KEGG   Xenia sp. Carnegie-2017 (soft corals): 124445709
Entry
124445709         CDS       T08024                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
xen  Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03030  DNA replication
xen03410  Base excision repair
xen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:xen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124445709
   03410 Base excision repair
    124445709
   03420 Nucleotide excision repair
    124445709
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:xen03032]
    124445709
   03400 DNA repair and recombination proteins [BR:xen03400]
    124445709
Enzymes [BR:xen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124445709
DNA replication proteins [BR:xen03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    124445709
DNA repair and recombination proteins [BR:xen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      124445709
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 NAPRTase_C
Other DBs
NCBI-GeneID: 124445709
NCBI-ProteinID: XP_046852411
LinkDB
Position
Unknown
AA seq 2265 aa
MPNFRKRFLKRGDREVSNVTGYRHSKQDDSNSVETRLLRLQSNDFLDSKYGFDRYKEPVD
RLGWLINMHPVEILDDNNKLISAVDLYFIQDDGEKFRVPYPFKPYFYILAKKDTDREVAT
FLNKKFTGLISTIETVPKEDLELPNHLVGLRRSYIKLSFMNVNDLIKVKRAIMSAVRKNK
ERISSTATYNLLLSNVDDEDIRSVNRAIDQMENIIDIREYDVPYHVRVAIDLRIHVGHWY
VIKVRGGLYPEMERQDDLLDRPDPVVLAFDIETTKLPLKFPDSSVDSIMMISYMIDGQGY
LITNXEIISEDIEDFEYSPKPDYEGLITVLNEPDEISLLHRFFEHIQDVKPTIFVTYNGD
YFDWPFIEARALHHGLNMADEIGFAPDSQKEYKSRAAIHMDCFRWVQRDSYLPVGSQNLK
AVTKAKLRYNPIELDPEDMCRMASEQPQEMANYSVSDAVATYYLYMKYVHPFIFALCTII
PMEPDEVLRKGSGTLCEALLMVQAFHANVIFPNKQEQVYNKLTKDGHLLDSETYVGGHVE
ALESGVFRSDIPCRFRMVSSACQQLMDDVESTMRHAIVEEEGIPMETVTNFEEVCEEIKE
KLASLRDTPNRLENPMIYHLDVGAMYPNIILTNRLQPSAIVDETTCARCDFNKSGSKCQR
PMKWMWRGEYLPASRNEYQTIKQQLEVEKIPGLEPGDPPRTFHSLPIAERAQMEKKRLSE
YCHKAYKKTKVTRLAEIETTICQRENSFYVDTVRAFRDRRYEFKGQLKIWKKKLASAMEK
GDAQDIKSCKSKEVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCCTGADIITR
AREIVEQIGRPLELDTDGIWCILPASFPENFLVKSTHPKKSKVTISFPGAMLNIMVKNYF
TNDQYQELVDKDDIRYTIRSENSIFFEVDGPYKAMILPAAKEEGKKLKKRYAVFNEDGSL
AELKGFEVKRRGELQLIKNFQSSVFEAFLQGSSLEEVYHAVGKVANYWLDVLYSQASNMP
DSELCDLISENRSMSRTLEEYGSQKSTSISTAKRLAEFLGDQMVKDKGLSCKFIIARKPE
GSPVTERAIPLAIFQTEDGVKRHYLRRWLKCPGLANYDIRNILDWDYYVERLNSAIQKII
TIPAALQGVSNPVPRCRHPDWLHKRLLEKNDVFKQQRITQMFSVVAKPAVEENSVSNSNE
YSEGVEDIEDITKSKSSSLSFRPLVTKRKSSSLDASNMSHVDLSKPWMEVLGPAPPFGST
KEERAVWVAFQKQKWDYQRKQRMEKKRLKSQALNLGYDVKNLRSKRSTGLSTFLQRKTKT
ILDEHWQLIQVAETETPGLFKLWALIGSXLHAIKLNIPRVFXVNCIKAKDGTSSAWRRVS
RTLPRSQPLVXLYEYSVAETLYREHASELSTDLSSPDIEGIYESQVPLLFRAIVSLGCVC
SVNKIFSRLFSGMDIDNFNLDQLDFKTNADHKYLVEGSVKHIYIYHCQGRNRAVYGIFIN
PTQKVFIFIVDTVRHNRMPNLDSLYQVERNARIKRSAEEGEEKPALTPANLQFEVRVDTD
SKHALRAIQRTLSTYKEEKKGPTMILLQSSWGKDSLQSNLPILNEFPVVTIPTNENEAPF
NVLDWQRHIAKRIIQHYLYSDTWLQAQLEHARFCHIPLGNITADAAAFACDVFYARNLEK
NNHVLWLSPGDRPDLGGKEDDENRPGTQFNEDSTVELNCSGAYPTVCIELSLDGLAVNAV
LQSSHINDYEGGASSVISFENVAQVSLEEMVSNAGGVSASLTAYDESALCASAFRVLKSL
IHSWLHEVSSYQNPYADLQLVHFYRWLQSPSSLLHDPALFRLVQGMMKKLFLQLVAEFKR
LGATVVFXNFNKIIICTKKRSVTDAFSYISFILKSIQSKDLFNSLDISLTGCWEYLLWMD
QANYGGIRGKMPDDENEDENSDTDVEETGNEGKRGEPQVEMNWNICKYLPTSASCQNFFQ
IAIAGHIHAIYKHLLAEKELIQPGSTPIRKRGGSSQSQKMSDSSTTPSLVSFTQHRIEGS
LAQQLFTITQKIQQILSGNTHARRDPSAEFPLLPGSHLSLNNPALEFVKYVCKALSLDSN
TQNQVNKLRRDLLKLIGVGEFSIEASFIDPCLSFVLPEVICGYCNGCRDINLCRDCNIVM
PEGNNRIALQCPYCRSEYDMLEIEQKLIKHAQEKSMAFVLQDVSCSKCNGVKETHMASYC
RCAGDYVNMIQREAFHEKMKTFENIARYYNFDLLLEIVEWILKMN
NT seq 6798 nt   +upstreamnt  +downstreamnt
atgccaaattttagaaaaaggtttcttaaaagaggtgatagagaggtttccaatgtgact
ggttaccgtcatagcaagcaagatgattcaaattcagttgaaactcgcttgcttcgactc
cagtcaaatgattttctggattcaaaatacggatttgatcgctacaaagagccagttgat
cgtttaggctggcttattaacatgcatcctgttgagatattggacgataacaataaactg
ataagtgctgttgatttgtattttattcaggatgacggggagaaattcagggttccttac
ccattcaagccatatttctacattttggcaaaaaaggataccgatcgcgaggttgctacg
tttctaaacaagaaattcacaggacttatatccaccatcgaaacagttcctaaagaggat
ttagaattgccaaatcatcttgttggacttagaaggagctacataaaattgtcttttatg
aacgtcaatgatcttattaaagtcaagagagctataatgtccgccgttcgtaagaataag
gaacgtatcagttcaaccgccacctacaacttactactttcaaatgtggatgacgaagac
attcggtctgtgaatcgagctatagatcagatggaaaacattattgacatcagggagtac
gatgtaccgtatcatgttcgcgttgcgatcgacttaaggattcacgtgggccattggtat
gtaatcaaagtacgtgggggcttgtatcctgaaatggaacgtcaagacgaccttcttgac
agaccggatcctgttgtgctagcattcgatattgaaaccaccaaacttcccctgaagttt
cccgactcaagtgtggacagcatcatgatgatatcgtacatgatagatggacagggttat
ttgatcactaatnncgaaatcatttcggaagacatcgaagactttgaatattcaccaaaa
ccggactacgaagggctaatcactgttctcaacgagccagatgaaataagtctactacat
cgtttttttgagcatatacaagatgtgaagcctactatattcgttacttataacggagac
tactttgattggccatttattgaagctcgagctttgcatcatggtcttaatatggcagat
gaaataggtttcgctcccgattctcaaaaggagtacaaatctcgtgcagctattcacatg
gactgcttcagatgggtccaacgggacagttatttgccagtcggcagtcagaatttgaaa
gctgtaacgaaggcaaaattaaggtacaacccaattgaactggatcctgaagatatgtgt
cgaatggccagtgagcagccacaggaaatggcaaattattcagtttctgacgccgttgcg
acttattatctttatatgaaatatgttcatcctttcatctttgctctctgcactattatt
cccatggaacccgatgaagtattacgcaagggctccggtacgctgtgcgaggcactgttg
atggttcaggccttccatgcaaacgttattttccccaacaagcaagagcaagtttataac
aaacttacaaaggatggtcaccttcttgactctgaaacgtacgtcggtggtcacgtcgaa
gctctggagtccggcgtctttcgtagcgatattccatgccgatttcgtatggtatcatcc
gcttgtcaacaacttatggacgatgtggaaagcacaatgcgacatgctatcgtcgaagaa
gagggaattcccatggaaacggttacaaatttcgaagaggtatgcgaagaaatcaaagag
aaacttgcttctttacgggatacgccgaacaggcttgaaaatccaatgatttatcatctt
gacgttggtgctatgtaccctaatatcattttgacgaaccgtttacagccgtccgccatt
gtggatgagaccacgtgtgctagatgcgacttcaacaaatctggtagcaaatgccaacgt
ccaatgaagtggatgtggagaggagaatatttacctgcaagtcgaaacgaataccaaaca
ataaaacagcagctcgaggttgaaaagattcctgggctggaaccgggtgatccaccgcga
acatttcattcgctgcccattgctgaacgagcacaaatggaaaagaaacgtctttcagaa
tattgtcataaagcgtataaaaaaaccaaagtgacccgactcgcggagatagaaaccacg
atttgtcaaagagaaaattccttctacgtcgacaccgttcgcgcctttcgtgacagaaga
tacgaatttaaaggacaactaaagatatggaaaaagaagctagcttcggcgatggaaaaa
ggcgatgcccaggacataaaaagttgcaaaagtaaagaagtcttgtacgattcgttgcaa
ctcgcgcataagtgcattttaaattccttctatggttacgtcatgaggaaaggtgctcgt
tggtattcaatggaaatggccgggattgtctgttgtactggcgccgacatcataacaaga
gctagagagattgttgagcaaattggacgtcctttagagcttgacactgatggaatttgg
tgtattcttcccgcaagttttcctgaaaattttttggtgaaaagtacacatccgaagaaa
agtaaagtgacgatttcatttcctggtgcgatgttgaacatcatggtcaagaattatttc
accaatgatcaataccaggaactcgttgataaagacgacatacggtatactatcagaagt
gaaaattcgatcttttttgaggttgacggcccttacaaagctatgatattgcctgcagca
aaagaagaaggcaagaaactgaaaaagaggtacgccgtcttcaacgaagatggttcatta
gccgagttgaaaggtttcgaagtgaaacgtcgtggtgaactgcagctcattaagaacttt
cagtcgtctgtattcgaagcgttcttgcaaggatcgtccctcgaggaagtttatcatgca
gttggcaaagttgcgaactattggcttgacgttctttattcgcaggcctcaaatatgcca
gatagcgaactctgtgatcttattagcgaaaacagaagcatgtcccgcacgcttgaagag
tatgggtcgcagaaatcgacatccatcagcacggccaagagattggcagaatttcttggc
gatcaaatggtgaaggataaaggcttgagctgcaagtttatcatcgcaaggaaaccagaa
ggttcgcccgttactgaacgtgccatacctttggccattttccaaaccgaggatggtgtc
aagaggcactatcttcgtaggtggttaaaatgtccggggttggctaactacgatattcgg
aatattttggactgggactattatgtcgaaagattgaacagcgctattcaaaagattatc
accattcctgctgcattacaaggcgtatccaatcctgtgccacgatgtcgccatcccgat
tggttgcacaaacgtctgttggaaaaaaatgatgttttcaagcaacaaagaatcacgcaa
atgttttctgtcgttgctaaacctgctgtcgaagagaatagtgtttcaaatagtaatgaa
tattcggagggcgttgaagacatcgaagatatcacaaaatcgaaaagttcttcgctttca
tttcgtcctctggtcacaaagagaaaaagctcttctctcgatgcctcgaacatgtcccac
gttgacctctccaaaccatggatggaagttcttggccccgctcctccctttggctcgacc
aaggaggagcgagccgtttgggtagcatttcaaaaacaaaaatgggattatcaacgaaag
cagaggatggaaaagaaacgtttgaaatcgcaagctcttaacttgggttacgacgtcaaa
aatttgcgatcaaaaaggtccactggcttgtcaacattccttcagagaaagacgaagaca
atattagatgaacattggcagttgatacaagttgctgaaacagaaacgcctggattgttc
aaactttgggcgttgattggttcgngtcttcatgctatcaaattgaacattccaagagta
tttntcgtgaattgcataaaggctaaggacggaacgagctccgcgtggcgtcgtgttagc
cgaacattacctcgttctcaacccttggttnatctgtatgaatattcagttgctgagacg
ttgtacagagagcatgcaagtgaactttctactgatttatcatctccagacattgaagga
atatatgagtctcaggttccactcttatttcgagccatcgtttcgttgggttgcgtgtgt
tctgttaataagatattttcccgattgttttctggaatggatatcgataattttaacttg
gatcaactggactttaaaacgaacgctgaccacaagtacctcgtcgaaggaagcgtgaaa
cacatatatatttatcattgtcaagggcgcaatagagctgtgtacggaatattcatcaat
ccgacacaaaaggtcttcatctttatcgttgacacagttcggcataaccgcatgccaaat
cttgactctttgtatcaagtcgaaaggaacgcaagaatcaaaaggtcagctgaagaaggt
gaagagaaacccgcactcacacccgccaatttgcaattcgaagttcgtgttgacacggac
agtaagcatgcacttcgggctattcaacgtactttatcaacttataaagaggaaaagaaa
ggacctaccatgattcttcttcagtcatcgtggggtaaggatagccttcaatcaaatctt
ccaattttgaacgaatttcctgttgttaccattcctactaacgagaacgaggcaccattc
aatgttttggactggcaacgtcatattgccaagagaattatacaacattatctttacagc
gatacttggctacaggcccagttggaacatgcgcgcttctgccatataccgcttggcaat
attaccgctgatgcagctgcgtttgcttgtgatgtgttttatgcgcgcaatcttgaaaag
aacaatcacgtattgtggctttcacccggtgacagacccgacttgggagggaaggaagat
gatgaaaatagacctggaacgcaattcaatgaagatagcacagtagaattaaactgctct
ggtgcttatcctactgtttgcattgagttatcgcttgatggtctcgcggtcaatgctgtt
ctgcagtcttcacacatcaatgactacgaaggtggagccagctccgtgattagttttgaa
aacgttgcccaggtttctttggaggaaatggtgagcaatgcaggtggtgtttctgcttct
ttgactgcatatgatgagtctgcactttgtgctagcgctttcagagttttgaaatcgtta
attcacagctggttacatgaagtatcttcctaccaaaatccatatgcagatcttcaactg
gtgcatttttacagatggcttcagagtccttcgtcgttattgcacgatccagcacttttt
cgtttggtgcaaggaatgatgaagaaactgttcttgcaacttgttgcagagttcaagaga
cttggcgcgactgtagtttttnccaactttaacaagatcatcatctgcacaaagaaacga
agtgtaaccgatgcgtttagttacatcagcttcattctaaaaagtatccagtcaaaggat
ctgttcaacagtctcgatatttcccttacgggctgctgggaatatttgttgtggatggat
caggccaattacggcggcatccggggtaaaatgcctgacgatgaaaatgaagatgagaat
agcgacacggatgtcgaagagacgggtaatgaaggaaaacgtggcgagcctcaagttgaa
atgaactggaacatttgcaagtacttgcctacatcggcttcttgccaaaatttttttcag
attgccatagctggacatatccacgctatatacaaacatctcttggcagaaaaagagctc
atacaacctggatcaactccgattagaaaacgtggcggatcatcccaatctcagaagatg
tcggattcgtcaaccactccaagtttggtttcctttactcaacatcgaatcgaaggcagt
ctagcacaacagcttttcaccattacccaaaaaatccaacagatattgtcaggcaatacg
catgctcgacgtgatcctagtgccgagttcccactcctacctggctcgcatctttctctc
aataaccccgcgttggagtttgtgaagtacgtttgtaaggccttgtctttagattcaaat
acacaaaaccaagtaaataaacttcgacgtgatttattgaagttaattggagttggtgaa
ttttccatcgaggcatcgttcatcgatccttgtttatcgttcgttcttcctgaggtgatt
tgtggctattgcaatggatgtcgggacataaatctttgtcgtgactgcaatatcgtgatg
cccgagggaaacaaccgcattgcattacagtgtccatactgtcgtagtgagtacgacatg
ttggaaatcgagcaaaagttgattaaacacgctcaagaaaagtcgatggcgtttgtttta
caagacgtttcttgctcaaaatgcaatggcgtgaaagaaactcacatggcttcgtattgt
cgctgtgccggagactacgtaaacatgattcagagggaagcttttcacgagaaaatgaaa
actttcgaaaatattgcaaggtattacaatttcgacctgctcctagaaattgtcgaatgg
atacttaaaatgaactga

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