Xenia sp. Carnegie-2017 (soft corals): 124446393
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Entry
124446393 CDS
T08024
Name
(RefSeq) polycystic kidney disease 2-like 1 protein
KO
K04986
polycystin 2
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xen03037
]
124446393
04040 Ion channels [BR:
xen04040
]
124446393
Cilium and associated proteins [BR:
xen03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124446393
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124446393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_1
EF-hand_7
EF-hand_6
Fer4_24
Motif
Other DBs
NCBI-GeneID:
124446393
NCBI-ProteinID:
XP_046853191
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MNSEKLVNTKRRKHSGSQISLGIDHPIEMVSRPTSTYSRTAWEENDVTDDVDFSPRTAAT
TVDVSPTGMEAEPVAHQKQVPTDVRAGLQRRHVPVGFWTRLKRIVRSLWRTRQTEDVNSD
REMHVKTTLRELIIYIFFIVVLCILTFGMTSSTMYYFTKVMKDLFVETTMENRNTFKDIT
TMNEFFMYALGPLSNGLFWEKFYNNKSVKMSSNELGYIYFENKILGRPRLRQLRVKSDSC
VVHDDFKNVIKECYAPYSPGVEDKAPFGKMNGSAWTYKSEDALEGRSFWGQLATYKGGGF
VQLLNATEEESQIIIEELKENLWLNRGTRAVFIDFSVYNANINLFCIVRLLFEYPATGGC
IPSFTFRTLKLLRYVTGFDHFVMACEGIFALFLIYYTVEEIIEIKKHKFKYFKSFWNVLD
IVVLLLSYTAVAFHIYRTVVVGNLLKGLLDNPNQYANFDSISYWQTQFNNIVAIAVFFSW
IKVFKYISFNKTMTQLSSTLARCAKDVAGFAVMFFIIFFAYAQLGYLIFGTQVRDFSTFG
KSIFTLFRIILGDFDFHQIENANRILGPIFFITYVFFVFFVLLNMFLAIINDTYAEVKSD
IALQKSEFELGDYFKKGYHKVVDKLSVKKEKIADIQKALANADVNHDTRLDFDEWRSELK
SRGHADAEIEAVFAKYDVDGDRILDEKECKKMQEDLEGQQVELSDEIEEMERAKQEGRPG
TAVTRVSFRDSDVDSDDEGALRGRSDSPSLQHRNGGVSDGVSYDEFTVLSRRVDRMEHSI
GSIVSKIDAVLVKLEAMEKAKLKRRETMARLLDNITEGANTKSQEDLKRDQMERLVREEL
DHYGSNASLQSVETDSQSFASPSPIESRAPTAKSIYSHGAKSATSRGRKTVTESNASLRM
EMNEGIEAPVSEDSKV
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgaaaaactcgtgaatacaaaacgaaggaagcatagtggctctcaaatcagt
cttggcattgaccatcctatagagatggtgtcgagaccaacatcaacttattcgcgaacg
gcttgggaggaaaatgacgttacagatgatgtggatttttctccgcgaactgcagcaacg
acagttgatgtctccccaactggaatggaagcagagcctgtcgcacatcaaaagcaagtg
cctacagatgttcgtgctggactacaacgtcgtcatgtgcctgtaggattttggacacgg
cttaaaagaatcgtacgcagtctctggcgaacaagacagaccgaagatgtaaacagtgat
cgcgagatgcatgtaaaaaccactcttcgtgaactgatcatttacattttcttcattgta
gttttgtgcatattgacgttcggcatgaccagctcaacgatgtactacttcaccaaagta
atgaaagatcttttcgttgaaacaacaatggagaatcgaaataccttcaaggatatcacc
actatgaatgaattcttcatgtatgcactgggtcctctatcgaatggattattttgggaa
aaattttataacaacaagagtgtcaagatgtcgtcgaacgaactcggatacatttatttt
gaaaataagattttaggaagacccagactcagacagcttagagtaaagagcgattcctgt
gttgtacatgatgacttcaaaaatgtcattaaggaatgttatgcaccatattcccctgga
gttgaagataaagcaccatttggcaagatgaatggttcggcttggacatacaaatccgaa
gatgctctcgaaggtcgaagtttctggggtcagttggcgacatacaaaggaggtggattt
gtccaactacttaatgcgacagaagaggaaagtcaaatcatcattgaagaactcaaagaa
aacctatggttaaatcgcggaacccgcgccgtattcatcgatttctccgtttacaatgca
aatatcaatctattctgtattgtgagattgttatttgaataccctgcaacaggaggatgt
attccgagcttcacattcaggacgttgaaactgcttcgttacgtaactggttttgatcat
tttgtaatggcgtgtgaaggcatctttgctctattccttatttactatactgttgaagag
attatcgaaatcaagaaacataaatttaaatacttcaaaagtttctggaatgttcttgat
attgttgtgcttttgctcagctacactgccgtggcatttcacatttaccgaactgttgtt
gttggaaatctccttaaaggactgttggacaatccaaatcagtatgcaaactttgacagc
attagctactggcaaacacagttcaacaacattgttgctattgctgttttcttctcttgg
atcaaggtgtttaaatacataagcttcaacaaaacaatgacacagctttcatcaactttg
gccaggtgcgccaaagatgtcgctggttttgctgttatgttcttcatcatattttttgcg
tatgctcaattgggatacttgattttcggaacgcaagtgcgcgacttcagcacatttggc
aaaagcatatttactctgttccgtatcattctcggcgacttcgattttcatcaaattgag
aacgctaatcgcatcctcggaccaatttttttcatcacctacgtcttcttcgttttcttt
gtccttcttaacatgttccttgccatcatcaatgatacttacgctgaagtgaagtcggat
attgccctacaaaagagtgaatttgaactgggtgattacttcaaaaagggttatcacaaa
gttgtggataaactttcagtgaagaaagaaaaaatagctgatattcaaaaagccttggca
aatgctgatgtaaaccatgacaccaggcttgattttgacgaatggagaagtgaattgaaa
tctcgtggtcatgctgatgcagaaattgaagctgtttttgcgaaatatgatgtggatggt
gatcgcatcttagatgaaaaggaatgtaaaaaaatgcaggaagatttggaaggacaacag
gtcgaactcagtgatgagattgaagagatggagcgagctaaacaagaaggcagacctggt
acagctgtcactcgtgtaagcttccgtgacagtgatgtcgacagtgatgacgaaggagca
ctgagaggacgatctgattcaccttcgttacaacatcgaaatggtggagtaagcgacggt
gtatcctatgacgagttcactgtactgagtcgacgtgttgatcgaatggaacattcaatt
ggaagtattgtgtcaaagattgatgccgtgcttgtaaaactggaggctatggaaaaagcc
aagctaaaacggcgagaaaccatggcaagactgctggataacattactgaaggtgcaaat
acaaaatctcaggaagatcttaagcgagaccagatggaaagactcgttcgcgaagagctg
gatcactacggcagcaatgccagcctgcagtcagttgaaacagactctcaatcttttgct
tcgccatcacctattgaatcacgtgctcctactgcaaaatccatctacagtcatggggct
aaaagtgcgacatcacgtggccgtaagacagtcacagaaagtaatgcaagtcttcgaatg
gaaatgaatgaaggcattgaagcaccagtcagcgaagacagtaaagtgtga
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