Xenia sp. Carnegie-2017 (soft corals): 124447523
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Entry
124447523 CDS
T08024
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124447523
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124447523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ion_trans
Ank_5
PKD_channel
OVT1
Motif
Other DBs
NCBI-GeneID:
124447523
NCBI-ProteinID:
XP_046854434
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MVGVLECNYIFYMVGVLMETKDSVVEMEDTNEATVVAASRWKLQNSVVLNPLIRAVRRGM
FMTEQYLAEIKDIENLKIKDSDDFGRNIFHLSVQREKLLEFLLEKFKKHEQLMEALHSEN
LNGHTPAHVAVLHNQRKSLQILACADENVYMLRSSKTGQTLIHCAVYQTLIHCAGDVWNP
CIVQDIISTRPQSLIDKDNKGKSPQHYAAALQECFVLNFLLSMGANILEMDNRESTLLHE
AAEAGSLSNVMLLSRDEQTMLRARDVEGRTPLHIACAKGFRNIVSFLLENGADPLVKTND
HENCLEVAVNENKKNIVKELLLSSYWKLLICDWKNGPKKCFVHLIEKMPDQAKLLLDRCV
VTSNHKPNSPDYNITYDFFLLGAVDGSNPPVFDALTAIIKNNEEQCLTHKLCKKYFSVKW
REKGCHLYLINLTIFLSFHILFSVYVCLVRGEFKGKGMHDINKSRSNTSSSKSYVVPLAN
LGEVGPVIITYFIVVLTVFNIFREFVQMNTYRWKYFKLWSNYFEWLLFLCVLYFMFPIKT
SKTEPQFSAAAIAIVISWLDFIWFLRRIPDTSTYILTFQKTFKTMMRMFILIMLFVMAFA
SPFYILMVEKPRFKSFPIAILSTFVSMLGDFKYDDLFLKISDFNAFYYLKLFMFVNFLLL
MVLVVNNVLIGLAVGDTQYVMEMAKVERLKQHMKFMITVESSLFARLPHFRQRKHQSVYT
EYPNCKTSFANYLKRFLAGEMNTFSIKRAEDEVETEVVTRQQFEEILNVKFEEHHEKMKE
LLFRKSWKI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggtaggtgtgttagaatgtaactatatcttctacatggtaggtgtgctaatggagact
aaggattccgttgtcgaaatggaagatacaaatgaagctacagtagtcgctgcttctcgt
tggaagttgcaaaattccgtggttttgaatccattgattcgagctgtccgacggggaatg
ttcatgacagagcaataccttgctgaaataaaggacattgaaaacctcaaaataaaagac
agtgatgacttcggaagaaatatattccatctcagtgttcaaagagaaaagctgctagaa
tttctgttagaaaagttcaagaagcatgagcaactcatggaagctctccacagtgaaaat
ttgaatggtcacactccagctcatgttgctgtgttgcacaatcaaagaaagagcttacaa
attctggcttgtgccgacgaaaatgtttacatgcttcgaagctcaaagactggacagaca
cttatccattgcgcggtttatcagacattgatacactgcgcgggggatgtttggaatcct
tgtatagtgcaggacatcatttctactcgaccacagtccctcatcgataaagacaacaaa
ggaaaatcaccacaacattatgctgcagctcttcaggagtgttttgtcttaaattttcta
ctctccatgggtgcaaatattttggagatggacaacagagagtcaactcttcttcatgaa
gcagctgaggccgggtcattatccaatgttatgctcctatcccgcgatgagcaaacaatg
ttgagagcaagagacgttgaaggaagaacacccctacatattgcctgtgccaaaggtttt
cgaaatatagtgtcgtttctattagagaatggggctgatccactggtgaaaacaaacgac
catgagaactgcctggaagttgcggttaatgagaataaaaagaacattgttaaagagtta
ttgcttagctcttactggaagttactgatttgtgattggaagaatgggccaaaaaaatgt
ttcgtgcaccttattgagaagatgcctgatcaagccaagttactgctggatcgttgtgtt
gtgaccagtaatcacaaaccaaactcacctgactacaatattacttatgacttctttctt
cttggtgctgttgatggttccaatcctccagtttttgatgcacttacagcaatcatcaag
aataacgaagaacagtgtttgactcacaagctttgcaagaaatatttcagtgttaaatgg
cgtgagaaaggatgtcacctctacttgatcaatctgacaatttttttgtcctttcacata
ttgttcagcgtatacgtctgcttggtccgcggtgaattcaaaggaaaaggaatgcatgat
atcaataaatccagaagtaatacatcttcctctaaatcgtatgtagtgcctcttgcaaac
cttggagaagttggacctgtcattattacttatttcattgttgttcttacggtcttcaac
attttcagagaatttgtgcagatgaacacctatcgctggaaatattttaagctttggtca
aactactttgaatggttgttgtttttgtgcgttctatatttcatgttcccaataaaaacg
agcaaaaccgagcctcagtttagcgcagcggccattgcaattgtaatctcttggcttgac
ttcatttggttcctacgaagaattcccgacaccagcacatacatcttgactttccagaag
acgtttaaaaccatgatgaggatgtttatattgatcatgctgtttgttatggcatttgca
tctccattctacatcttgatggttgaaaagccgaggtttaaaagctttcccattgcaatc
ctgagtacgtttgtttcgatgttaggggacttcaaatacgatgatttattcctgaaaatt
tccgacttcaatgctttttattatttaaaactcttcatgtttgtcaatttcctgttgttg
atggtactcgttgtaaacaacgtgttgattggcttagctgtcggagatacccaatacgtg
atggaaatggcaaaagtagaaaggctgaagcaacatatgaagtttatgataacagtagaa
tcatcgctatttgcccgactgccacacttccgtcaaaggaaacaccaaagtgtgtacaca
gaatatccaaattgcaaaacgtcttttgcaaattatttaaaacgatttttggcaggagaa
atgaacaccttttccattaaaagagctgaagacgaagttgaaactgaggttgttacacga
cagcaatttgaagaaattttgaatgttaaatttgaggaacatcatgagaaaatgaaagaa
ttgctctttcggaaaagttggaaaatttag
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