Xenia sp. Carnegie-2017 (soft corals): 124446541
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Entry
124446541 CDS
T08024
Name
(RefSeq) cell division cycle protein 20 homolog
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124446541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124446541
03036 Chromosome and associated proteins [BR:
xen03036
]
124446541
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
124446541
Chromosome and associated proteins [BR:
xen03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
124446541
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
eIF2A
Beta-prop_DCAF4
Beta-prop_Nup120_160
Ge1_WD40
RMC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
KNTC1_N
Beta-prop_VPS8
WDR54
DUF1513
Beta-prop_WDR19_2nd
Motif
Other DBs
NCBI-GeneID:
124446541
NCBI-ProteinID:
XP_046853340
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MSNFQFESSIDKCLERLNAPLANCTTPCWKRKRCNSLNTSVPLSPYNGSLSSRTPYKTPK
RIKPVGKTPMKTPRLKKTPHKTPVKNTPQFDRFISTRAVMDNEKNYFKIMNDKDSEFAEN
EQNLEVLERTRQEKVIKENLNEDCSSRILHFKQSAPAAREGYQNNLRVVYSQNRGSSKVK
SSRYIPKVPEKILDAPDLMNDFYLNLVDWGCNNCIAIGLTSGVYFCNYETQSTKQVLQMP
NDDYVSSVSWVKDGNVLAVGSSNTNIQLWDVETEKCLRTLCGHSGRVGSLAWNSCILTSG
GRSGKIINHDVRVAQHIVSTLNGHSQDVCGLAWSSDGRTLASGGNDNLVNVWYPLNNCEE
PLHSLTHHQAAVKAVSWCPWQRNVLSTGGGTADRCIRFWNVTSGSCLNTIDTKSQISSIL
WSKEFKELITSHGFSMNQLTIWKYPTLSRVADLTDHAGRILCMTMSPNGEYVASVAADET
LRIWKCFDQSQLKKRSTTVGLARSSSKTNLNMINKIR
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagcaactttcaatttgagtcctcaatcgacaaatgcctggaaaggctcaacgcacct
cttgcaaactgtacaacaccctgttggaagagaaagcgatgcaacagtttgaataccagt
gtgcctttgtctccttataatggaagtttatcctcaagaacgccgtataaaacgccgaaa
cgtataaaaccagtcggtaaaacacctatgaaaacaccacgattgaagaaaacaccgcac
aaaacccctgtgaaaaataccccgcagtttgaccgtttcatttccaccagggcagtaatg
gataacgagaaaaactattttaaaatcatgaatgacaaagattcggaatttgcagaaaat
gaacaaaatcttgaagtactcgaaagaactcgtcaagaaaaagtgatcaaagagaactta
aacgaagattgtagctcaagaatccttcattttaagcaaagtgccccagctgctagagaa
ggttaccaaaataatcttcgtgttgtatacagccaaaatcgaggatcgtccaaagtgaaa
agttctcgttacattcctaaagttcccgaaaagattttggatgcacctgacttgatgaat
gacttttacttgaatttggtcgattggggttgcaacaactgtattgcgattggcctgact
tctggtgtatatttttgtaactatgaaactcaatcaacaaaacaagttcttcaaatgccc
aatgatgattatgtatcaagtgtatcatgggtaaaagatgggaatgtcctagctgttgga
agcagtaatacaaacatacaactgtgggatgttgaaacagaaaaatgccttcgaacttta
tgtggtcattcagggagagtgggatctcttgcgtggaattcttgcatactcaccagtggt
ggccgatctggcaagataatcaaccatgatgtaagagtggcacagcatattgtctcaacc
ttaaatggccactcacaggatgtttgtggattggcatggtcatcagatggtcgcacttta
gcaagtggtggtaatgataatcttgtcaatgtatggtatcccctcaataattgtgaagaa
cctctacattcattgactcaccatcaagctgcagtcaaggctgtatcttggtgtccttgg
caacggaatgtgttgtcaaccggcggaggtactgctgatcgctgtatacgtttttggaat
gtaacttccggatcatgtctcaatactattgacacaaagtcacagatatctagcatatta
tggtcgaaggaattcaaggagctaatcaccagtcatggcttctcgatgaatcagctgacc
atctggaagtatccgacattgagccgggttgcagatcttacagatcacgctggacgaatc
ctttgtatgacgatgtctcctaatggagagtacgttgcgtctgttgctgctgatgaaacc
cttcgaatatggaaatgttttgatcaaagtcagttaaagaaacgatccacaaccgttggt
cttgcgaggagttcctcaaaaaccaatcttaatatgataaacaaaattaggtag
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