Xenia sp. Carnegie-2017 (soft corals): 124447668
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Entry
124447668 CDS
T08024
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xen04040
]
124447668
Ion channels [BR:
xen04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124447668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
124447668
NCBI-ProteinID:
XP_046854590
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MSEIQNVSRRETSIEMTPFPPSPSPRNRPCDSTSSRPSVRQSNVKFDQFEEVAFCCLKRE
SLPRRWFIKLVSSPWFERTSILVILLNCVTLAMYNPFDKTCATKKCQILEILETAIYAFF
VVEMLIKWMAMGVFGDLGYFKDSWNKLDCFIVLAGTFELAYGEGRYLSAVRSVRVLRPLR
AINRVPSIRILVMLLLDTLPMLGSVLAICFLIFAIFGIIAVQLWQGLLRARCFPQDLNSS
IIKQYNLTEFYRPSFNEYYVCSLSENNGLSKCSPHNFNPYKVNNKVCNQSFLTTENTSSS
HCVDWYQYYTLCRQSGENLHWGSVSFDNIGIATVVIFQIITLAGWSDIMYKIQDVHSFWN
WIYFVFLVFLGSYFMTNLFFVVITSQFQQTKQREKELMKKSRLRCRASVSTVSSSLTQQG
CYTQLLQYLEHLCRRFKKYICSKIKMDKDQSLTQQGCYTQLLCYYKHSCDDDDVDSPNTK
KKCWVKIRDNLKAFVESQHFTRFIMVSIFLNTICMAIEHHGQPKKVTDILETVNVLFTSI
FAIEMLIKIAAFGPYGYIKDAYNLFDGVIVIVSFIDIFADSDTSGLSVMRSFRLLRIFKL
VRFMPELIRQLDVMKLALDNVMSFLALLTLFVFTSSILGMHLFGGKFQFANEDGQLVTSR
ANFDSLFWALVTVFQILTETDWDVVLFDGIRSLSSWSSLYFIFIMVIGDFILFNLLISII
VEGFIDQAVAEENENETADNHATSCLKRSQEWSLFVFSPENKFRRLLEIHKYEWFDRVVL
LLILINCIVMAMEEPGLDKNSEMGQFIQIMQYIFTAVFTIEMSIKVISMGLIIGPDTYLK
SGWNIVDGIFVLISLVDLIVSLTTEGSGGIFRILRVLRAIRTLRPLRVINRYPDLKLVVE
TLISSLKPIGNFFLIAATFFVIFGILGVQLFKGKFYSCHDAKSSLKINNKDQCISNDGNW
MNNVYNFDNLASALLTLFVFSTCDGWTAILYSGIDAVDVDKQPKRDYAKWNVLYFIAFLL
IGRFIVMNMLVGIVIENFHKCHDEQEQNSSSRETVNTRLRSPRNSISEIADPSIPEWRKK
LLRFVTHAYFDLAIAIVIGINVVCMAMEHYNQPKMLTLCLQYANYIFTFLFVLEAVLKLI
AFGIRNYFKDSWNCFDMFIVILSIGGIILDELATSDLRINPTIIRVIRVLRITRVLKLLK
RAEGIRSLLKAIGKALPQVTNLGILYVLVFFIFGALGMELFGRISCKKNECNGLDDTHAH
FQNFGYSVLTLFRVSTGDNWIGILQDTMSSKICNSGEREGCVIINNIAPVFFFSFVLITQ
FILLNIVVAVLMKHLEENTLCDEDESNEGMQSNSHIESSNQEACVSNNPSLQCEDLTSVN
EISRAPVSPSQTSISNERMNTNRSELFVKGSNKENEDSYDMSKDEEELNVLLNSDRKTQK
NLTNQELTKTHRMNNHQMEATEKDSVVHLSIDGKSFESDV
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaatccaaaacgtttcaagacgcgagacgtctatagagatgaccccttttcct
ccttcgccatctcctcgcaatcgaccatgtgattcaacatcatcaagaccttcagttcgt
caatcgaatgtcaaatttgatcagtttgaagaagtagccttctgttgtctaaagcgagaa
agtttaccaagaagatggttcattaaacttgtcagttctccatggttcgagcgtacgagc
attttagtgattttattaaactgtgtaacgttagccatgtacaatccatttgacaagacc
tgcgctacaaagaaatgtcaaattcttgagatcctagagactgctatctacgcctttttt
gtggtggagatgttgataaaatggatggctatgggagtatttggtgatttaggatacttc
aaagactcttggaataaactggattgtttcattgttcttgcaggaacatttgaacttgcc
tacggcgaaggaagatatttgagtgctgttagatcagttcgtgtgttgagaccattaaga
gcaataaatcgagttccaagcattcgcattttagttatgcttttgctggacacgttgcca
atgctaggcagtgttctggcaatttgctttttgatttttgcaatatttgggatcattgct
gttcaactttggcaaggtcttttacgtgctcgctgctttccacaggaccttaacagtagc
atcattaaacagtataatttgacagagttttaccgtccatcattcaatgaatattatgtc
tgttcattgtcagaaaataacggcttatctaaatgcagtcctcataactttaatccgtac
aaggtcaacaataaagtgtgtaaccaaagtttcctcacgacggagaacacgtcatcatca
cattgcgtggactggtaccaatattatacgttgtgtcggcaaagtggagaaaatcttcac
tggggttcagtatcttttgataacattggtatagcaacagttgtaatatttcaaatcatc
acactcgctggatggtcagacattatgtataaaatacaagatgtacattccttttggaat
tggatttatttcgtctttcttgtttttcttggttcttacttcatgacaaatctctttttt
gttgtgataacgtcacaattccaacaaacaaaacaacgcgagaaggagctaatgaaaaaa
tcgcgcctgcgatgtcgggccagcgtcagcacggtatcctcaagtttgacgcagcaagga
tgttatacacagttgttgcaatatcttgagcatctttgccgtcgttttaaaaagtacatt
tgttccaagatcaaaatggacaaagatcaaagtttgacgcagcaaggatgttatacacag
ttgttgtgttattataaacattcttgcgacgacgatgatgtggatagcccaaatacaaag
aaaaaatgttgggtcaagatacgtgataatctcaaagcatttgttgaaagtcaacatttt
acgaggttcatcatggtgtccatatttctgaacacgatttgtatggccatagagcatcat
gggcagccgaagaaagtgaccgacattttggaaactgtcaacgtcttatttacctcaatt
tttgcgatagaaatgctgataaaaattgcggcatttggaccttacggttatattaaagat
gcatataatctgtttgatggtgtgattgtcattgtaagttttatagatattttcgctgac
agcgatacgagtggtttgtctgttatgagatcatttcgactattgagaatattcaaactt
gttcgtttcatgccagagttgatacgtcagttggacgttatgaaactagctttagataat
gtcatgtcttttctggcgttacttactttgttcgtatttacatcaagcattttggggatg
catctttttggagggaaattccagtttgcaaacgaagatggtcagctggtcacatcgcgg
gctaattttgacagtttattttgggcgcttgtcacagtgtttcagattctgactgaaact
gactgggatgtcgttctttttgatggaattcgttctctctcatcatggtcttctctttat
tttatatttattatggtcattggagattttattttatttaatctcctcatctctatcatt
gtcgaaggttttatagaccaagctgttgctgaagaaaatgaaaacgaaaccgctgacaat
catgccacgtcatgtttaaagcgtagtcaagaatggtcactttttgtcttttcaccagaa
aataaatttcgtcgacttttagaaattcataagtatgaatggtttgatcgcgtggtattg
ctgcttatcttgataaattgtattgttatggcaatggaagaacctggattggacaagaac
agtgagatgggacagtttattcaaataatgcagtatattttcacagcagtatttacgatt
gagatgtctatcaaggtgatatctatgggtcttatcattggtcctgatacatatctaaaa
tctggttggaacatcgtcgatggaatctttgtacttatttcactggttgatcttatcgtt
tccttgacaacagagggcagcggtggaatctttagaattctaagagtacttcgagcgatt
cgtactttaagacctctacgagttataaaccgttatcctgacttaaaattggttgttgaa
acattgatcagttcactaaagccgatcggaaacttttttcttatagctgctacgtttttt
gttatatttggaatcttgggtgtacagttgtttaaaggcaaattttattcctgtcacgat
gctaaatcatcattaaaaataaataacaaagatcaatgtatttcaaacgatggaaactgg
atgaacaacgtgtacaattttgacaatttggctagcgctttattaacactttttgtgttt
tcaacatgtgatggctggacggccatattgtactcaggcattgatgcagttgatgttgac
aaacaaccaaaacgtgattacgccaagtggaatgttttgtattttattgcatttcttctg
attggtcgcttcattgtaatgaacatgttggttggtattgtgatcgaaaactttcacaaa
tgtcacgatgaacaggaacaaaattcatcctctagagagacagtgaatacacgattaaga
tcaccaagaaattcaatttcagaaatcgctgatcctagcattcctgaatggcgcaagaaa
ttgcttcgatttgttactcatgcgtattttgatctagccattgctattgttattggtatc
aatgttgtttgtatggctatggagcattacaaccaacccaaaatgttgaccttgtgttta
caatacgcaaactatatattcactttcttgttcgtgttggaagcagttcttaaattaatc
gcttttggaataagaaattattttaaagacagttggaattgttttgatatgttcattgta
atcttgtcaattggtgggattatattagatgagttagcaacatctgatctacggatcaat
ccaactatcatacgtgttataagagttcttaggataactagagtgttgaagcttttgaaa
agagcagaaggaatccgttctttgttgaaagccatcggtaaagcattaccacaggtcacc
aacttaggaattctttatgttcttgtttttttcatttttggagctttaggaatggagttg
ttcggtcgtatatcttgtaaaaaaaacgaatgtaatggtttagatgacacacatgcacac
tttcaaaattttggctactctgttttaaccttgtttcgtgtatctacaggagacaactgg
attggaatattacaggacacaatgagctcaaaaatatgcaattctggtgaaagagaggga
tgtgttatcatcaataatattgctcctgtctttttcttttcatttgttcttataacacaa
tttatcctcctcaatattgtcgtcgccgttttgatgaaacatttggaggaaaatacatta
tgtgacgaggatgaatctaatgaagggatgcagtcgaactcgcatattgaatcttccaat
caagaagcttgtgtgtcgaataatccttctttgcaatgtgaagatttgacttctgttaat
gaaatttctcgcgctcctgtgagcccttcgcaaacatcgatttccaacgaaagaatgaac
acaaaccgctctgaattgtttgtaaagggttcaaataaagaaaatgaagatagttatgat
atgtcaaaagacgaagaagaactcaatgttttacttaactctgacagaaaaactcaaaaa
aatttaacaaaccaagagcttactaagacgcataggatgaacaatcaccaaatggaagca
actgaaaaggacagcgtagttcatttatcaattgatggtaaatcatttgagagcgatgtg
tga
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integrated database retrieval system
