Xenia sp. Carnegie-2017 (soft corals): 124446035
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Entry
124446035 CDS
T08024
Name
(RefSeq) uncharacterized protein LOC124446035
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124446035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124446035
03400 DNA repair and recombination proteins [BR:
xen03400
]
124446035
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
124446035
DNA repair and recombination proteins [BR:
xen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124446035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
124446035
NCBI-ProteinID:
XP_046852784
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MIWMKHGFHRVVFCVRKDINDAEEKDKEDVDILISELSCMVGNPLFSDVEIIAKNKNKIL
AHSFMLCARCKTLANFLQSSQSYCKDESANGLVRVELLDIDVRAVRAVLTYIYTACFVPV
LDETLADVKELVLRWNLNINPEKWKVIKDECEKNSEKDVDQCNVGSLDVLLKSLWEGEED
MNGNEETNDKIIAESFLDEELAGMTIKIYSQCSLEQVESCEKKNDKSSPGENLRENSLHQ
KSEKNDKAIFSTKTSSKGSPLLEKEKTSNMSEEYIVVNEDAVKNRTENFNVVDKGSVSIS
NQSLSTFVEINDVEDGSVSIYSQSPSSFVDMISSPEFSPLPENINDFELDDETDVLNTAI
SAQDTSESDMNVVDVKFTTDIVDDLVSSTPKKMETVVVPAEDQQIASTPDEREDDIYLLS
PTCSKKCSRVTGRNKMKQNDSLSNVFDISLDSDDIQMSDMKDTLKNKNIYDVSGLFSNSR
PTSPSLYSEKDEDIIEINNVESNFNSDNDKSKSGALSINTKNGKSSAVTDNRAKEISCCH
KLRLLSHNMEESHSYLNDSMGESAGIRDCVETINNDDQSIDCYDDGGFNCDLNEFVMHET
NISPREQWKDLKTSAQSSVNLGAMSTDEDVNIYHEEKTTPQSSFNLGAMSTDEDVNINHG
EKTPLQNSFILGAMSTDQDVNIDHGEKTPPQNSSILGAMSTDEDVNINHGEKTPSQNSFI
LEAESTDKEAVLKERKTLGASKNDFFVRHSSKVTGEDNLRTPCTPMLDYSNMATPDLKVE
LKQYGVRPLAKRKMVVKLKEIYNYTHKDKVAAESGCLIDRDNTPVSPEKDAFGSHDKQGE
VGAFSQPDSNNASDSLSNSDNVVSEQDEDSDESGRLSQQSSSNISKSLMSIFKKDDVLYK
KILMYLPISVCEVFETIKRNGIQCNLEQLKNYLDEQCITYTDPRTNRPQRRKKRGKRNPV
SIEV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgatctggatgaaacatggcttccatcgagtggttttttgtgttcgcaaagatattaac
gatgctgaggagaaggataaagaagatgtcgatattttgattagcgagttgtcttgtatg
gttgggaatccattgttcagtgatgttgaaatcattgcgaagaacaaaaacaagattttg
gcgcacagttttatgttgtgtgcaagatgtaaaacattggcaaactttcttcagtcaagc
caatcatattgtaaagatgaatcagctaatggcttagttcgtgttgaactactggatatc
gatgttcgtgctgttcgagctgtacttacttacatctatacggcttgttttgttcctgtt
ctcgacgagacgttagccgatgtgaaagaacttgtcctcagatggaatttgaatattaat
cctgaaaaatggaaagtaataaaagatgaatgtgagaaaaacagcgaaaaggacgtagat
caatgtaatgttggctctcttgatgtccttttgaaatctttatgggaaggtgaagaagac
atgaatggcaatgaagaaacgaatgataagataattgctgaaagtttcttggatgaagaa
cttgcaggaatgacgataaagatttattctcaatgttctttggaacaggtggaatcttgt
gaaaagaaaaacgacaaaagttcccctggagaaaacttgagagaaaactctttacatcaa
aagtcagagaagaacgataaggcaatttttagcacaaagacgagttcaaagggatctcca
cttcttgaaaaagagaaaacgagcaatatgtcggaagaatatattgttgtaaacgaggat
gccgtcaaaaacagaactgagaattttaatgttgtggataaaggctctgtctctatttct
aaccaatcactttcaacctttgtagaaattaatgatgtggaagatggctctgtctctatt
tatagccaatcaccttcatcctttgtagacatgatatcgtctccagagttttcacctctt
ccagagaatattaatgattttgaattagacgatgagactgacgtgttaaacactgcaatt
tcagctcaagatacttctgaaagcgacatgaatgttgttgatgttaaatttactacagat
attgtagatgatcttgtttccagtacacccaaaaaaatggaaactgttgtcgtacctgca
gaagaccaacaaatcgcgtcaacaccggatgagagggaagatgacatttatttactttct
ccgacgtgcagtaagaaatgttctcgcgtcactggcagaaacaaaatgaaacaaaatgac
agtttgtcgaatgtgttcgatatttctttggattcagatgatatccagatgtcggacatg
aaagacactttgaaaaataaaaacatttacgacgtgtctggtttgttctcaaattcaaga
cccacttcaccctctttatacagcgaaaaggacgaagatataattgaaataaataatgtt
gaaagtaattttaactcagataatgataaatcaaaatcaggtgcgttatccatcaacaca
aaaaatggaaaatcaagtgccgtgactgacaatcgagccaaagagatctcttgttgtcat
aaactacgtttattgtcacacaatatggaagaaagccatagctacttgaatgactcgatg
ggggaatccgctggaataagggattgtgttgagacaataaataatgatgatcaatctatt
gactgctatgatgatggtggatttaattgtgatttaaatgaatttgttatgcatgagaca
aatatttctcccagagaacaatggaaagacttgaaaacatctgctcaaagtagtgttaat
cttggagcaatgtcaactgacgaagatgtaaacatttaccatgaagagaagacaactcct
caaagtagttttaatcttggagcaatgtcgactgacgaagatgtaaacattaaccatgga
gagaagacacctcttcaaaatagttttattcttggagcaatgtcaactgaccaagatgta
aacattgaccatggtgagaagacacctcctcaaaatagttctattcttggagcaatgtca
actgacgaagatgtaaacattaaccatggagagaagacaccttctcaaaatagttttatt
cttgaagcggagtcgactgataaagaagccgttttaaaagaaaggaaaacattgggggca
tctaaaaatgatttctttgtaagacattcgagcaaagtgactggagaggataatttacgt
acaccatgcacgccaatgcttgattattccaacatggcaacacctgatttgaaggttgaa
ttaaagcaatatggagtcaggccactggcaaaacgcaaaatggtcgtaaaactaaaagaa
atatataattacacgcataaagataaagttgctgctgaatctgggtgtttaattgaccgg
gacaatacgcctgttagtccggagaaagatgcctttggaagccatgacaagcaaggggaa
gttggagctttttctcagccagatagtaacaatgcatcagacagcctcagcaacagcgat
aatgttgtgtcagaacaggatgaagattccgatgaatcgggaagactatctcagcaatcc
tcatccaacatatccaaatcattgatgtccattttcaaaaaggacgacgttttgtataaa
aaaattcttatgtacttgccaatttctgtgtgtgaagtatttgaaaccatcaaaagaaat
ggaatacagtgtaatttagagcaactaaagaattatctagatgaacagtgcataacgtat
acagatccacgaactaatcgtcctcagcgaagaaaaaaacgcggcaaaagaaatcctgta
tcaattgaagtttag
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