Xenia sp. Carnegie-2017 (soft corals): 124447194
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Entry
124447194 CDS
T08024
Name
(RefSeq) TBC1 domain family member 1-like
KO
K18341
TBC1 domain family member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xen04131
]
124447194
Membrane trafficking [BR:
xen04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124447194
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
124447194
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
124447194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PID
DUF3350
Motif
Other DBs
NCBI-GeneID:
124447194
NCBI-ProteinID:
XP_046854042
LinkDB
All DBs
Position
Unknown
AA seq
1203 aa
AA seq
DB search
MHSSKSYDGISCNNDSSVNLRLAYFGSLLIDKRYTSCMIPWIVAEIKRKNQRQDIHFAVG
HTSVTGFVKNETVVEHGLIHISKCIKLEGKDSSTFAYLLKDSRNNAICSCHVFEAENTSK
ASQFLVCLKQALQECKKQMPLKETLKLQDVPVENGSKEDEHIVKYYVTYIGKLAVSHRKA
PPSLIDTSIERFRHRSQQYLLSAKSNDLKAVQNGSHTPSNEMPPKLKSLRMNSEDNQLVE
SDSDDQQRPRSSSDHTTSSHININSSYEATAGKSKANSYGLNESDSLVMSISVYSITFSS
SVSGKIAMERKVQEISFCQQGTIEPEHFGFICHNPSTSNYHCYVFKAHSKHEVDNIMKSL
KRAFNSAWLAVGSLAACEKCPLHKLHLLCQALEGERPGDQEILIRHHLMDNFGESVVEDL
KKKCKIESKRRDLVEQNEVMMSLLRVLYEDMQKVHRHSSGGQSRSTSQAKEKPQQNKFMA
KAKRSLGDIFRSKVRMSRNETDGTSSDEAESKIGSSKHFVTIQQQENNSSEASEHHVNDE
KREVTTSDDTVKKSKRKHRRSYSDISHVVKSHNGMVNNVNEIREHVSDDEHFTVDHPQSG
STTTTPSKKLSRKQSYRRAIFDSVVTPTKITKAERMVSNDNVIPEIITNKKSPEQLRALW
RKAILEQRLLIRMERENLKLRAGEGIAKNKRLKLEYREVLSSNSGANEMWNKLMNEKEKL
IEKKDLLEAVKFGIPKNRRGEIWRYLLKQDLLRRKPSTMPSVSLSYKELKEMRSIHQHAI
LIDCNRTFPAHPYFSQHVGVGQFALFNLLKVYSNMDPDLGYCQGLSFVAGILLMHLGEEE
AFEVLTHLTFHYGLRNQYMPDMAGLRVQFYQYSRLLHDACPNLHDHFECYEVTPTLYAAS
WFLTLFSSLFPLSFACRVLDLLCLGGLETIFKVAITLISRFEKNILACQSLETIVDFLKI
ELPKLAVDEQESIVSDVLALEIGDKLFRFEVEYQVLQEENPSLLKPLLEKTAEENRKLKE
NLILLKDKLKQKQRDEETLLEKLKHLETENARLKMMAMGKGSVVLNGTHSNANGSVLCND
VNGCSSDLFSDVSGNTSPTHDSVAVHSFELNHSFVLNQNDITSDRGVTYSDITTQSCLPN
DSGVNGRNCSSPFDEQSDSYEHILDETDDEIDRLSCDSPLTIELGPDEQNNTTESQKSNS
TKL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgcatagttcaaaatcgtatgatgggatctcctgtaacaacgactcttcagttaaccta
cggttagcatactttggttctctgctaattgataaaagatatacatcttgcatgattccc
tggattgttgctgaaatcaagaggaaaaaccaaaggcaagatatacactttgctgttgga
catacaagtgttacaggatttgtaaagaacgaaacggttgtagaacatggcttgattcac
atatcaaaatgcataaaactggaaggcaaagattcatcaacgtttgcttaccttctgaaa
gactcaagaaacaacgctatttgctcatgccatgtttttgaagccgagaatacaagcaag
gctagccaatttcttgtttgcttaaaacaagctttacaagaatgcaagaaacaaatgcca
ttgaaagaaactttaaagttacaagatgttcctgtagaaaatggctcaaaagaggatgaa
catattgtaaaatattatgttacttacattggaaaattggctgtatcacacagaaaagcc
cctccttcattgatcgatacatctatagaacgttttcgtcatcgtagtcaacaatattta
ttgtcagcaaagtcaaacgatttaaaagcagttcaaaatggcagtcacacaccttctaat
gaaatgcctcctaaattgaagtcattaagaatgaatagtgaggataaccaactagtagaa
agtgattcagatgatcaacaacgaccacgttcatcaagtgatcacacaacgtcatcacat
ataaatattaattcttcctatgaagcaacagctggcaaatcaaaagcaaactcgtatggc
cttaatgaaagtgacagccttgttatgagtatttctgtttattcaattacatttagttca
tctgtctcagggaagattgccatggaaaggaaagttcaagaaatatcgttttgtcagcag
ggtaccattgaaccagaacattttggctttatttgccataatccttcaacctctaactat
cattgttatgtatttaaagcacattctaaacatgaggttgataacattatgaaatcgtta
aaaagagcttttaattcggcttggctagccgttggctctttagcagcttgtgaaaaatgt
ccgttacacaaattacatctgttatgtcaagcacttgaaggtgaaagacccggtgatcaa
gaaatcttgattcgtcatcatttgatggataattttggggaaagtgttgttgaagattta
aaaaaaaagtgcaagattgaatcaaagcgtcgtgatttggtggaacaaaacgaagttatg
atgtcattattacgtgttttatatgaagatatgcaaaaagttcatcgtcattcatctggt
ggtcagagtcgttcaacgagccaagcaaaggaaaaacctcaacaaaataaatttatggcg
aaggcaaaacgctctttgggagatatttttcggtctaaagttagaatgtcacgtaacgaa
acggacggaacttcttcagacgaggcggaaagtaagattggatcgagcaaacattttgtg
acaattcagcaacaagaaaataactcaagtgaagcatcagagcatcatgtcaatgatgag
aaaagagaagtaacaacaagcgatgacacggtgaaaaaatccaagcggaaacatcggcgg
tcttacagtgatatcagtcacgtggttaaatcacataatggcatggttaacaatgttaat
gaaattcgtgaacatgtatcagatgatgaacattttactgtggatcatccacaaagtggg
agcaccacaacaactccaagcaaaaagttatctcggaaacagtcttaccgtcgcgctata
tttgacagtgttgtaacaccaacaaaaattacaaaagcagagagaatggtatctaatgat
aatgttatacctgaaattataaccaataaaaaatcaccagagcaattacgtgcattatgg
agaaaagcaatcttagagcagcgattattaattagaatggaacgagagaatttgaagctg
cgagctggagaaggaatagccaagaataaacgtttgaaattagaataccgtgaagtttta
tccagtaatagcggagctaatgaaatgtggaacaaattaatgaatgaaaaagaaaagttg
attgaaaaaaaagaccttctggaagcagtaaagtttggaataccaaagaatcgccgtgga
gaaatttggagatatttgttaaaacaagatttattgcgacgtaaacccagtacgatgcca
tctgtttctttatcttataaagagttgaaggaaatgagatccattcatcaacacgcgatt
cttatagactgcaaccgaacgtttcctgcacatccttatttcagtcaacatgttggagtt
ggtcaatttgctctgtttaatttactgaaagtttattctaacatggatcctgatctggga
tactgtcaaggattgagctttgttgctggaattcttttaatgcatcttggcgaggaggaa
gcttttgaggttttgacacatttaactttccattacggtttacgtaatcagtatatgcct
gatatggcgggacttcgtgttcaattttatcaatattctcgtttacttcatgacgcctgt
ccaaatctacatgatcattttgaatgttatgaagttacaccaactttgtacgctgcttct
tggtttttaacgctcttttcttcattgtttccactctcgtttgcttgcagagtgttggat
ttgttgtgtcttgggggattagagacaattttcaaggtggccatcaccttaataagtcgg
tttgaaaaaaatattttggcatgccagagtttggaaacgattgttgattttttgaaaatt
gaacttccaaagctagcagttgatgaacaagaaagcattgtcagtgatgttctcgcactg
gaaataggtgataaacttttccgttttgaggttgaatatcaagttctacaggaggaaaac
ccatctctgttaaaaccgttattggaaaaaactgctgaagagaacagaaagctaaaagag
aatctcatattactaaaagacaaattgaagcaaaagcaacgagatgaagaaacattactt
gagaaactaaaacacttagaaactgagaatgctcgactgaagatgatggcgatgggcaaa
gggagtgttgttttaaatggaactcatagcaatgcaaatggttctgtattgtgtaatgat
gttaatggatgtagcagtgatttgtttagtgacgtttctggaaatacgtctccaacacat
gatagtgtagccgttcatagttttgagttgaatcatagttttgtgttgaatcaaaacgat
atcacatcagatcgtggtgtaacatatagtgacatcactacacagagctgtctcccaaac
gatagtggagtcaatggtcgaaactgctccagtccttttgatgaacagagtgatagttat
gaacacatccttgatgagactgatgatgaaattgatcgcttgtcatgtgattcaccatta
actatagaactcggtcctgatgaacaaaacaacacgacagaatcacagaaaagcaactct
actaaactttag
DBGET
integrated database retrieval system