Xenia sp. Carnegie-2017 (soft corals): 124448318
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Entry
124448318 CDS
T08024
Name
(RefSeq) CMT1A duplicated region transcript 1 protein-like
KO
K10266
F-box and WD-40 domain protein 10
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xen04121
]
124448318
Ubiquitin system [BR:
xen04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124448318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_SCAP
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
F-box-like
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
F-box
Beta-prop_DCAF12
Beta-prop_Nup120_160
WD40_like
WDR90_beta-prop_4th
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
124448318
NCBI-ProteinID:
XP_046855284
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MDFFDNTTAISELNIHNAPQLRCNEGKFTTCGHCESCKLGSKIMHAKEWFFRCSEQAQRQ
FVLGLVHRFHSIDLHEYTNTLLKALEGKDFIYARSRNRPSLKEDMSGSVSNHALDAAKLR
RDIIECLNWFELSPYWTKCNFMLGVMKFCSTQLLHAISNESRSFSLVHEEQSLSDTDGKS
NKNVEELDGESNGLQNEEVSLRVTFDSIYQISSMSITPDGTYRPRSELKDQAKSFVEISS
GSKDDISTCNTRRPRSGSARHRILQSTKDEIAPKLHAQELYEDDYVSVDPSSVTDHQMST
SCLLLQLHKDFIRCLPVHLSKLILSYLDKASLVNCLCISRHWRMLCEEVQQDVLVHQIMV
EEVMMMQGATAKGLSANYAKCLKVYIPKNEDEDIRDEADADSANHTNLTLLRRADELKFR
SMAYCYEGMEITDVYMEERNLFCGSYNVFVLKDSEDPNRCATYNGGSYVAVGSSDRRVKL
INVSTGRIEKIIRGHSGSIRSVFVNEKRGFILSGSYDTSIRLWDLHSGKCCCIFRGHQGT
VLCIALEGNVVASGSRDKSVKVWNIDTGKCRRTFRHRHVVQCVEVSECLVVSGCQGCKVK
VWDIEAAILIKSLDGHQCTITGVTFNHYHIVSSSTDCYVLAWSTIGRHTKCLQAFRHPKA
VHCVKLMYCRVITGSADGKLRIWSLLTGDCLRIIRGNSKNDVISSLYVVDDRIVINTLSN
LLVLNFEAVVWNYDLLPDRPESLGTLNNFAGAPPKCRSRAYVRAQKLVRGTAEVDKVLEP
ALSALSLSCLLERSISTTALHRKSVGRISSAPTHITRQVNNSIEQHVQRLHRARTPAVVE
VGHPRKSRPQSSPAYMQFKYGQVKNGQKMKEHDLSIPQSVRPMNLSRSRVLTTSLSVPTL
QTPVTVGQHQGWTTSAKDIVMPQNKLMLTAAKARELVKRRSQTADSTKASPVPVFQKQTR
KAEASRKCVANEKPVSCLNLRTFSQQLENNRIHQDEKKRARKTSSISQVLRPQPCLT
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggatttctttgacaacacgacggcaatctcggaactcaacatacacaatgcccctcaa
cttcgttgtaacgaaggaaaatttacaacatgtggacattgtgaatcctgtaaactggga
agcaagataatgcatgcgaaagaatggttctttcgatgctccgagcaagcccagcgacaa
ttcgttctggggctagttcatcgttttcattccattgaccttcacgaatacacgaacaca
ttattgaaggcattggaaggaaaagatttcatttatgctcgttcgagaaacagacctagc
ctcaaagaagacatgtcgggctctgtttcgaaccatgctcttgatgccgcgaagctgagg
agagatattatagaatgcttgaattggttcgagttgagtccatactggacaaaatgtaat
tttatgttgggtgtgatgaagttttgcagtacgcaattgcttcatgccatcagcaatgaa
tcccgtagtttctctttggttcatgaggagcagagtttatcagataccgacggaaaatca
aacaaaaatgtggaagaactagatggtgaaagcaatggattgcagaacgaagaggtatct
ttaagagttacctttgattccatctatcaaatttcatcaatgtctatcactccagatggc
acatatagaccaagatcagagctcaaagatcaggcaaagtcatttgtagaaatatcaagt
ggaagcaaagatgatatcagtacctgtaatacaaggcgtcccagatcaggctctgcaaga
catagaattttacaaagcacaaaagatgaaatagcacccaaactacatgctcaagagctt
tatgaagatgactatgtttctgtggacccatcaagtgtgacagatcatcagatgtcaaca
tcttgtcttcttctacagcttcataaagacttcatacgatgccttcctgttcatctgtca
aagcttatacttagctatttagataaagcaagcttggtgaactgtttgtgcatcagtaga
cattggagaatgctgtgtgaagaggtacagcaagatgtccttgtgcatcaaattatggta
gaagaagttatgatgatgcagggagctacagccaagggactttccgcaaattatgcaaag
tgtttgaaagtttacattccaaaaaatgaggatgaagatatacgcgatgaagcagatgct
gactcggcaaatcacacgaatttaactttattacgacgtgcagacgagttgaaattcagg
agtatggcatattgctatgaaggtatggaaataaccgatgtttatatggaagaaagaaat
ctgttttgcggttcgtacaatgtgtttgtcctgaaggattccgaagatcctaaccgctgt
gcgacgtataacggtggctcgtacgttgcagtcggctcatcggatcgccgagtaaagttg
atcaacgtctcgacaggtcgaattgaaaagattatccgtggtcattcgggctccattcgt
agtgtcttcgttaacgagaaacgcggctttatcttgagcggtagttatgatacatcgatc
agactgtgggacttgcacagtgggaaatgttgttgcatttttagaggtcatcagggcacc
gttttatgtattgcactcgaaggaaatgtcgtcgcttcaggctccagagacaaaagtgtc
aaagtgtggaacattgatacgggaaaatgtcgacgtacatttcgtcatcgtcacgttgtc
caatgtgtcgaggtttcggaatgtcttgtggtcagcgggtgtcaaggatgcaaagtaaaa
gtctgggacatagaagcggcaattttgattaagagtcttgatggtcaccagtgtaccatt
actggagtcactttcaaccattaccatatcgtgagttcaagcactgactgctatgtgtta
gcctggagtacgattggcagacataccaaatgtctgcaggcatttcggcatccaaaggcg
gttcattgtgtaaaattgatgtattgtagagttataactggttcagccgatggcaagtta
agaatatggagccttttgactggagattgtctgcgtataattcgtggaaacagcaagaat
gacgtcatttctagtctttatgtggtggatgacagaattgtcatcaatactctgagtaat
ttgttggtgttgaattttgaggccgtcgtgtggaactatgacttactgcctgatcgaccc
gaatctctaggcacattgaataactttgctggtgccccacctaaatgtaggtctcgtgcc
tacgtccgagcacagaaactagtacgtggcaccgcggaggttgacaaagtacttgagcct
gcgctatcggcgctatctctcagctgtctcctcgagagatccattagtacaactgcgctt
cataggaagagcgttgggcgaatttctagtgcaccaactcatattactcgtcaggtgaac
aatagcattgaacaacatgtacagcggttgcaccgagccaggacaccagcagtagtcgaa
gttggacatcctagaaagtcacgtccacaatcatcgccggcgtacatgcagtttaaatat
ggacaagtgaaaaatgggcagaaaatgaaagaacacgacttatcaataccacaaagcgtt
cgaccaatgaacctcagcagatcacgtgtactaaccacgagtctatctgtgcccacgtta
caaacgccagtcacagttggtcagcatcaaggatggaccacatctgccaaagatatagtg
atgcctcaaaataaactgatgctcacagccgcgaaagcgcgagaactcgtgaaaagacga
tctcagaccgctgactcaacgaaagctagtccagtcccagtttttcagaaacaaacaagg
aaagcagaagcatcaagaaagtgtgtagctaatgaaaaacctgtttcttgtttgaatctc
aggacttttagtcaacaattagaaaacaacaggatccatcaagatgagaaaaaacgagct
cgaaaaacttcgtcgattagtcaagtacttagaccccagccttgtttgacgtaa
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integrated database retrieval system
