat
agtcttccccaacccattttgttacccagtgctattggaagtccgtctgaaatggcctta
aaagcagcaggtctaaaaactcaaccggggattgtaccactttcgaattccatcaccgct
ggcaagcataatttgtttgctgacgcaggtctcactatgggaagatcgtttcgggtagga
tggggacctggatggacattggtgtatccatctagactggcagaagtcagttcaaacccc
aaaaacaaatttgccagccgtgagatcgtcaaaggtagccctcttatagcaacgtctgct
aaagctacacagtccagttcgtttgctatcagttgtgctaaggtcaacgttagtccaacg
ataaaacacaactctgacgtatgccagaatcagttaatcgagcgacttaaagtaagtctt
gccaacattgttcgtcatgaagatgactactcaacctacttaagtcccagtgaaggtgta
tcagcgcttcatcaatatgctgacgttgctgaaaaaagtaaagagttattagattctact
aaccatcaagaatctgccatcaatttctctttggtgatggacttagctattgcactttgg
ggtaatttatctgcgttgtctattgaatcaatggatacagaatcttcacttctggatgga
tatgacgaagcaattgctcgaaaagaagctctctctcattggttgaccaaaacatcaaag
agaaaaatcaatgaggaaattgagaacatcaaaagcaaggacaacaatcatcttcgcatc
atcttctcattattgactggaaaacagatcagtgctgcatgtcgcgtggcacaatccaat
ggcgactccaggctatcgctattaatggctcaggcatcgggaaatattattgtaagacag
tggttattaaagcagctcgatgattggctggaacacaaggttgataagttcatcacttcg
gatagattgaagatatatgctttattgtctggtgaattggcgtggcgtgatatcgatgtt
tgccaagatttggactggaagagagcgtttgccttacacttgtggtatcaacgtccctgt
agtgggctcataaccgatgccttgaacgcttacgagaactcatacaaaggcaggacaagt
tctggcatttacgctgttgaaccgtgcccatcttacattgagaaaactgataacactgag
aaagtttatggagaagagaatgagtttgaaaatccacctcgggatacttgttatcatctt
atcaaactatattgtaagccatcacatagacttgaaaaaactttagctcctgcatcttat
acaagatatcaacttgacgttagcctcagctggcacttacatcaagtacttcaagctatt
ggctttaagcatttacccgaaattcattctggtcatctcaatactagttacgccgctcag
ctagaggcaatgggtctttggcattgggcaatatttgttttgatgcatattcaagatccc
caaagacgtcacgctgcagtccacaacgtattggttcgttattgtgtactggctggtgat
gctgattattgcgataaagaagcatttttactaaatgatttggctgtacctcttccttgg
atccattttgcaaaggttattcgatcaagaatgaaaaatcaaccgcaagacgaagcatat
catcttgtgaagtctggttgctttgatcttgctcacggtgtcatattgaatcgtttggca
tctttagctattattaatgaggaatatcaatcaataaaggaattgcttgttgaaattgca
ccccgcgaaaattcgtctcaagtgaaccactggaataccggtggtcagatttatctggat
tatatcaagatatgggaagcatttaacgatataaagaatggtttgcttgtaccgagtaca
tataaactcgagaaaatgcaaattgaagtatcttcgctttgtcatcgtataaatcagcta
ccctgtaagactgccactgatagattgtgtcaatgtgaaatgggaacgatgtgtgccaac
tttctcaagataatcgctaaggaattggtgatgcaaacagatgaaggtgagtcatattat
gtacagtccagtgtacttgcacctcatatcgaaaaattgccacttcccgaggattgttgt
ctcactgaactgcgagaacttacgaacagttacgttgatgaacttgctcgactttaa
DBGET
integrated database retrieval system
