Xenia sp. Carnegie-2017 (soft corals): 124445584
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Entry
124445584 CDS
T08024
Name
(RefSeq) Down syndrome cell adhesion molecule homolog
KO
K06767
Down syndrome cell adhesion molecule
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xen04515
]
124445584
Cell adhesion molecules [BR:
xen04515
]
Immunoglobulin superfamily
DSCAM family
124445584
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
Ig_DSCAM-DSCAML_C
C2-set_3
Ig_6
Pur_ac_phosph_N
C2-set_2
Ig_ILCR1
MRAP
Motif
Other DBs
NCBI-GeneID:
124445584
NCBI-ProteinID:
XP_046852266
LinkDB
All DBs
Position
Unknown
AA seq
1754 aa
AA seq
DB search
MISIIFFILFTNAFVYSSKYSTPLRFVEEPSDLLFSSQNSGYLHCVAKATSNDNNDQQIT
ITWRFLNGSVVRNVSSLIVSLPNGSLWFKPFHEYVEDIHNSKYQCIANLTLHNQAILSKP
ASVKAVVLTQFDVMLRDQYVQRSGFSVSFRCIYPDKVKSYVKVAKWFVNKEPLKVAPKDN
LVVKDVQKSDSDKLYFCVVVNILTDEMVASNVAKIFIRNSADIAKVPLKFKLVPENRTVV
EGEQTEFECLVSKTNVLYTWNHNNITLRVSNRYRLINGRLKILKASLADTGQYFCIVRDQ
TTQEEISSSATLVVRVPLKFVTNLTKICTTYHVNATFSCDVSGYPSPRIIWYKNAKEIKN
NTKIIRNGTRLIITSTWGRDKGIYQCIASNGFETIHQAASLIVGTKAPIIVEAFKQQNLS
FSSKLDISCKAVGKEQLSLIWYKDGMIIEKTNDLRINLKHYHDLWTLQIKNLTAADSGLY
RCEVLNRAGSNHVEAAILVKGSIETYELIILEEGTRKTFVCHQCIKWTFNNVIDKTRISV
KKVLDMCILNLDYIIKNDAGKYTCYKKVDDEVSKEVTEIFVITIPRFTRDHSPNFTSVVE
NNDITLRCGGSGFPRPRTTWRRQIGGNFEEIVESSRFQLIDDGSLKISNVTLQDERDYSC
EISNSHRSRADLTITLNVNIPAKIINWRYTEFAIAGNKTNLYCEGIGEKRLEITWFKNQQ
KLFESTNLMISRVGEISVLTLLRVARKDAGKYICKIFNSFGKDEKSLELRIRDKPNPPIL
DKYKNEKRSVTIYWTPPFDGESPITGYTIVYEGTTYPFIRKYIAIAATNSCKIAKLEPYT
EYKVWIKAKNDIGLSKSSNAIYVQTAQDVPSAAPKMFFSRFTKSLRIKWTRLSVNDANGI
ITKYVIWWKEKFRMTESFKMKIIRHINRPETTLLSLKPYTHYAMKIQAFTKVGPGPNSSV
VIQRTLEGVPSQSPKNVMIIGRTSTKLTVQWNKPPEKSINGILTGYRVYYFRKPKGPKSW
IDVLENETSVAIANLEIFSNYTIQVSALTSQGPGKQSSRLNARTDEDIPGPPTDLRATTT
SLQSIKLSWSQPNKPNGRITNYKIYFVNNVKNLERKHSYNIHYVEGTKIEHEFENLSENR
TYYFWVCAKTSKGEGNCTKKGIASTSRGPPSFINDDNGHIIVRWKHTAVLKCHFSGYPIP
TISWLDINGKPIVLSHKYHINKDNHLVVKNVDRRDSTRYYCKVKNKWGSINKSIILKVQA
PPDPPKSIRFSGVSMTSVKLTWINGFKWNADLTNIILNYKQKEIPNWVNISIHHNVTECI
VKNIKSARSYFFRMKAVNEIGEGNFSGIQRLRFKINGGVLEPVEEKDDPNKEETALSRST
IFKDSAVIGTLIGVSVFLILVVIILALLTKLGLNPMTKLQQRSVKIWRWFVTKGISKTDR
RGNLKRRSDGSSTDGHLGGSSSSLSQGPASYNSSTFSLPRTSSRITESGYATGGYPPIPF
GNFTPGPNGGPRASGSSDEGIGPETCGDIKSCSVTETRQTSSIPCRSGSNGTPAPTTLMM
NSREYIDPEEYDEEINTTENSQTSNLKVCCENTKIMENSSPTFTPKGKEKVYFQSWAPCV
SLNMLPVRPKYEDGHFIVGPDVDHILAYRPPRCYDSTSSEYSSSRDELAQAYEFGKLHHL
DDHYGRPTLESASSSGETTGGSEKDGICHFSSELSIGRPFLIPVAILPPPPNHRFRTRKT
QQLNTFYEKDETLV
NT seq
5265 nt
NT seq
+upstream
nt +downstream
nt
atgatttctataatatttttcatactgtttacaaatgcttttgtgtattcaagcaaatac
tcaacgcctctccgatttgtcgaagaaccatctgatttgctattttcaagtcaaaattca
ggatatcttcattgtgttgcgaaagcaacttcaaatgacaacaatgaccagcaaattacg
ataacctggcgtttcttaaatggttcagttgttcgaaacgtttccagtcttatcgttagt
ttgcccaatggttctctttggtttaaaccgtttcatgaatatgttgaagacatacataac
agcaaataccagtgtatagcaaatcttacattacataaccaagcaatactgagcaaacct
gcttcagttaaagctgttgttctgacacagttcgacgtcatgttaagagatcaatatgtg
caaagaagtggattttcggtctcatttcgttgtatttatccagacaaagtgaaatcatat
gttaaggttgccaaatggtttgttaacaaagaacctctaaaagttgcaccaaaggataac
cttgttgtaaaggatgtacagaaaagcgactctgacaaactttatttttgtgttgttgtt
aacattctcaccgatgaaatggtagctagcaatgtagccaagattttcataagaaattct
gcagacatcgcaaaagtgcctttaaaattcaagcttgtacctgaaaatcgcaccgttgtc
gaaggagaacaaactgagtttgaatgtcttgtttccaaaacaaacgtgctgtatacttgg
aatcacaacaacataacattacgtgtcagtaatcgttaccgattgatcaatggtcgctta
aaaatattaaaagcttctttagcagatactggacagtatttttgcattgttcgagatcaa
acaacacaggaagaaatctcatcttctgctactctggttgttcgagttcccttaaaattt
gtcactaaccttacaaagatctgtacgacttaccacgtcaatgcaacattctcctgtgat
gttagcggttatccttctccccgaattatttggtataagaatgcaaaagagataaagaac
aataccaaaattatacgaaatgggactcgtttgatcattacatcaacctggggacgagat
aaaggaatttatcaatgtatagcaagtaatggttttgaaactattcatcaagcagcatca
ctcattgttggaactaaggctccaatcattgttgaagcgttcaagcagcaaaatctttcc
ttttcttccaaacttgacatctcttgtaaggcggtaggaaaggaacaacttagtttaata
tggtataaagatggaatgatcattgaaaaaactaatgatttgaggattaatcttaaacat
tatcatgacttatggacattgcaaattaaaaatttaacagcagctgatagtggtttatat
cgttgtgaagttctgaatcgcgctggctcaaaccatgttgaagcagcgattttggtaaaa
ggatcgattgaaacttatgaactgataattctggaagaaggtactagaaaaacttttgtt
tgtcatcaatgcataaaatggacattcaacaacgtgattgacaaaaccagaattagtgtg
aagaaagtcttggatatgtgtattttaaaccttgactatatcattaaaaacgatgcaggg
aaatacacttgttataaaaaagtcgatgatgaagttagcaaagaagtgacagaaatattt
gtaataaccattccccgtttcacaagagaccacagtcctaattttacgagcgttgttgaa
aataatgacattacattgcgctgcggtggtagtggctttcctcgtccgaggacaacttgg
cgacgtcagattggaggaaattttgaagaaattgtagaatcgtctcgttttcaattgatc
gatgatggttctcttaaaataagtaacgtgacgttacaagacgagagagattattcatgt
gaaatatcaaactctcatcgttcaagagctgatttaaccatcacgttgaatgtcaacatt
cctgcaaagataattaattggaggtacaccgagtttgcaattgctgggaataaaacgaat
ttatattgcgaaggaataggagaaaaacgcttagaaattacttggtttaaaaatcagcaa
aagttatttgaaagtacgaatttaatgatcagtagagtgggagaaatttctgttttaact
cttttacgtgttgctcgcaaagacgcaggaaaatatatttgtaaaattttcaactcgttt
ggaaaagatgaaaaatctttggaattaagaatacgtgataaacctaatccaccaatactt
gataagtataaaaatgaaaaaagaagtgttaccatttattggacaccaccattcgatggc
gaaagtcctataaccggttatacaattgtttacgagggaacaacttatccttttataaga
aaatatattgctattgctgcgactaattcgtgtaaaattgctaaacttgaaccgtatacg
gaatacaaagtgtggatcaaagctaagaatgacataggattgagtaaatcttcaaatgca
atttatgttcaaactgctcaagatgttccatctgcagctccaaagatgttcttttctcgt
tttacaaaaagtttgaggataaaatggacgagactcagcgtgaatgatgctaatggcatt
atcacgaagtatgttatttggtggaaagaaaagtttagaatgaccgagtcatttaaaatg
aaaatcattcgacatataaatagacctgaaactacattactttcactcaaaccttataca
cactatgcaatgaagattcaggcattcactaaagtaggtcctggaccaaactcaagcgtt
gttattcaacgtactctagaaggagttccttcacaatcaccaaaaaatgttatgattatt
gggagaacatcgacaaaattaacagtacaatggaataaaccaccagaaaaaagcataaat
ggcattctcactggttaccgtgtttattactttcgtaaaccaaaaggaccgaagagctgg
attgatgtgttagaaaatgaaacaagcgtagcaattgcgaatcttgaaatatttagcaat
tacaccatccaagtgtctgcattaacttcgcaaggtcctggtaaacaaagttctcgactc
aatgctcgtacagatgaagacattccaggccctccaacagatcttcgtgcaaccacaaca
tcattacagagtattaaattaagttggtcacaacccaataaaccaaacgggcgaattaca
aattacaaaatatactttgtaaacaacgttaaaaacttggaaaggaaacattcatacaat
attcattatgttgagggcacaaaaatagagcacgaattcgagaatttatctgagaatcga
acgtattatttttgggtgtgtgcgaaaacgagtaaaggtgaaggaaattgtacaaagaaa
gggattgctagcactagcagaggtcctccatcgtttattaatgacgacaatggacatata
attgtgcgttggaaacatacagctgtcttgaaatgtcacttctcgggttatcctataccc
actatatcttggctcgatataaatggaaaacccattgtcctttctcacaaatatcacatt
aataaagataatcatttagttgtgaaaaatgttgatcgaagagattctacccgttattat
tgtaaagtgaagaacaagtggggatcaataaataaaagtatcattttgaaagtacaagcg
cctcctgatccaccaaagtccattagattttctggagtgagcatgacatctgtaaaatta
acttggatcaacggtttcaaatggaatgcagatttaacgaacatcatactcaattataaa
caaaaagaaatccccaactgggttaacatttctattcatcacaatgtcactgagtgtatt
gtaaagaatataaaatctgcgagatcatacttttttcgaatgaaggcagttaatgaaatt
ggagaaggaaatttcagtggaatacaaagactaagatttaaaataaatggtggagtttta
gaacccgttgaagagaaagatgatccaaacaaagaagaaactgcactttctcgatcaact
attttcaaagattctgcggttattggaaccttaattggagtcagcgtttttctcattctt
gttgttatcattttggctttgcttacaaaactaggtctcaatcctatgacaaaattgcaa
caaaggtcagtaaaaatttggagatggtttgtcactaaaggaatctcaaaaactgatcga
cgaggaaatttaaaacggagatcagatggttcgtcaactgatggtcatcttggtggctca
tcttcatcgttaagtcaaggtccagcttcctataatagttctacattcagtttaccacga
acatcaagccgtattactgagtcaggttatgctactggcggttatcctccaattccattt
ggtaactttaccccaggtccaaatggtggacctcgtgctagtggttcttcagatgaagga
attggcccggagacatgtggtgatatcaaatcatgtagtgtaacagaaactcgtcagact
tcatcaatcccttgtagatccggctccaatggtactccagcgccaactacattgatgatg
aattcaagagaatatattgatccagaagaatatgatgaagaaataaatacaacggaaaac
agccaaacatctaatttgaaagtctgttgtgaaaacacaaagattatggaaaattcgtct
ccaactttcactcccaaaggcaaggaaaaggtttattttcaatcttgggcaccttgcgtt
tccttgaacatgttgcccgttcggccaaaatatgaagatgggcattttattgttggtccg
gatgttgatcatatcttagcatacaggcctccccgatgttatgattctacatcttctgaa
tacagttcatcaagagatgaattagctcaagcttatgaatttggcaaattgcatcatctg
gacgatcattatggcagaccaactttggagtcagcttcaagctctggtgagactactggt
ggtagtgaaaaagatggcatctgtcatttctcttctgaattatccatcggtcgaccattt
ttgattcctgtagctatattacctccgcctcctaaccaccgctttagaacgagaaaaacg
cagcaattaaacactttttatgaaaaagatgaaactcttgtgtag
DBGET
integrated database retrieval system
