KEGG   Xenia sp. Carnegie-2017 (soft corals): 124446941
Entry
124446941         CDS       T08024                                 
Name
(RefSeq) cullin-4A-like
  KO
K10609  cullin 4
Organism
xen  Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03420  Nucleotide excision repair
xen04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:xen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    124446941
  09124 Replication and repair
   03420 Nucleotide excision repair
    124446941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:xen04121]
    124446941
   03400 DNA repair and recombination proteins [BR:xen03400]
    124446941
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xen04147]
    124446941
Ubiquitin system [BR:xen04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     124446941
DNA repair and recombination proteins [BR:xen03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      124446941
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      124446941
Exosome [BR:xen04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   124446941
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 DUF1776 DUF2018 DHQS_C HbrB
Other DBs
NCBI-GeneID: 124446941
NCBI-ProteinID: XP_046853784
LinkDB
Position
Unknown
AA seq 826 aa
MLPSENIQRSRELNDDPVERYECSKENVNKKRKRQNNVKNGNRGQTELDLIDLLPSKRRN
IEMDEENVDEGKNAGFGSPGRNFSAFTNNHLNERSPLNAKITGTKKLVVKNFKAKPKLPD
NFQDLTWGNLKEAIHAIHNKTSISSSLEDLYKAVENMCSHKMSTVLYEQLKEECEKHIKS
NLPCFTDDSLDCNLYLTRLNHCWEDHCQQMIMIRSIFLSLDRTYVLQNPSILSIWDMGLQ
LFRMHIVDNQIVEERTIEGLLSLIEQERNGDAVDRILLKSLLRMLSDLQMYHSSFEKRFI
KATDILYAAEGDRLMLETEVPEYLEHVRRRLQEENERLLYYLDHSTKKQLIPCVEKQLLG
KHSQNILQKGFEKLMDGSRMKYLTLIYQLFGRIRKGLEDICVAFSNYIKRCGLEIVVTED
PEKDKTMVQDLLDFKEKLDKIIKESFLEHEKFKNAMKDSFENFINKRPNKPAELIAKFID
IKLRVGNKESTEDELEKLLDRIMVLFRYIQGKDVFEAFYKKDLAKRLLVGKSASVDAEKS
MLSKLKQECGALFTIKLEGMFRDMELSKDVMVQFKQHLQNQHLPSNIDMVVNILTFGFWP
TYTPVEINLPTEMLRYQETFKKFYLAKHSGRKLLWQNTLGHCVLKTEFSKGNTKELQVSL
FQALVLLLFNDRINIPYEDIRNETRIEDGELRRTLQSLACGKARVIQKSPKGKDIGEDDT
FAFNFDFKHKLFRIKINQIQMKETPEENINTTERVFQDRQYQIDAALVRIMKTRKVLSHN
LLVAEVYNQLKFPVKPTDLKKRIESLIERDYMERDKDVQNQYHYVA
NT seq 2481 nt   +upstreamnt  +downstreamnt
atgctgccctctgagaatattcagagatcaagggagttgaacgacgacccagtagaaaga
tatgaatgcagcaaagagaacgtcaacaaaaaaagaaagcggcaaaataatgtaaagaac
ggtaatcgtggacaaactgagctcgatcttatagatcttttaccaagtaagagacggaat
atagaaatggacgaggaaaatgtggatgaaggaaaaaatgctggatttgggtcaccaggc
aggaacttctctgcgttcactaacaatcacctcaatgaacgttcgcctcttaacgctaaa
ataactggtaccaaaaaacttgttgtaaagaatttcaaagctaagccaaagttacctgac
aactttcaagatcttacttggggaaacttaaaagaagctatacatgccattcacaataaa
acttcaatatcttcaagtttagaagatctatacaaagctgttgagaacatgtgttcacat
aaaatgtccactgttctttacgaacaattgaaagaggaatgtgagaaacacatcaagtca
aacttgccttgtttcacagatgattctttggactgtaatctatatctgacaagactaaat
cattgttgggaagatcactgtcagcaaatgataatgatacgaagcatttttttatctttg
gatcgaacttatgttttgcaaaatccatccattctttcaatatgggatatgggtcttcag
ctttttcgtatgcacattgttgacaatcagattgttgaggaaaggaccatagaaggattg
ctgtcattgatagaacaagaaaggaatggggacgcagtggatcgtatattacttaaaagt
ctgcttcgcatgctttctgatcttcagatgtaccattcttcatttgaaaagagattcata
aaagcgacggacatactctatgctgctgaaggagaccgtttaatgctagaaactgaagtt
ccagagtatcttgaacacgtacgcagaagacttcaagaagaaaacgaacgtttgctctac
tatttggatcattcaaccaaaaagcagttaataccatgtgtagagaagcaactgctggga
aagcactcgcaaaacattctacagaagggatttgagaaattgatggatggcagtcgaatg
aaatatctcacattaatatatcaactttttgggagaatacgaaaaggtctagaggatata
tgtgttgcattcagtaattacataaagagatgtggcttagaaattgttgttacagaggat
ccagaaaaagataaaacgatggttcaagatttgcttgattttaaggagaaattagataaa
atcatcaaagaatcgtttttggaacacgagaaatttaaaaatgctatgaaagacagtttt
gaaaattttattaacaagagaccaaacaaaccagcagaactcatagctaaatttatcgac
ataaaacttcgagttggcaacaaggaatcaacggaagacgaattagagaaacttctcgat
agaataatggttctctttcgatatattcaaggaaaagatgttttcgaagccttttacaaa
aaagacttagcgaagcgtctccttgttggtaaaagtgcatcagttgatgcagagaagtct
atgctttctaaattaaaacaagaatgtggtgcgttatttactataaaactggagggtatg
ttccgtgacatggaattatctaaagatgtgatggtgcagtttaagcagcatttgcaaaat
caacatctaccaagtaatattgatatggtagtgaatattttgacgttcgggttttggcca
acgtatactccggtagagattaatctacctactgagatgttacgctatcaagaaacattc
aagaaattttaccttgccaaacatagtggacgaaaacttctttggcagaatacgctggga
cattgtgtactaaaaacagaattttcgaagggcaatacgaaagaacttcaagtatctttg
tttcaagcacttgttcttctcttgttcaacgatagaattaatattccttacgaagatatc
cgtaacgaaactagaatagaggatggcgaacttcgcagaacgttgcagtcacttgcttgc
ggaaaagccagggttattcaaaagtcacccaaaggcaaggatattggtgaagatgataca
ttcgcattcaattttgactttaaacataagttattccgtattaagatcaaccagattcaa
atgaaagagacgcccgaagaaaacatcaacactacagagcgtgttttccaagacagacaa
tatcagatcgacgctgctcttgtgcgaataatgaaaacaagaaaagttctaagtcacaac
ttacttgttgctgaagtttacaatcagttgaagtttcctgtaaagcctactgatttgaag
aaacggattgaaagtttgatcgagcgtgattatatggaaagagataaggatgtacaaaat
caatatcattatgtagcataa

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