Xenia sp. Carnegie-2017 (soft corals): 124447129
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Entry
124447129 CDS
T08024
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xen01002
]
124447129
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124447129
Enzymes [BR:
xen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124447129
Peptidases and inhibitors [BR:
xen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124447129
Ubiquitin system [BR:
xen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124447129
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
DUF1072
Motif
Other DBs
NCBI-GeneID:
124447129
NCBI-ProteinID:
XP_046853983
LinkDB
All DBs
Position
Unknown
AA seq
2513 aa
AA seq
DB search
MTVSVRGGVPLDQTVPVEGTSQDDEQLEGKGESSETTPAVNDEENEDNEVILDENGCPVF
PIEELSRLDEMIGRQKWVVPVLPKCELEILLRTSIKLCRAGLDTKSEQCQRFFREGLTVS
FQKILNDDAVHSWKYEIQKCIYNSTKLLIELCVLKLSQDWFVLLDMLALAFNPHCRFHIF
NAGRAAMNCGQVAQDGEMEIFATPRSSKGWLIDFVNHFGMLGGFKLLQERICNGGSLSVS
LLAALIRPFGPCAQVLCSGTVKKYFAPVIECVQKFLDNLTNEELKKETKNESKTDSLSSI
IKALKSLAAKLPKGEEVGKDLETFRLKMIFRLLQVSSFNGKMNALNEINKVISSVSYYSQ
RHLDDEEWLTADKMAEWIHENDVLSIVLKDNLHQPQYVEKLEKIIRFVIKEKALTLVDLD
HIWSAQAGKHDVIVKNIHDLLAKLAWDFSAEQLDHLFECFQESWTNASKKQREKLLELIR
RLAEDDKEGVMAHKVLGLLWNLAHKDDVPTDIMDQALSAHIKILDYSCSQDRDSQKTQWI
NRCVEELRNDTWVLPAIKQIREICCLFYEAPTNYSHTQKNPHVFYRHDVINDLQTRHQLI
SLMASNLKNYMSSVRDMEFDKSSDPDDLLPDGRYCHVQQVQKRLSFLRFILRDGQLWLCA
PEAKIIWEALGENSVFESDREACFKWFSKLMGDEQDLNPEISGVFFESKVLKIDQSCLTE
NGMECFERFFQKVNIKEGKFVSKRRMLVMDDLDLIGIDYLWEIALRGSERIVGRAVNLLK
QSYTNLGPRLRANQVDIHEKIIQKCMHNVKPSYEVLQKESVNRKNCKNKSNDSKIREAAL
RIVRCLTVLREYIAECDDDYSEERIILPHGRSYCGKHITLVIRTATQGRPSDDFELWSHL
NETIASVRRHILQRMRNHYPQITRIDLYIGGELLSPVDDKRLIGKCNLPERVIITVRIGN
ANSSMPSSPDSSDDSSGSPPATLDGPNIEAERCLPGVIIATKTQYVESFLRLAEYSIQFD
IPELREEVWFLLGIIPTDRSMVENMRKACSYKAEKEDGSDSRSFEACFNSSLSSQTVYNL
ETLYALLMPAGQLHREKAVDFQMAFFKSGGVKCILDLVTKPNFLEFSDTWTRSLSNTDED
HKVCINSVAYAKVYIVAEAFRADTRSDISDETKDAAVVLQQALQCIPNLILECVLRTYAL
SLGQRNSEEISLHTPDFRVVKAIQKISWTAAGGMMDILRASPDEIHKSFEKMDLTSHFLD
INDINTCKESTEVLTLCLAIQPNHLETLSKDRSWQSFITDLVLRCNNSSLRWYVVEQFFV
MATRCSDGHRPLIFFITLLFSVLTTIVENNPETSGEYFTLLSKLLHFAHSVHAPYSTAEK
LLTNEIHWLKRAKDLVKSTGNCESVQGCLLEGHILIARELLLFLSPVKKHYIGCAPDGPC
LVKELLDEFIFPASKMVIESRKCGDVWNKPVIAVCNTSPTLVAAFELLVSLCTGCIENLQ
YVANALTELYYSGNEMPLLEWEYTPPIGPRPMRGFVGLKNAGATCYMNSVIQQLFMICKV
RDGILVADETLSLPDEESVNNDEKTESEGTSDTGYYSEDTKDYNNEKDCNDREKEAKLNL
RYQKSILRQMQFIFGHLKESQLQYYVPQGLWKTFKYQGERVNLREQHDALEFFNSLIDIL
DEGLKAVGHEPVLIRVLGGIFADQKICKGCPHRYSKDDPFIALTIDIRNHQNLIESLDQF
VKGDLLEGANAYHCDKCNKKIDTVKRMCFKKLPKVLAIQLKRFDYDWERDVAVKFNDYFE
FPREFDMEPYTVQGLARIENDPGEFDESTTTIYEEDEKRELLSTKYRLVGVVVHSGQASG
GHYYSYIRTTTHGCTSWFKFDDGDVSDCKMDDDEELKTQCFGGEYMGEVFDHMMKRMSYR
RQKRWWNAYILFYERIEEEDNGFVLVKNDVKIPCAIEQEVRKQNMEFLHNRIQFSNEYFD
FIRKLVTVNINLDSEDVEDLAMISMQLLSKFLFSCGLRTKKTIRGPAGDWYEAITGLLRQ
SKIVRLWFAQNVLFTHSERISEYLLESPSPEVRTMFARMLVFLCRASRSDGECDPPYVME
EKQLENNEGTKKTVLSEYILRAVLKLLDKEVPENGRNLHQYFSFFCLYMNLGTYEKKQLL
DLNVPAAFIQLALDEGPGLSIRYQYPELGKLHAVISCLIRSCDVSHRWQSSMDNGQPIRM
RDMETIMKLQSNVDEQIFVRFNYIKKMIECYTDAEETVLLLKYCCWENPQFSSSILKELL
FQIACLYTYELRPYMDLLLEMTFLKDSWQRHRIANILKGSDGKDGIFDTIQRSRNHYHKR
VYQCIKFLVALFSNSQMAYQVVLDSHDLKSKWTAAVDWLNDELDRRPFGSSNAYPYNNWS
PPAQSNETSNGVFLERSQSARLTLQKAFEFVPEEEQEETAVEDVTECEITEDENSSERES
NAAANQSTSSISGQSDSTIPQSADQSLDEVDSSLNDSEKQEDDTSTGKSNEAL
NT seq
7542 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtctgtaagaggtggtgtaccccttgatcaaactgttccagtcgagggcaca
agtcaagatgatgaacagcttgaagggaaaggagaaagctcggaaacaacacctgctgtc
aatgatgaagaaaatgaagataatgaagttattctggatgaaaatggttgtcctgtattt
cccattgaagaactttcacgacttgatgaaatgataggccgccagaagtgggttgttcct
gttttacccaaatgtgaacttgagatcttgctaagaacatccattaaattgtgtcgagca
ggtcttgacacaaagagtgaacaatgtcaacgattttttcgtgagggtctaacagtttca
tttcaaaaaattttaaatgatgatgccgttcatagctggaaatatgaaattcagaaatgc
atctacaactcaacaaaacttttgatagagctttgtgttcttaaactatcacaagattgg
tttgtcttattggatatgttagcactagctttcaatcctcattgccggtttcatattttc
aatgcaggaagggctgcaatgaattgtggtcaagttgcccaggatggggaaatggaaata
tttgccactccgcggtcatcgaagggctggctaatcgatttcgttaatcactttggaatg
ttgggaggcttcaagcttctacaggaacgtatatgcaacgggggatcgttatcagtgtca
ctgttggctgcgttaataagaccttttggtccttgtgcgcaggtactttgctcagggacg
gtgaagaaatattttgctcctgttatcgaatgtgttcaaaaattcctggacaacctgaca
aatgaagaattgaaaaaggagacgaaaaatgagtcgaaaacagactcactttcatcaatt
ataaaggcattaaagtccctggcagcaaaacttccaaaaggtgaagaagtcggcaaagat
ttagaaacgtttcgattaaagatgatatttaggttgctgcaagtatcttcttttaatgga
aaaatgaatgctttaaacgagatcaacaaagttatttccagtgtttcctattactctcag
cgtcatttggacgacgaagaatggttaacagctgataaaatggctgaatggatccacgaa
aacgatgttttgtctatagttttgaaagataatcttcatcaaccacagtatgtagaaaaa
ttggaaaaaatcatccgatttgtaataaaggaaaaggctctgactttggtagatcttgac
catatctggagtgcgcaggctggaaagcatgatgtcattgtgaaaaacattcatgaccta
ctggctaaactggcctgggatttttctgctgagcaacttgatcatttatttgaatgcttt
caggaaagctggacgaacgccagtaaaaaacagcgcgaaaaacttctagagctaattcga
aggttggctgaggatgataaagaaggtgtaatggcgcacaaggtacttggcttgctctgg
aacttggctcataaggatgatgtgcctaccgatataatggaccaagcattaagtgctcat
ataaagatacttgattatagctgttcacaggatcgtgattctcagaaaactcaatggata
aacagatgtgttgaagagcttcgtaacgacacatgggtacttcctgccatcaaacaaata
cgtgaaatatgttgcttgttttatgaggctcctacaaactattcgcatacgcaaaagaat
ccacacgtattttaccgtcatgatgttatcaatgatttacaaactcgtcatcagttgatc
tctctcatggcatccaatctaaagaattatatgtctagtgtcagagatatggaattcgat
aagtcgtccgatcctgatgatttgttacccgatggaagatattgtcatgttcaacaagta
caaaaacgattgagttttctcagatttattttacgagatggacaactgtggttgtgtgct
cccgaagcaaagattatatgggaagctttaggtgaaaactctgtttttgaaagcgacagg
gaagcttgttttaaatggttttcaaagttaatgggtgatgaacaagatttgaatccagaa
attagtggtgtattttttgagagcaaagttctaaaaattgatcaaagttgtctcaccgag
aatggaatggaatgcttcgaaagattctttcagaaagtaaatattaaagaaggaaagttt
gtgagcaaacgtcgcatgttggtgatggatgatcttgatctaatcggaatcgattactta
tgggaaattgccttgaggggatcagaaaggattgtgggtagagctgttaatcttttgaaa
caaagttatactaatcttggaccaagattacgtgcaaatcaggtcgacattcacgaaaaa
ataatacaaaagtgcatgcacaatgtgaaaccgtcctatgaagttttacaaaaggaatct
gtgaacagaaaaaactgtaaaaataagagcaacgactcaaagatacgcgaggcagcatta
cgtattgtaagatgtttgacagtcctacgtgaatatatcgctgaatgtgatgacgattac
agcgaggagagaataatattaccgcacggtcgatcgtattgcggcaagcatattacatta
gttataagaacggctacccaaggtcggcctagtgatgacttcgaactatggtctcatctt
aacgaaactattgccagcgtgcggcgacatattttacaaaggatgcgtaaccattatccc
caaattacgagaattgatttatatattggcggcgagctgctctctcctgttgacgataaa
agattgattggaaaatgtaacttgcccgagcgtgtgataattactgtaagaattgggaat
gcaaattcttcgatgccttcctcaccggattcatcggatgactcatccggttctcctcct
gccacgttagatggtcctaacattgaagctgaacgctgtttacctggagtgattatagca
acgaagactcaatatgtggaatcatttctccgtttggcggaatactccatacaatttgac
attcctgaactacgagaggaggtctggtttttattgggtataatccctacagatcgttca
atggtggagaatatgagaaaagcatgttcttataaagcagaaaaagaagacggttcagat
tctcgttcgtttgaagcatgcttcaattcttcattgtcttctcaaacagtttataatctc
gagacgttatatgctcttttgatgccagctggacagttacatcgtgaaaaggctgtggat
tttcagatggctttctttaagagtggtggagtaaaatgcatccttgatcttgtcacaaaa
cctaattttttggaattttctgatacgtggacaagaagcttatctaacactgatgaagat
cacaaagtttgcattaactcggttgcatatgctaaagtttacatagttgccgaggcgttt
cgagccgacactcgctcagatatatctgatgaaacaaaagatgctgctgttgtactacag
caagctttacaatgtataccaaatcttatcttggaatgcgttctcagaacgtacgccttg
tcgcttggacagcgcaattctgaagaaatttcactacatactcctgatttccgtgttgta
aaagcaatccaaaagatttcttggacagcggcaggtggtatgatggacatacttcgtgct
tcaccggatgaaatacataaatcttttgaaaagatggacctaacttctcacttcttggat
attaatgatattaatacgtgtaaggaatctacagaggttttaactctgtgtctcgcaatc
caaccgaaccacctggaaacgttgagtaaagatcgatcgtggcaaagttttattacagat
ttagtactacgctgtaataacagctctttaaggtggtacgttgtcgaacaattttttgtc
atggcaacacgatgttcggatggtcacagacctttaatatttttcattactttgctgttt
tccgtcttaacgacaattgttgagaacaaccctgaaacaagtggagagtattttacattg
ctctcaaagttgttgcatttcgcacattccgtacacgcgccctattctactgctgaaaag
ttattgacaaacgaaatacattggcttaaaagggcgaaggacttggtaaaatcgacagga
aattgtgaatccgttcagggttgtttgcttgaaggacatatacttattgcaagagaactg
ctgttgtttcttagtccagtgaaaaaacattatatcggatgtgctcccgatggaccctgt
cttgtcaaggaactgttggacgagttcattttcccagcatccaagatggtcatagaatcg
aggaagtgtggtgatgtatggaataaaccagttatcgctgtttgcaatacgtcaccaaca
cttgtcgctgcttttgagttgctcgtatcgctatgtactggttgtattgagaatctacag
tatgtagcgaatgcactcacagaactatactattcaggaaatgagatgcctctcctggaa
tgggaatacacgcctcccattggtccacgtccaatgagaggatttgttggtttgaagaat
gccggagctacatgttacatgaattctgttatccaacagttgttcatgatttgtaaagtt
cgtgacggtattcttgttgctgatgagacgttatcattgcctgatgaagaatctgtaaac
aatgacgagaaaactgagagcgagggtacaagtgatactggatactattcagaagacacg
aaagattataataacgaaaaagactgtaatgacagagaaaaggaagcgaaactaaacttg
agatatcaaaagtcgatactcagacagatgcaattcatatttggtcatcttaaagaaagt
cagttgcaatattacgttcctcaaggattgtggaagacattcaaataccagggggaacga
gtgaatcttcgtgagcaacacgatgcgctggagttctttaacagtttgattgatattctg
gatgaagggctaaaggctgttggccacgaaccggttcttatacgtgttcttggtggcatt
tttgctgatcaaaaaatttgtaaaggttgtccacacagatactccaaagatgatccattt
attgccctaaccattgatattcgtaatcaccaaaatctcattgaatctcttgaccagttc
gtgaaaggcgacttgctcgagggtgcaaatgcttatcattgtgacaagtgtaacaaaaaa
attgacacagttaaaagaatgtgttttaaaaaactaccgaaagttctggctatccaactg
aagcgctttgattatgattgggagagggatgttgcagtgaagttcaatgattattttgaa
tttccaagagagtttgatatggagccatatactgtacaaggtcttgctagaattgaaaac
gaccctggcgagttcgacgaaagcacaactacgatatatgaagaagatgaaaagagagag
ttattgagtactaaatatcgtctagttggtgtcgttgttcatagtgggcaggcatctggc
ggtcattactactcgtacataagaacgacaactcatggatgcacaagttggttcaaattt
gacgacggtgatgtaagcgattgtaaaatggatgacgacgaggaattgaaaacgcaatgt
tttggtggtgaatatatgggagaagtatttgatcacatgatgaagagaatgtcgtatcgt
cgtcaaaaaagatggtggaatgcttatatcttgttttacgagaggatagaagaggaagac
aatggttttgtcctggtcaaaaatgatgtaaaaatcccttgtgcgattgaacaagaggtt
agaaaacaaaacatggaatttcttcataacagaatacagttctcaaacgaatactttgat
ttcattcgaaaactggtgactgtgaatattaatttggattcggaagatgttgaagatcta
gccatgatcagcatgcaattattatcaaaatttttgttttcttgtggactacggactaaa
aagactataagaggtccagctggagattggtacgaggctatcaccggtctcttacgtcag
agcaaaatagttcgtttgtggtttgctcaaaatgtcttattcactcactcagaaagaatc
tccgagtacttactagagtcaccatcacctgaggtccgcactatgtttgcaaggatgtta
gtatttttgtgccgtgcatcaagatctgatggtgaatgtgatccaccttacgttatggag
gaaaaacagttggagaataatgaaggcactaagaaaacagttttaagtgaatatattctt
cgtgccgtattgaaattactcgataaggaagttcctgaaaatggacgaaatttgcatcaa
tatttctcattcttttgtttgtatatgaatcttggaacttacgagaaaaaacaactattg
gatcttaatgtacctgcagcgtttatacaattggctctagatgaaggccccggtttatcc
atacgatatcagtatcctgaacttggaaaacttcatgctgttatttcctgtttaatacgg
tcatgtgacgtgtcacatagatggcagtcttctatggataatggacaaccaattcgaatg
agagatatggaaacgattatgaagttacaaagcaatgttgatgaacagattttcgtacgg
ttcaattacataaaaaaaatgatagaatgttatactgacgcggaggaaacagtgctgctt
ttaaagtattgttgctgggaaaatcctcaattctcgtcgtcaattctaaaggagctttta
ttccagattgcttgtttgtacacgtatgaattgaggccttacatggatttgttactggaa
atgacttttcttaaagactcttggcaaagacatcggattgccaacattttgaaaggaagt
gatggaaaggatggcatctttgatactatacaacgatccagaaatcactatcataaacgt
gtttaccagtgtataaaatttctcgtcgcattgtttagcaatagccaaatggcttatcaa
gttgtcttggattctcatgatctcaaatcgaagtggactgctgctgttgactggttgaat
gacgagctggatagaagaccatttggctcatcaaatgcttatccctacaataattggtcg
ccacctgcacaatccaatgaaacatctaatggcgttttccttgaacgttcccaaagtgca
agattaacattacaaaaagcatttgaatttgttccggaagaggagcaagaggaaacggca
gtggaagatgtgacagagtgcgaaatcactgaagacgaaaactcttctgaacgagaatct
aatgctgcagcaaaccaatcaacatccagtatttctggacaatctgattctaccatccct
caaagtgccgatcaatcattggacgaagtggactcgagtttaaatgactctgaaaaacag
gaggacgatacaagcacgggaaaatcaaatgaagcattataa
DBGET
integrated database retrieval system
