Xenia sp. Carnegie-2017 (soft corals): 124446142
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Entry
124446142 CDS
T08024
Name
(RefSeq) guanine nucleotide exchange factor DBS-like isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124446142
Membrane trafficking [BR:
xen04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
124446142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
Spectrin
CRAL_TRIO_2
SH3_9
IQ_SEC7_PH
SH3_16
Motif
Other DBs
NCBI-GeneID:
124446142
NCBI-ProteinID:
XP_046852915
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MDGNDDLNSLRDKDDNNSRIWSELIIEGDADFSKDVAQLLKDKSVYISGGFDKNGSPLII
FPQSENKIDEANIEGIFHYLVQRFGPDEREKGFAALIDRRSEKWMSVQFVLDQLMRFFPA
TVVIKNAYVIKPQGFFQKFSRSRFRSDESYDFQVTILNDINALYEYVDKSQLTPCLGGSL
KYNHQEWVENRIAIDRFRDSCDDIASRLVTLKQIFDKTNLSSNYQEMEFMLNTHGQMWFD
VCDHINRTLKTGETLLKLMKGDEDSLERKVSSSLANSQNSIADLQLLVDKMSRVKNKFEE
VWQFHESWVAQTLQYNLFEKEFCEIRNMLMDAQKKLLRMKELGDSVTTAKELKIDTESLK
DEAKIVEEKLTDLCKSGDEMINKTNYHSKIIKLMCDELQDSNKDFQKKIEERIYNLDKSA
EVHEFLTQVRIWCDAGHNILASQHDLASKIVEDFFSKSQDFDMSRIQKTVKELGNKTLME
QAQMALKRISEVTEMIRNRLNKESSSKKMAAKIPVQSSAPVLSLNNPTHQTARSPPTSKI
NEGVSPLSNLKKENTKGQKSRSSKTQRCPISIVVASDLSTINNFQVGPEERPRSVFMDSP
RDVDVEDDAVLLTKRAQVMNELVETEKVYVRDLQDVVEGYMKQYKDSSPNIPQELKSKKG
IIFGNIHEIYVFHRNVFLLDLEKCANQPLLVGEVFLAKEKEFQMYATYCKNKPSSDALKN
ECAKVDFFVECQKSLGHLLPLHAYLLKPIQRITKYQLLLKQMIKYSQTRQASLKSLKNAL
KAMMKVLQNLNDVMHAMYIRGFLGSLGRQGKLLIQDSFYVWQSRKKFIAQAKGKPRQVFL
YEKVIIITKRDDEAPKDNVSYQFESSLELIAVGLTETVKKDPLKFGLSHNKSLFYTLQAP
SEDIKKHWVQEIRLLLQSQFSQVKKSKSLSMPLELNHKVDHSLSRVSNNNDEACNDVLTK
SIEGNDEYNNRDENDWSDDEDENAMNSKERYFGAPVIYRGIMDYTSTETTELSFLHGEIL
HVLRVGDGGWWYARSQKTSDEGWVPGSHLEKWDEYMQ
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atggatggaaacgacgatttaaatagcttgagagataaagatgataataatagtaggata
tggagtgaattaataatcgaaggagatgctgatttttctaaagatgttgcgcagctgtta
aaagataagtcagtttatatttcagggggatttgacaagaatggttctcctttgatcatt
ttcccgcaatcagagaataagatcgatgaggcgaatatcgaagggatttttcattatcta
gttcaaagatttggtcctgatgagagagaaaagggttttgctgctttaattgatcgtcgc
tcagagaagtggatgtctgtgcaatttgtccttgatcaacttatgcggtttttccctgcc
acagttgtcattaaaaatgcgtatgtcatcaagccgcaaggattttttcaaaagttttct
agaagtagatttcgatcagatgaatcatatgacttccaggtcaccattctgaatgacatc
aatgctttgtatgaatatgtggacaagagtcagctcacaccatgtctcggtggctcactt
aagtacaatcatcaagagtgggttgaaaacagaattgccattgataggttccgtgacagt
tgtgacgatatcgcctctcgtttggtaactttaaagcagatattcgataagacaaatttg
tcttctaactaccaagaaatggaattcatgttgaatactcatggccaaatgtggtttgat
gtttgtgaccacattaacaggacacttaagactggtgaaacgctgctaaaactcatgaag
ggcgacgaagattcacttgagcggaaagtgtcttcttccttggcaaactctcaaaacagt
attgccgatttgcagctgctagttgataaaatgtctcgagtaaagaataagttcgaggaa
gtgtggcagttccatgaaagttgggtcgctcaaactttgcagtacaacctttttgagaaa
gagttttgtgagataagaaatatgcttatggatgcacagaaaaaacttttgagaatgaaa
gagcttggtgattctgtcaccacggcaaaggaactgaagattgacacagaatctctcaag
gatgaagcaaagattgtggaagaaaaactaacggacttgtgcaagagtggtgatgaaatg
attaataaaaccaactaccattcgaaaattataaagctgatgtgtgacgaacttcaggat
tcaaacaaagattttcagaagaaaatcgaagagcgaatatataatttggataaatcagct
gaagttcacgaattcttaactcaggttcgtatatggtgcgatgccggacacaacattcta
gcttcacagcatgatctggcttcaaagatcgtcgaagatttttttagcaagtcacaagat
tttgatatgagtagaatacaaaagacagtaaaagaactgggtaacaaaacattgatggaa
caagctcaaatggctttaaagcgtatcagtgaagtaactgaaatgataaggaacagactt
aacaaagagtcaagttcaaagaaaatggcagcaaaaatacctgtacaaagtagtgcacct
gtactttctttaaacaacccaacacatcaaactgcaagatcacctccaacatcaaagata
aacgaaggcgtcagtcctttgtcaaatttaaagaaagaaaatactaaaggacaaaaatcc
agaagttccaaaacacaacgatgtcctatatcaatcgtagtagcatctgacttatcaact
atcaataactttcaagttggacctgaagaacgtccgcgttccgtcttcatggatagtcct
cgtgatgttgacgtggaggatgatgcagttttattgacaaaacgagcccaagtaatgaat
gaacttgttgaaacagagaaagtttatgtaagggatcttcaggacgtggtggaaggctac
atgaaacaatataaagacagtagtcccaacataccacaagagcttaagagtaaaaaagga
attatatttggaaacattcacgagatttatgtatttcaccgtaacgtttttttactcgat
cttgagaagtgtgccaatcagcctttgcttgtcggcgaagtgtttttggcgaaagaaaag
gagtttcaaatgtacgcaacgtattgtaagaacaaaccaagctcagatgcactcaaaaat
gagtgcgctaaggtggatttctttgtggaatgtcagaaaagtctaggtcatctgctacct
ttgcatgcttaccttttgaaacctatccagagaatcacaaaataccagttgctcttaaaa
cagatgataaagtactcacaaacgaggcaggcgagcttaaaaagtttaaaaaacgctttg
aaagcgatgatgaaagttttacaaaatttaaatgacgttatgcatgctatgtacattcgt
ggcttccttggaagtttaggccgtcaaggcaagcttctgatacaggatagtttttatgta
tggcagtctagaaagaaattcatcgctcaagctaaaggcaaacctcgacaggttttcctt
tacgagaaggtcatcatcattacgaagcgtgacgacgaagctccaaaggacaatgtatcg
tatcaattcgaaagcagcttggagttaatcgccgttggtttaactgaaacagttaaaaaa
gatcctctaaagtttgggctctcacacaacaaatcactattttacactttacaggcacca
tcagaagacataaaaaaacactgggtgcaagaaattcgactcttacttcaatcacagttc
tctcaagtcaaaaaatctaaatcgctatcgatgccgctggagttaaatcataaagtggac
cattcgttaagtagggtttccaataacaatgacgaagcgtgcaatgatgttttgacgaaa
agcatcgaggggaatgatgaatacaataaccgtgatgaaaacgattggtctgacgatgag
gatgaaaacgctatgaatagcaaagagcggtattttggagcacctgttatttatcgtggt
attatggactacacatccactgaaacaacagagctcagctttttgcatggtgagatttta
catgtcctaagagttggcgacggtggatggtggtacgcaagatcgcaaaagacgtctgac
gaaggctgggttccaggaagtcatttggaaaaatgggatgaatatatgcaatga
DBGET
integrated database retrieval system
