Xenia sp. Carnegie-2017 (soft corals): 124445327
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Entry
124445327 CDS
T08024
Name
(RefSeq) pumilio homolog 3-like
KO
K14844
pumilio homology domain family member 6
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124445327
03009 Ribosome biogenesis [BR:
xen03009
]
124445327
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
124445327
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
124445327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPL
Motif
Other DBs
NCBI-GeneID:
124445327
NCBI-ProteinID:
XP_046852007
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MKIKKRTASEGPKSTKIKNRGKKFAVHMKNKKKKTLNTKRAISFGEKEVKTKGKDGKRTD
NTSFKNDLMKKNKQTQKLNIDSGDAGDSLSKRKREDYSSSSSQNKKLRGIKNDEVQTRLD
QKQLKLARRKRKQNYELTNILIKKYDALRRKDISSDKKRIMIDEVLDIIAGHCHEVVFKH
DTVRVLQMCIKYGSVEQRCKFFDQFKDNVSELALKKYSKFFIRKMMKYGTKEQRIYIICS
FNRKVKKYIRHQEAGEIVETIYNEYANSSQRKYLLQEFYGAEYSIGKISDARSLEEIIQS
DPHKKPHILRNLKETMVSLIEKSLVSHTIVHRAMLEFFTYADEKMRTEVIECLHEQLVLI
LHTSEGAKITMSCLWHGTPKDRKVIVKSFKGYVAKICKEEYGHVTMLAIFDCVDDTVLVQ
KVIISEMLSCLKELAENHHGRKVLLYLLAPRSPAYFSPNIIKTLSQGDGNKHSQKESSVR
RRELLSAISPSLIQFAAHNVKRLLFDKALSQFFVAIIHNAGDEVETAMKSAVKLASKELD
VDNDSEEDHVFKSASGHFAIKQLIQLDKKRIENDSKVLFSPLLMTRTDPEMLFNMCLFNR
GAFLVVSLLECSVPEVQKEVKQSLMPYVQKLKTVENTGVKIVMKLLKK
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaaaaaaaggacagcaagcgaaggacctaaaagtaccaaaataaaaaataga
ggtaaaaagtttgctgttcatatgaagaacaagaaaaagaaaacattgaatacgaaaagg
gctatatcatttggagaaaaagaagtaaaaactaaaggaaaggatggtaaacgtacggac
aatacttcttttaagaatgatttaatgaagaaaaataaacaaacacagaagttgaacata
gattctggtgatgctggtgacagtttgtcaaagcgtaaacgagaagactacagcagtagc
agttcccaaaataaaaaacttcgaggaattaaaaatgatgaggtgcaaaccagacttgat
caaaagcaattaaaattggctcgcaggaaaaggaaacaaaattatgaacttaccaatata
ttgattaaaaaatacgacgccttaagaagaaaagatatttcatctgacaaaaaacgtata
atgattgatgaagttcttgatataatagctggacattgtcatgaggttgttttcaaacat
gacactgtacgagttctacaaatgtgcatcaaatatggttctgtcgagcaacgatgcaaa
ttttttgatcaatttaaagataatgtttctgaactggctttaaagaagtactcaaaattc
tttattagaaaaatgatgaaatatggaacaaaggagcaaagaatctacattatatgctct
ttcaatcggaaggttaagaaatacattcgacatcaggaagccggcgaaatagttgaaact
atatataatgaatatgccaactcaagtcagaggaaatatctacttcaagaattctatggc
gctgaatattccattggaaagattagtgatgctcggtcacttgaagaaattattcaaagc
gatccacacaagaaacctcatattctacggaatctgaaagaaacaatggtttctttaata
gaaaagtcacttgtgtctcatacaattgtgcacagggcgatgttagaattttttacttat
gcagatgaaaagatgagaacggaagtgatcgaatgtttgcatgagcagttggtccttata
cttcacacgagtgaaggagcaaagataacgatgtcctgtttatggcatggaactcctaaa
gatcgaaaagtaatcgtaaaaagtttcaaaggctatgttgcaaagatatgcaaagaggaa
tacggtcacgtgacaatgcttgcaatctttgattgcgtcgatgacacagttcttgttcaa
aaagttatcatctcggaaatgctatcttgtttgaaagaacttgccgagaatcatcatggt
agaaaggttttactctatcttcttgctcctcggtcaccagcatatttttcaccaaatatt
attaaaacgttatcccagggtgatggcaacaagcatagtcaaaaggagagctctgtgcga
agaagagaactattgtcagctatttcgccatctttaatccagtttgctgctcataatgtg
aagcgattactttttgataaagctttgagccaattttttgtggcaattattcataatgct
ggagatgaagtggaaactgcaatgaagagtgctgtaaaattggcaagtaaagaactcgat
gtcgacaatgatagtgaagaggatcacgtttttaagagtgccagtggtcattttgcgatt
aaacagctcatccaattagataagaaacgcattgagaatgattcaaaagtgttgttttcg
ccgttgttgatgacaagaacagaccctgaaatgttgtttaacatgtgtctttttaacagg
ggagcttttcttgttgtaagccttctcgagtgttcagttccagaggtgcaaaaagaagtg
aaacagtcattgatgccttatgttcagaaattaaaaacagttgaaaatactggtgtaaaa
atcgtgatgaagttgctgaaaaagtaa
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