Xenia sp. Carnegie-2017 (soft corals): 124445318
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Entry
124445318 CDS
T08024
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03018
RNA degradation
xen03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124445318
09123 Folding, sorting and degradation
03018 RNA degradation
124445318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124445318
03041 Spliceosome [BR:
xen03041
]
124445318
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124445318
mRNA degradation factors
5'-3' decay
Lsm complex
124445318
Spliceosome [BR:
xen03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
124445318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
124445318
NCBI-ProteinID:
XP_046851998
LinkDB
All DBs
Position
Unknown
AA seq
125 aa
AA seq
DB search
MVLPLSLLRAAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTARDGDRFWRIPEC
YVRGSNIKYLRIPDEVIDMVKEDISKAKGRGRPGRGRGGGRGGRGGSGRGRGKPRKDQEG
GGVDR
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgccattatcactgcttcgagctgcacaaaatcatcctatgcttgtcgagttg
aaaaatggtgaaacatacaacggtcatttagtaagctgtgataactggatgaacattaat
cttcgagaagtgatctgcacggcgagagatggtgataggttttggcgtattcctgaatgt
tatgtacgtggaagtaacataaagtacttacgaataccagatgaagttattgatatggtg
aaagaagatatctctaaagctaaaggcagaggaagaccaggtcgtggacgtggtggtgga
cgaggaggtcgtggtggcagtggtagaggtagaggtaaacccagaaaagatcaagaagga
ggaggtgttgatagataa
DBGET
integrated database retrieval system
