Xenia sp. Carnegie-2017 (soft corals): 124447522
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Entry
124447522 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124447522
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124447522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124447522
NCBI-ProteinID:
XP_046854431
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MSQTSLIEDRKKEMKSDYSTPLIERKNTNGETQSSATSCLKAKKSPLNPLIRAVRRGILM
TQRYLEKTKNEHLSIADSDDIRRNIFHLSVQREELLEILLKHFEKHEQLMEALHSEDLNG
HTPAHVAVLHSQRKSLQILAGVDENVYALRSSKNGQTLIHCAVDSCNPYIVQDILSVRPE
SLFDKDDEGRSPQHYAAALQESFLLDILLSRGANILETDNNKSTLLHEAAQAGSISNVDL
LVVDEVTLLHATDMEERTPLHVACAKGFRNIVSFLLENGADPQARSTDGKNCLEVAIIHK
QEYVVNELLMSTYWKDLICDWKNGAMKCFAYLAEKMPNQAKLLLDRCVVTSDDKRHSLDY
NVTYDFFLFDNAGSNPPAFHALKAILKNDEEKCLTHKLCRKYMSVKWREKGCYIFLIDFI
LFACFHILFNVYVALVRGGITKQWLHNNEHSRNATLSTNYPRPIANPDDTGPVIATSIIV
TLTVLNVLKEFVQMNSYRWKYFKQLTNYFEWTLFLCVLYFIFPIRQTKTERQFGAAAIAI
CISWFDLIWFLRRIPDIGTYILTIQKTTKTLMKMLLIILLFCMAFASTFYLLLAEHSRFE
NFPIAVLSTFVSMLGDFSYDDLFLNIGYYKNFYSFKLSMFIIFLLLMVIVVNNVLIGLAV
GDTQDVIKMATVQRHKQHMRFMMAVESSLFARLPCFRRRKYPIVYTEYPNRRKTFKDNLN
RFFSGEMNIFYNDEESDDEVEPDTLTRQHLEEILKVRIEEHHKKLKKEMNDFHLEVIEKA
DKVFHNKKNVLVS
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaacttccctcatcgaagaccgaaagaaagaaatgaaatcggactatagcact
ccactaatagaaaggaaaaatacgaatggagaaacgcaatcttctgcgacctcatgtcta
aaggcaaaaaagtctccattgaacccattgattcgagctgtccgacgaggcattctgatg
acgcagcgatatcttgaaaagacaaagaatgagcacctcagtattgcagacagcgatgac
atacgtagaaatatatttcatctcagtgtccaaagagaggagctactggaaattctttta
aaacattttgagaagcatgaacagctcatggaagctctccacagtgaagatttgaatggt
cacacgccagctcatgttgctgtattgcacagtcaaagaaagagcctacaaattcttgct
ggtgtggatgagaatgtttacgctcttcgtagctctaagaatggacagacattgattcat
tgtgctgttgattcgtgcaatccatacatcgtacaagatattctttcggttcgtccagaa
tccctctttgataaagatgatgaaggaagatcacctcagcattatgccgctgctcttcag
gaatcctttcttttggacattctcctctcgcgcggtgcaaacattttggaaacagataac
aacaagtcaacattgcttcacgaagctgctcaggctgggtctatatccaacgttgacttg
ttggtggtcgatgaagtcactctgttacatgcaacagacatggaagagagaacaccatta
catgttgcctgtgccaaaggtttccgaaatattgtctcatttctactggaaaatggtgct
gatccacaagcaagaagtacagatggtaaaaactgtctggaagtcgctataattcacaaa
caagagtatgtcgttaacgagttgctgatgagcacctactggaaagacctcatttgtgat
tggaagaatggggcgatgaaatgctttgcgtaccttgctgagaagatgcccaatcaagcc
aaattattgctcgatcgttgtgttgtgaccagtgatgacaagcgtcattcgcttgactac
aatgttacgtacgatttctttctttttgataatgcaggttctaatccacctgcatttcat
gcactgaaagcaatactgaagaatgacgaagagaagtgcttgactcacaagctttgcagg
aaatatatgagtgttaaatggcgagagaaaggatgttacatttttttgatcgattttatc
ctcttcgcgtgctttcacattttatttaatgtttacgtcgcattggtacgcggtggaatt
actaaacagtggttgcataataacgagcactccagaaatgctacactgtcaacaaattat
ccacgacctattgcaaaccctgacgacactggaccagttattgccacttctatcattgtt
actttaacagtattgaatgttctcaaggaatttgtgcagatgaattcgtatcgctggaag
tatttcaagcaactgacaaattactttgaatggactttgtttttgtgcgttctgtatttc
atattccccataagacaaacgaaaaccgaacgtcagtttggcgcagcagcaattgcaatc
tgcatttcttggtttgatctcatctggtttctacgaagaattcctgacatcggcacgtac
attttaacaatacagaagacaacaaaaactttaatgaagatgcttctgataattttgttg
ttctgtatggcgtttgcatcaacattttacctactgctggctgaacattcgagatttgag
aactttccgatagctgtactaagtacgtttgtttcgatgcttggtgacttcagttacgat
gatttattcctgaacattggctattacaagaatttttattctttcaaactctccatgttc
attattttcctactactaatggtgatcgttgtaaacaacgtgttgattggcttagctgtc
ggagatacccaggacgtgataaaaatggccacagttcaaaggcacaagcaacatatgaga
ttcatgatggcagtagaatcttcgctgttcgctcgattgccttgtttccgtcgaagaaaa
tatccaattgtgtacacggaatatccaaatcgcagaaaaacgtttaaggataatttgaat
cgatttttttctggagaaatgaacattttctacaatgacgaggaaagcgatgatgaagtt
gaacctgacactctaacacgacagcatcttgaggaaattttgaaagttagaattgaagaa
catcacaagaaattaaaaaaagaaatgaatgactttcatttggaagtgatagagaaagct
gataaagtttttcataataagaaaaatgttttagtgtcataa
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