Xenia sp. Carnegie-2017 (soft corals): 124446071
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Entry
124446071 CDS
T08024
Name
(RefSeq) transcription factor Sox-3-A-like
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xen03000
]
124446071
Transcription factors [BR:
xen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124446071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Ccdc124
Motif
Other DBs
NCBI-GeneID:
124446071
NCBI-ProteinID:
XP_046852818
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MASGNLTTLDTIITSSYNRRSSPVTSMPDPGCLKCPLDAALDSVMAVNYDINGSQPVNVK
MLLNTDFIKQEPLDCTDLSRMVDCEVGSSQRSNEIVANTAGITGAINPLNISSAVLDSNK
NSSFSEAAEHEISGRISPNLELKKNTKMAPGSDRDPERVKRPMNAFMVWSREKRRIMAQE
NPKMHNSEISKRLGDKWKKLSPGDKQPYVEEAKRLRAQHMKDFPDYKYRPRRKTKNLLKK
DKYSLPLRGNCDTGPQVQRDFAQINEYFSYPNFTYTTHDVYNPVYNTNYNTMLSNSQYHV
ASTSTNSYYPNSACTIQNGQIYSYNPEHPHHTREGLSRMPNVNYTQETVMLSNGGAVQHI
KKENDSDNRRSYPGDLHEMINVYLTADSNLNYRSGTNHVEYFQHHNANQYNDDDSLNGSS
VIRRNPDTSTIPLTHVNF
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggcaatttaacaacgttggataccataatcacgtccagctataatagacgt
tcatcgcccgtgacaagcatgcccgatcctggctgtttaaaatgtcctttggacgcagcg
cttgactccgttatggctgttaactatgatataaacggatctcaaccggtcaacgtaaaa
atgttgctaaatactgactttatcaagcaagagcctttagattgtacagatttgagccgg
atggtcgattgtgaagtgggatcatctcaaagatcaaatgaaattgttgcgaatacggca
ggtatcacaggagcaataaatcccctgaacatttcaagtgctgttcttgatagtaataaa
aacagttcattcagtgaagcggctgagcatgaaatctctggtaggatttctccgaattta
gaacttaaaaaaaataccaaaatggcgcccggatccgatcgagatcccgaacgtgtaaaa
agaccaatgaatgcatttatggtatggtcgcgcgaaaaacgtcgaattatggcacaagaa
aatcctaagatgcataattcagaaatatctaagaggcttggggataagtggaaaaaatta
agtcctggtgacaaacaaccgtatgttgaggaagctaaacgattacgtgctcagcatatg
aaggattttcctgattataagtatcgtcctcgtcgtaaaactaaaaatttattgaagaaa
gataaatatagtttacctttacgaggaaattgcgatactggaccccaagtacaacgagat
tttgcacaaattaatgagtatttttcttatcccaattttacttatacgacgcatgatgta
tataatcccgtttataacaccaattataacacgatgttatcaaactcacaatatcacgtt
gcaagtacgtcgacaaattcttactatccaaattcagcctgcacaattcaaaatggtcag
atttacagttataatccagaacatccgcaccatacaagagaaggattatcaagaatgcca
aatgtaaactatacacaagaaacagtcatgctttcaaatggcggtgcagtgcaacacatc
aagaaagaaaacgacagtgataatagacgtagttatcctggcgatttgcatgaaatgata
aatgtttacttgacggccgactcgaatcttaactatcgaagtggaacaaatcatgttgaa
tattttcaacaccataacgcaaatcaatataacgatgacgatagtttaaatggaagtagc
gttattagacgtaatcctgacacaagtaccattcctttgactcatgtgaatttttga
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