Xenia sp. Carnegie-2017 (soft corals): 124445721
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Entry
124445721 CDS
T08024
Name
(RefSeq) rho guanine nucleotide exchange factor 11-like isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124445721
Membrane trafficking [BR:
xen04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124445721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH_16
RhoGEF
RGS-like
PDZ
C1_1
PDZ_6
RGS
PDZ_2
SOS1_NGEF_PH
PH_13
PH
C1_2
SR_plectin_7
Motif
Other DBs
NCBI-GeneID:
124445721
NCBI-ProteinID:
XP_046852422
LinkDB
All DBs
Position
Unknown
AA seq
1485 aa
AA seq
DB search
MQAPSGIPGQNLIQRCVIVQRDQKGYGLTVTGDNPVYVQSVREDGAADVAGVRVGDKIVK
VNGTLVTNSNHKEVVDLIKSGSYVALTLLGKPPSVLPLSEIVTPLVSSPTSPTVSWDNIE
ERIKNIRRYLEQEQIFVNRIQSQFDEKPSQKLEKELAESKKRAKALEQELNALLTNRSSI
LPLSGETSPTDPVFGVDLPKRLKPEAKGVYDNVPDVQGRKVNNRHISMSGDFPKSHLNFN
KPAERSESFAGHRPLVRKPGYGPGSHRSRSLPGAGAHKADIVKAVTINGEESNEDESHSL
DMSDSGITAVNMPYHQQSIICPDDDDFPSEDEKCEDHGPFNDLNLLNHKPAHMAVFLHYL
ISNSDPTSLLFWLVTEGYDEGSSKDMRKWIYEIYSTFLADGAPLKFDDDSTSEGIKKIES
ALSSAKCSEETLRGLLKPLRLAAAKDISLMLSDFRAKRALGLGNLFGDHQLEDDHMDRNK
EITVVEQTLVHHLNNLLNEVDNLSNNFKPSAYIINQIFRSESLSWSIATFMRNVGITSKT
ASPNTNVLERCKTYVNKDSLSYVPSIVRGGRKDKERKKMIMGHNFHPVIYQNTTYCNLCH
QLIWGIGHQGYQCQACDYNVHKLRCIEAIDEACTGRKKDRIATRPELSRRSSANALKTND
SAPALHSPDPREADSLKVGKFVDGIPTSPSRLELDKERPNSSSFDQKSSNPVSRTTSMTT
SKKNEARVRPSGRSKTTEVFIPGITKNDKFLDRITEPPQIESDDEEDSDLEIPTEIPNLK
DVIDAKLYKTLNSKSRKRLEIINELVYTERTHVRTLKVLHKVFYKPWLKAKIEYETVGKL
LFPNLEELIKIHKSLVQAMLDKRGEDGYVNEIGDVLLNRFDDQPGEEAKEAFAKFCQGQN
NALELIKAKQKEKRKLDEFIQQCESNPLCRKLALQGIISSSYQRLTKYPLFLDSLLKATP
SSNSDHPRLVKAIKICKQILEYVNQAVKDYEDQQHLAELSKKIDKSPLEKSNHKAAEEFK
NLDLTKHKLLFDGPLTWRMSQSKYIDLHAILLEDLLVLLQKQDDKYVLKCQSMKSYQDNK
TTHSPVLKLSTVLTRNVATDKKAFFIVGTSDKGPQIYELVAATIEKRRQWFKVITEAIET
CKGKERGRRNAVVVTTDSLKDMDDVPEQEKEEFETKEKNDLGSEKKEGEKESIDSEEKEK
DSEESKEVSSKDNLTMNVPTQKVEEFKHQQSIEPPNSAIVADGSDTDTTESLKNNSPEDS
VRSSRSSVEVMELLKQKDDEIRKLLEEKSRLVEEFQGSHSIENLVSKGSVTDTNEDARSL
VVESILEANHITAAVTSILSPSERSQNNEENPLPPQQQLATSTAKLNECLTKLLNVISER
DINRERLQYDLQQYQGRAHKLEQQRSNSPRGLHLSHSDETFYPNYDGHGNWESLTDRLAL
PNNHNDIPRQLRTSSFSGCSESSRSSHGSINNSLALGDFTDQLEV
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctcctagtggaattccaggtcaaaatttgattcagagatgtgtgattgttcag
cgggatcaaaaagggtatggattaactgttactggtgacaatcctgtctatgttcagtct
gtgagagaagatggtgctgcagatgttgctggtgttcgtgttggagataagattgtgaaa
gttaatggaacgctggtgacaaattctaatcataaagaagttgtggacttgataaaatct
ggatcatatgttgctcttacattacttggaaaacctccttcagtgcttccactttcagaa
attgtaactccacttgtgtcatctccaacatcgccaactgtttcttgggataacatcgaa
gagagaattaagaacattcgtcgttatcttgagcaagaacagattttcgtcaatagaatt
cagtctcaattcgatgagaaacccagtcaaaaactcgaaaaagagcttgcagagtcaaag
aaacgagcgaaagctttagagcaagaacttaacgcgttattaacgaacagatcaagtatt
ttgccattatctggggagacttcaccgacagatccagtttttggtgttgatctaccaaag
cgattaaaacctgaagcaaagggtgtatatgataatgttccagatgtccagggtcgaaaa
gttaacaatcgtcatataagcatgagcggggattttccaaaatcacacctcaattttaat
aagccagccgaacgaagcgaaagttttgctggtcaccgtccattagttagaaaacctggc
tatggtcccggtagtcatcggtcgagatcccttcctggagctggtgctcacaaagcggat
atcgttaaagctgttacaattaatggagaagaaagcaacgaagatgaaagccatagtctt
gatatgagtgattcgggaatcactgctgtaaacatgccttatcaccaacaatcaatcata
tgccctgatgatgatgatttcccttcggaagatgagaagtgtgaagatcacggcccattc
aatgatctcaatttactcaatcataaaccagctcatatggctgtattccttcattatctg
atctcaaacagtgatccaacaagtttgttattctggcttgttacggaaggatatgatgag
gggtcctccaaagatatgagaaagtggatttatgaaatatattctacatttttagctgat
ggagcaccattgaaattcgatgacgactcgacatctgaaggaataaagaaaattgaatct
gctttatcgagcgcgaaatgcagcgaggaaacattaagaggtctattaaaacctctcagg
ttagctgctgcaaaagacatttcattaatgctgtcagattttcgtgctaaacgagctcta
ggcttgggaaatctttttggggatcatcaactagaggatgatcacatggatagaaataaa
gaaataacagttgtcgaacaaacattggtgcatcatttaaataatttgctaaatgaagta
gataacctatccaacaactttaaaccttctgcatatatcatcaatcaaatatttagaagc
gagtctttgtcctggtcaattgcaacgttcatgagaaatgttggtataacttctaagact
gcaagcccgaacacgaacgttttagaaagatgtaaaacgtacgttaataaagatagttta
tcgtatgtgccaagtattgtaagaggtggaagaaaagacaaagaaagaaaaaagatgata
atgggtcataattttcatccagtgatttatcaaaatacgacctattgtaatctatgtcat
cagttaatctgggggattggacaccagggatatcagtgtcaagcgtgtgattataatgtt
cacaagctacgctgtatagaagccattgatgaagcttgtactggacgaaagaaggacaga
attgctacgagacctgaattatcacggcggagcagtgcaaatgcattgaaaacaaatgat
tctgctcctgcacttcactcaccagatcctagagaagctgattcactaaaagtggggaaa
ttcgtggatggtatacctacaagtcctagtcgtctggagttggataaagaaaggccaaat
tcgtcgtcatttgatcaaaaaagttccaaccctgtatctcgtacgaccagcatgaccact
agtaagaaaaatgaagctcgtgtaagacctagtggccgatcgaaaacaacagaagttttc
attcctggtataacaaaaaatgacaaatttttagatcgtataacagaacctcctcaaatt
gagagtgatgatgaagaggattctgacttagaaatacccacagaaataccgaatttaaaa
gacgtgattgatgcgaagctttacaaaacattgaatagcaaaagccgaaaaagacttgaa
atcattaatgagcttgtgtacacggagagaacccacgttagaactctgaaagtcttgcac
aaagttttttacaaaccttggttaaaagctaagatcgaatatgaaactgtgggaaaactt
ctttttcccaatcttgaagaattaattaagatacacaagtcccttgtacaggcgatgtta
gataaacggggagaagatggctatgttaatgagattggtgatgtcttattaaataggttt
gatgaccagcctggagaggaagcaaaagaagcgtttgctaaattttgtcaaggacagaat
aacgcactggaacttataaaggccaaacaaaaggaaaaaagaaaactggatgaatttatt
cagcaatgcgaaagtaatcctttgtgtcgaaaacttgcccttcaaggaattatttcaagc
agttatcaacgtcttactaaatatccactgttcttggatagtcttctcaaggcaactcca
agcagcaattctgatcaccctcgactggtaaaagccattaagatttgcaagcaaattcta
gaatatgtcaatcaagcggtaaaagattacgaagatcagcagcatttggccgaattaagt
aaaaaaattgacaagtcacctctggaaaaatcaaaccataaagcagcggaagagttcaag
aatttagatctgacaaagcataaattattatttgatggacctttaacttggagaatgagt
caaagcaaatatattgatttacatgctatcctgcttgaagatcttctcgtattgttgcaa
aaacaggatgacaaatatgttttgaaatgtcagagtatgaaaagttatcaagacaataaa
actacacatagtcctgttttaaagctttccactgtgttgacaagaaatgttgcaacagat
aagaaagcgtttttcattgttggtacgtcggacaaaggtccacagatttacgaattagtt
gcagcaaccatagaaaagagaagacaatggttcaaagttattactgaagcaattgaaaca
tgcaaaggcaaagaacgaggacggcgaaatgcagttgtcgtaactacagattcattaaaa
gatatggatgatgttccggagcaagagaaagaagaattcgagacaaaagagaaaaatgac
ttgggtagcgaaaagaaagaaggagagaaagaaagcattgactcagaggaaaaggagaaa
gattcagaagaatcgaaagaagtttcatcaaaggataacctgactatgaatgtccccact
caaaaagttgaagaatttaaacatcaacagagtattgagccaccaaattcagcaatagtt
gcagatggatctgatacagacactactgaaagtctgaaaaataattcacctgaagatagt
gtgcgatcatcacgatcctctgtggaagtaatggagttgttgaagcaaaaagatgacgaa
attagaaagttactggaggaaaaatcacgtttggttgaagagtttcagggatcacattct
attgaaaatttagtatctaagggatcggtaacagatacgaatgaagatgcgagaagtctt
gttgttgaatcaatactagaagccaaccatataactgccgctgttactagcattttaagc
ccaagcgaaagatcacaaaataacgaagaaaatcctttacctcctcagcaacaattggca
acatcgactgccaaactgaatgaatgtctcacgaaattattaaacgtcattagtgagaga
gacatcaaccgcgaaaggctccaatacgacttacagcaatatcagggaagggcacataaa
ctcgagcaacaacgatcaaattctccaagaggtttacatctgtcacattctgacgaaaca
ttttatccaaactatgatggacatggaaactgggaatccttaactgacagattagcgttg
cccaataaccataatgatataccaagacagttaagaacttcctcattcagtggatgtagt
gaaagcagtagaagtagtcatggaagtataaacaactccttggctcttggagattttact
gatcaactagaagtatga
DBGET
integrated database retrieval system
