Xenia sp. Carnegie-2017 (soft corals): 124446452
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Entry
124446452 CDS
T08024
Name
(RefSeq) autophagy-related protein 16-1-like isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04136
Autophagy - other
xen04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124446452
04136 Autophagy - other
124446452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124446452
03029 Mitochondrial biogenesis [BR:
xen03029
]
124446452
Membrane trafficking [BR:
xen04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124446452
Others
Specific organelles associated proteins
Auto phagosome
124446452
Mitochondrial biogenesis [BR:
xen03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124446452
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
ATG16
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
ANAPC4_WD40
NBCH_WD40
eIF2A
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Tricorn_2nd
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_DCAF12
TSC22
Motif
Other DBs
NCBI-GeneID:
124446452
NCBI-ProteinID:
XP_046853260
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MASNYWKLELLQRLERRDRLEFLSFKDLIKSHNKLFDNADILQSKIVQLEIQTLQMKQEN
ADLQERASISGNSFSYSLSGTFNSDKVQAFEQKIYKLQEELTVLHRTKGENAQKVIELNK
TITKKDNDLSFKEAKLQDSHINLECMKTETKRLESTIMELEATNQMLKDELQALQLAYNS
LEMKYGRVQEDNRELVERWMIKKAKDADAMNLENEQQTKARQDRLRRDLMEAAKEPVTLP
PRSPMSSFDYNGDNLSSPSFCFSTSIPSVPLHKVNAHDGEVNTVGFSPNGQFFATGGSDK
LVKLWKIDKTCEVISKIYGCNAGVTSIEIDSQDKLILASSNDFACRVWTYGDGRQRHTLT
GHGNKVTSARFFLDSTKVVSGSHDRTLKIWDLKTRACSRTIFAGSSCNDLVTTSLASTTI
ISGHFDKRIRFWDSRSDTSSNEIVLSGRITSLSISPDRNTLLAATRGDALKLINLRMSQV
SGTLSADGLKIATDCTRACFSADGNYAACGSQDGSIFIWDTTTLKTEKVLKSNGAAVVCC
GWHPDGRSFVSCDRNKQVIVWSSM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaattattggaaattggaattacttcaacgtttagagcgcagagatcggctg
gaattcttgtcttttaaagatctcataaagtctcataataagttatttgataatgccgac
attcttcaatctaagattgttcaactcgaaattcagactcttcaaatgaaacaggaaaat
gcagatcttcaagagagagcctcaatttcaggaaatagcttttcttatagtttaagtggc
acattcaacagtgacaaagttcaagcatttgagcaaaagatttacaaactgcaagaggaa
ttgactgtcttacatcgaaccaaaggggagaatgcgcaaaaagtgattgagttgaacaaa
acaattacaaagaaagacaacgatttgtcatttaaagaagcaaagcttcaagattcacat
attaatcttgaatgtatgaaaacagaaacaaagagattggaatcgacgattatggaactg
gaagctacaaatcaaatgttaaaagatgaattgcaagccctacaattggcgtataactct
cttgagatgaaatatggaagagtgcaagaggacaatcgagagttggtggaaagatggatg
ataaagaaagcgaaagatgctgacgcgatgaatttagagaatgaacaacaaacaaaagct
cgtcaagacagattgagaagagatttaatggaagcagctaaagaaccagtgactttacca
ccaagatcaccgatgtcatcttttgactacaatggagataacctatctagtccttcattt
tgtttttctacaagtataccatcggtacctttacataaagtgaatgctcatgatggcgaa
gtgaacacggttggtttttctcccaacggacaattttttgccaccggtggatcagataaa
ctcgtcaaattatggaaaatagataaaacatgtgaagtcatttctaagatttatggctgt
aatgctggtgttacgtccattgaaattgattcacaggataaattaattttagcttcatca
aatgattttgcatgtcgagtttggacctacggcgatggtagacaacgacacactttgact
ggtcacggaaataaagtaacaagtgctcgattttttctcgattcaacgaaagtcgtatct
ggaagtcatgatcgcactttgaaaatttgggatctcaaaacaagggcttgtagtcgtact
atatttgcgggctcgagttgcaatgatctagtgacaacaagtttggcttcaacaacgata
atcagtggccattttgataagagaattcgattttgggattcaaggtcagacacaagttct
aatgagattgtattgtcaggtcgaatcacatcattatctatttctcctgatcgtaatact
ttacttgctgcaacaagaggagatgctttaaaactgatcaatcttcgaatgagtcaagtg
tcaggaacacttagtgcggatggtttaaaaatagctacagattgcacgagagcctgtttt
agtgcagatggtaattatgcagcttgtggttcacaagatggtagtatttttatatgggac
acaacaacattgaagacagagaaagtgttaaaaagtaatggtgctgcagttgtatgttgt
ggttggcatcctgatggacgttcttttgtaagctgtgacagaaataaacaagtcatagta
tggtcatccatgtaa
DBGET
integrated database retrieval system
