Xenia sp. Carnegie-2017 (soft corals): 124447506
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Entry
124447506 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124447506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xen03019
]
124447506
Messenger RNA biogenesis [BR:
xen03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124447506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Mur_ligase_C
Motif
Other DBs
NCBI-GeneID:
124447506
NCBI-ProteinID:
XP_046854417
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MASTNEVENVTDSLAKTSVKHVNVVCLADSGRKLDTAEDVAEIVKKIEESQDVQALSLEG
NTLGVEAAKAIAQALSKRKEFEKALWNDMFTGRLKAEIPKALESLGDAVITAGAQLSELD
LCDNAFGPDGVKSVSKLLKSPSCFSLKTLKFNNNGLGIGGEKILSEALLECHKASVAAGT
PLKLQXFVAGRNRLENEGSIALARAFTEIGTLEEISMPQNGINHPGISALAKSFEHNIAL
KVVNLNDNTFTAKGAIAMSKVLPSLTNLEVINFGDCLVKSKGASAIADALKTNHAKLKEL
ILTFCEINKDAALQVVESLENKKEFKKLYLNGNSIGEDGIKEVQNRLIELKLDNVLDSMS
DDEGEDSETDDDESDEEDEDGGDEEKEKVNDEKIKSEQDDVKSAEKFLLHPSLESFTNLP
HENRVELIQRSLKACINDAMSICKLFVEVSSMIHNTRDFLPCTDLILREAFSVCDKPETV
INDLLVFMGLLKSEEKIKPTCQDITGVLLALDNAIKQEYFPKDCAFILTAFLSKQNTTVT
CLPSAKSSFLETLKQL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacaaacgaagttgagaatgttactgactctctggctaaaacgtctgtaaag
cacgtcaacgtggtgtgtttggctgacagtggacggaaactggacacagcggaagatgtt
gctgagattgtaaagaaaattgaagaaagtcaagatgtgcaagccctatcattggagggg
aatacccttggtgtggaggctgcaaaggccattgcacaagcattgtccaaacgaaaggaa
tttgagaaagctttatggaatgatatgtttactggaagattaaaagcagagataccaaaa
gctctggaaagtcttggtgatgctgtaataactgcaggggctcaactttcagagttggat
ttatgtgacaatgcatttggacctgatggtgtgaaatcagtatcaaaacttctgaaaagt
ccgtcttgtttttccttaaaaactttgaaatttaataataatggtctgggaattggtggg
gaaaagattttgtcagaggccttattagaatgtcacaaagcaagtgttgctgctggcact
cctttaaagcttcaangttttgttgctggacgaaatagattggaaaatgaagggagtatt
gcattggctagagcttttacggaaattggaactcttgaagaaatctccatgcctcaaaat
ggtataaatcatcctggaatatcagctttggccaagtcttttgaacataacattgctctt
aaagttgtgaatttgaatgacaatacatttactgctaagggtgcaatagctatgtcaaag
gttcttcctagccttacaaatttagaagttattaactttggtgattgtttggtaaagtca
aaaggagcaagtgccattgcagatgctctaaaaacaaaccatgctaaattgaaggaattg
attttaacattttgtgaaataaacaaagatgcagctttgcaagttgtagagtcattggaa
aacaaaaaagaatttaaaaaactttatctaaatggtaactctataggagaagatggcata
aaagaagttcaaaatagattaatcgagcttaaacttgacaatgttcttgattcaatgagt
gatgatgaaggtgaagattctgaaactgatgatgatgaaagcgatgaagaagatgaagat
ggtggcgacgaagaaaaagaaaaagtcaatgatgaaaagataaaatctgaacaggacgat
gtaaaaagcgctgagaaatttttgcttcatccgtctttggaaagttttacaaacttgcca
catgaaaacagagttgaacttatacagagaagtttgaaggcgtgtataaatgatgcgatg
tctatttgtaaattatttgtagaggtgtcctctatgattcacaacactcgtgattttctt
ccgtgtacagacttgattctacgtgaagccttctcagtttgcgataagcctgaaacagtt
ataaacgatttactcgttttcatgggattattaaagagtgaagagaagatcaaaccaact
tgtcaagatatcactggtgttttattggcacttgataacgctataaaacaggaatatttt
cccaaagattgtgcttttattttaaccgccttcttgtcaaaacaaaatacaacagtcacg
tgtttaccatcggcaaaaagctcctttctcgaaacgctaaaacagttataa
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