Xenia sp. Carnegie-2017 (soft corals): 124446415
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Entry
124446415 CDS
T08024
Name
(RefSeq) protein SMG9-like
KO
K18735
protein SMG9
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124446415
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124446415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
MMR_HSR1
AAA_30
Ploopntkinase3
MeaB
AAA_18
AAA_14
AAA_22
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-GeneID:
124446415
NCBI-ProteinID:
XP_046853221
LinkDB
All DBs
Position
Unknown
AA seq
486 aa
AA seq
DB search
MDDRGFRGDQGNKGKGNRNRRDRGFRDPRERRPRPSNAKQDERLTVGTPPTQIKTPIILT
KQSEGKSGIELEKSISIKPREEGTGTTHIAGASPAFPQKISKSSIDAPISSGLLSSITSA
SSGRQQVQRRPIVGSSGGGIDGSDLTALNTTLKCYKIVDDKFHWNDHALEILTDQSDFLV
VGVIGCQGVGKSTILSLLANGLAEKDKGSCIFNPQSRQTEELSVNETTGIDMTITNDRII
FLDTQPILNASILDNVIRYERSLPSEVSSAENYAELQSLQITTFLFTVCHVILVVQDWFC
DLNVMRFLKTAEMLKPTSGVHSSSHESSSNLSSDEFDDYYPNVMFVYNKCSREDFEAKNI
QNMLLVTDVLFQNSRLRIKTSASLPSVDKFPFSYGFHQYADLNLFLVPMSEGLYEKEEKK
VNLLNYDGYPNLKVIVKQLRNQIFSMRRHHLTHHQLSEKNWYHFAARSWEMTKKSALLSE
YNRLLP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcgaggatttagaggggatcaaggaaataaagggaaaggtaatagaaatcgg
cgtgatcgaggatttcgagaccccagagagagacgtcctagaccaagcaatgctaaacaa
gatgaacgattgacagttggaactccaccgactcaaataaaaactccaattattctaacc
aagcaaagtgaaggaaaaagtggaattgagttggaaaaatccatcagtatcaagccaaga
gaagaaggtactggcacaactcatatagctggagcttctccagcatttcctcagaaaatc
agcaaatcatctattgatgcacctatttcttctggtctactttcttcaatcacatctgca
agctctggtcggcaacaagtacagcgacgtcctatagttggttcttctggtggaggaatt
gatggaagtgacctaactgcactaaacacaactttgaagtgttataaaattgtagatgat
aaattccactggaatgaccatgcattggagatcttaacagatcaaagtgattttcttgtt
gtgggagtaattggttgtcagggtgttggaaaatcaactattctttctcttcttgcaaat
ggcttagctgaaaaggataaagggtcttgcatatttaatccccaatcaaggcaaactgag
gagctaagtgtgaatgaaacaactggtattgatatgactattacaaatgacagaattatc
ttcttagacactcagcctattcttaatgcatccattttggataatgtcattcgttatgaa
agaagcctcccttctgaagtttcatctgctgaaaattatgctgaattacaatccctgcaa
attacaacattccttttcactgtttgtcatgtcattcttgtggtgcaagattggttttgt
gatctcaatgtgatgcgatttcttaaaactgctgagatgttaaagccaacctcaggtgtc
cattcttcatctcatgaaagttcaagcaacctgtcatcagacgagtttgatgactattac
cctaatgtcatgtttgtctacaacaagtgttctcgagaggattttgaggcaaagaatata
caaaatatgcttctagttactgatgttctttttcaaaactccagacttcgtataaaaaca
tctgcatcattaccttcggttgacaaatttcccttctcttatggttttcatcagtatgct
gacttgaatctgtttttggttccaatgtcagagggactttatgaaaaagaagagaaaaaa
gtcaatttgttgaattatgatggatatcccaatctaaaagtaattgttaagcagttgaga
aatcagatattttcaatgagaagacatcatcttactcatcatcagctttcagaaaaaaat
tggtatcattttgctgctcgttcatgggaaatgacgaagaagtcagccctactttctgaa
tacaaccgcttactgccatga
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