Xenia sp. Carnegie-2017 (soft corals): 124445628
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Entry
124445628 CDS
T08024
Name
(RefSeq) N-glycosylase/DNA lyase-like isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124445628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xen03400
]
124445628
Enzymes [BR:
xen01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
124445628
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124445628
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH_5
HHH
Motif
Other DBs
NCBI-GeneID:
124445628
NCBI-ProteinID:
XP_046852327
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MAAKLISTDWKRLPCEIDLLNLGITLACGQAFRWKKINDDEWRGVLSGKVWTFKQSSDGI
FYKFTCKLKEIPNPAHEAILHEYFHLNIDVRHLYKRWSSRDINFKRVASSISGFRLLRQD
PVENLFSFICSSNNNIERISSMVEAMCVKYGDVIAEVNDVVYHKFPSIDTLAKAEVEQEL
REMKFGYRAKYIHETAKALLKKSNKNWLQSLRDVPYEEAHAALCELPGVGAKVADCVCLM
SLDKTNAIPVDTHVWQISCRDYQIPELKGAKTLTKSIYKAIGDYFRQLYGEHAGWANSVL
FSGDLKKFKDSHSKSSPAKSMKNSKELKRKSGTERVSVYSKVKKECNS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaaacttatatctacagattggaaaagattgccatgtgagatagatcttttg
aacttaggaatcactcttgcttgtggtcaagcatttagatggaaaaaaataaacgatgat
gaatggcgaggagtgttgtctggcaaggtttggacttttaagcaaagttccgatggcata
ttttacaagtttacctgcaaattaaaagagattccaaatcccgctcacgaagccattctt
cacgagtactttcatttgaatatcgacgttcgtcatctctataaacgctggagcagtaga
gacattaacttcaaacgagtggcatcctcgatttcaggctttagactacttcgacaagat
ccagtggaaaatttattcagcttcatatgttcatccaacaacaatattgagcgtattagt
tctatggttgaggcaatgtgtgtaaaatatggcgatgttatagctgaagttaatgatgta
gtttatcataaatttccatcaattgatactttagccaaagcagaagttgaacaagagttg
agagaaatgaagtttgggtacagagcaaaatatattcacgaaacagcaaaggcccttctg
aaaaaatcgaataaaaattggttgcaatcgctaagagatgttccttatgaagaggcccat
gcagcattatgtgaattgcctggtgtgggagcaaaggttgctgattgtgtttgtctcatg
tcattggataaaactaatgcaattcctgttgatactcatgtctggcaaatatcttgccga
gattatcaaatccctgaattaaagggagcaaaaactcttacaaaaagtatttataaggca
attggagattactttcgtcaattgtatggagagcatgctggctgggcaaattcggttttg
tttagtggcgaccttaagaaattcaaagattctcattcaaagagttcacctgcaaaaagt
atgaaaaatagtaaggaattaaaaagaaaatctgggactgagagagtttctgtttactct
aaagtcaaaaaggaatgcaatagttga
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