Xenia sp. Carnegie-2017 (soft corals): 124445214
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Entry
124445214 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: rab proteins geranylgeranyltransferase component A 1-like
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
xen01006
]
124445214
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124445214
Prenyltransferases [BR:
xen01006
]
Protein prenylation
Rab geranylgeranyltransferase
124445214
Membrane trafficking [BR:
xen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124445214
Endosome - Lysosome transport
Rab GTPases and associated proteins
124445214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
Motif
Other DBs
NCBI-GeneID:
124445214
NCBI-ProteinID:
XP_046851878
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MADELPSDYDAIILGTGMPESIVAAALARIGYKVLHLDRNDYYSGYWACLGFESLQKWIE
TVRNQKLEKQIVEVCDKAVEEIIYVPSDGKVIHNVEVQSFLSSSNQNTGNDSKAKEITNE
VADNTNKVTDNTNEVKDNSNKVTGHEENASGKVNEVLCDGAVGFTNNPEESPIVSSAKEY
NVEKKSFITNQEDVMNKKDDIDDCIEDTKNEQCEDDLFNEEKSRSSSIQKILVLMXFGYE
DKQVSESKVIDNDSDSSKVIDNDSDSSKDALDFCAGETEKSSKEHSNDIGSVGQRHMRKE
KNLNENSTYAELVEKSRKFNLDLSPKILFARGLLVETLINANISHYAEFKIISRILTKTD
EGIEEVPCSRSDVFSSKLINVLEKRALMRFMTFCLNYEDHNDQYEPYVNKPFKEFLISRK
LSENLQHIVLHSIAGVAENALTLCGLKATQKFLKSLGRYGNSPFLWSLYGTGELPQAFCR
MCAVFGGIYCLRKSVKSLVLNENKKKCVAVISDDGQRLNTKWLIMERSYAPECFNISSSS
TISRAILITNKSLKPAEQESISLLTMSNDSNPLRLIELPPSSMASPQSLYVVHLTTETVL
DATQDLRPYVNDLFQTRAGGVNNVEEKPFVLWSLYFNMETGVSSSTDTIPPICAKKIFSS
ICPDEDFLPAVPNPEDIIWDNIGCSPFEESEVKDDMNSGEKDCQISVENDREKSIDNECN
TSEKDLGTSEEKICEDS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaattaccttccgattacgatgcaataattttaggaacaggaatgccagaa
tcaattgttgcagctgcacttgctcgtattggatataaagtacttcatttagacagaaat
gactattattctggatattgggcttgtttgggttttgaaagtttgcagaaatggattgaa
actgtgaggaatcagaaactggaaaaacagattgttgaggtttgtgataaagctgttgaa
gaaataatttatgttccatctgatggcaaagtgatccataatgttgaagtccaatcgttt
ctaagcagttctaaccaaaacactggaaatgatagcaaagctaaggaaataacgaacgaa
gttgcagacaacacaaacaaagtcacagacaatacaaatgaagtcaaagataattctaat
aaagtcactggacatgaagaaaatgcctcaggtaaagtcaatgaagtcttgtgtgatggt
gcagttggatttactaacaatcctgaagaatcaccaatcgtttcatctgccaaagaatac
aatgttgaaaaaaaatctttcattactaaccaagaggatgtgatgaataaaaaagacgat
attgatgactgtattgaagatacaaagaatgaacaatgtgaggatgacttgttcaatgaa
gaaaaatcaaggtcgagcagtattcagaaaattcttgtgctgatgtgatttggttatgaa
gataaacaagttagtgaatcaaaagtcattgacaatgactcagattcatcaaaagtcatt
gataatgactcagattcatcaaaagacgcgttggatttttgtgctggggaaacagaaaaa
tcctcaaaggaacattccaatgatatcggtagtgtaggtcaacgacatatgagaaaagaa
aagaatttaaatgaaaactcgacatacgcagaactcgtagaaaaaagtcgaaaattcaac
cttgacttgtctcctaagattctttttgcaagaggattgcttgtcgaaactttgattaat
gcgaacatttctcattatgcagagtttaaaatcatcagtcgtattttaaccaaaacagat
gaaggcatagaagaagttccatgttcaagatccgatgtttttagcagtaaattaataaat
gtccttgaaaagcgcgcattgatgagattcatgacattttgtttgaattatgaagatcac
aatgaccagtatgaaccatatgtgaacaaaccttttaaagaatttttaatttctcgtaaa
ctcagtgaaaatcttcagcatatcgtcctccactcaattgctggggtcgctgaaaatgct
ctcacactttgtggtttgaaggcgacccaaaagtttctaaagtctttaggtcgctatgga
aacagtccatttttatggtccctatatggtactggagaacttcctcaggccttctgccgt
atgtgtgctgtatttgggggaatctactgtttacgtaagagcgtaaagtcgttggtgttg
aatgagaacaagaagaaatgtgttgcagttatttctgatgatggtcagcgtctcaatacg
aaatggttaattatggagagatcttatgctcctgaatgttttaacatttcaagcagcagc
acgatatcacgggctatacttataacaaataaatctttaaaaccagcagaacaggaaagc
attagtttattgaccatgtcgaatgattccaatccgttgcgtctaattgaactaccaccg
tcatcaatggcatctcctcaatctttatatgttgttcatttaacgacggagactgtctta
gatgctacacaagatcttcgaccttatgttaatgatttatttcaaactcgtgcaggtggt
gttaacaatgttgaagaaaaaccatttgtactttggtctttatattttaacatggaaaca
ggtgtttcttcttctactgataccattcctccaatttgtgcaaaaaagatattttcgtcc
atttgtcccgacgaagacttccttcccgctgtgcctaaccctgaagatattatttgggat
aatattggttgtagtccttttgaggaatccgaagttaaagatgatatgaattctggtgaa
aaagattgccaaatttctgttgaaaatgatcgtgaaaagtctatcgacaatgagtgtaat
acgtccgagaaagatcttggaacgtctgaagagaaaatttgtgaagattcttga
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