Xenia sp. Carnegie-2017 (soft corals): 124448368
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Entry
124448368 CDS
T08024
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xen03041
]
124448368
Enzymes [BR:
xen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124448368
Spliceosome [BR:
xen03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124448368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
124448368
NCBI-ProteinID:
XP_046855332
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSCKIVGFSAVGKGIFKSSTLFTQLARTMSRFGRERGYDTSRSDRKGSYGGGGGSRSGGY
SGGHGGTYGGSRSGGYGGGGGSYGGGGGYSGGGGYGGGKKEKFNSPGSNLRKPKWDINSL
PRFEKNFYREHPNVQNLSEDEVQVYRKSKEMTLSGRNVPRPVRTFSEMTFPDYLTSELAK
MGFTAPTAIQAQGWPMAMSGRDVVGIAQTGSGKTLSFVLPGIVHINHQPLLQHGDGPIML
VLCPTRELAQQVQGVAQQFGRSCKVRTTCVYGGAPKGPQIRELERGSEIVVATPGRLIDM
LEARKTNLRRCTYLVMDEADRMLDMGFEPQIRTIIEQIRPDRQVLMWSATWPKEVQTLAK
DFLKDYIQVNIGSLQLSANHNILQIVDVCQEYEKEGKLAKLLEEIMGEKENKTIIFTETK
RKADDLTRSLRREGWPCMCIHGDKSQPERDWVLNEFRSGNAPILIATDVASRGLDVNDIK
FVINVDYPSSSEDYIHRIGRTARSTRTGTAYTFFTQANAKQAKDLVNVLKEAKQQVSSKL
LELVEIASHFTGRSRSRYRNADKSSSGAGGFKSGGGSGAYKSSGGYKSGGGGYHNSSSSG
GYHSGSGGYNSGSSGYNNSGSGGYGSTGGAYNKGGGSSTHNGYGQNSHSSSNGSYHQQQG
GSQQSNYQQQGYGGYQQPQSYSGYQQHQPQSTGYQNTGGYSYAQSYQTGYNASGYPSQ
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtaaaattgttggcttttcagccgtgggaaaaggcatttttaaaagttcaaca
ttgttcactcaacttgcacgtaccatgagtcgatttggcagagaaaggggctacgatacg
agtcggtctgacagaaaaggaagttatggtggcggaggaggaagccgaagtggtgggtat
agtggaggtcatggtggtacatatggtggtagtcgaagtgggggttatggtggtggtggt
ggaagctatggtggtggaggaggatactcaggaggtggaggatacggtggtggaaagaag
gaaaaattcaacagtcctggttcaaatcttagaaaacccaaatgggacattaacagtttg
ccacgatttgagaagaacttctatcgagaacatcctaatgtacagaacttgagcgaggat
gaggttcaagtgtataggaaatccaaagaaatgactctttctggtagaaatgtcccaaga
cctgttagaacattcagtgaaatgacatttccagattatctaacatcagaacttgcaaag
atgggttttacagcgccgactgctatacaagcacaaggttggccgatggcaatgtctggt
agagatgtcgttggtatcgcccaaacaggatcagggaaaacactctcgtttgtcttacct
ggaatagtccatattaatcatcagcctttgttgcaacatggtgatggtcccattatgctc
gtgctttgccctacgcgagaattagctcaacaggtacagggtgttgctcaacagtttgga
agaagttgcaaagtacgtacgacatgtgtctacggtggagcccctaaaggaccgcagata
cgagaacttgaaagaggaagtgaaattgtcgttgcaacacccggccggcttattgacatg
ttagaggctcgcaagactaacctaagacgttgtacgtatcttgttatggacgaggcagac
aggatgttggacatgggttttgaaccacaaatcagaactatcatcgagcagatccgaccc
gaccgtcaagttctcatgtggagtgccacgtggccaaaggaagtgcagacattggctaaa
gattttcttaaggattacattcaagtgaatatcggttctcttcaacttagtgctaatcac
aatattctacagattgttgacgtttgccaggagtatgaaaaggaaggaaagctggcaaaa
cttttggaagaaataatgggcgaaaaagaaaataagacgatcatattcacggaaacaaaa
cgaaaagcggatgacctaacgcgaagtcttcgacgagaaggatggccatgcatgtgtata
catggagataagtctcaaccagaacgtgattgggttttgaatgaattccgctcgggaaat
gcacccatcttgatagcaactgacgtcgcctctcgtggtttggatgtaaacgatatcaag
tttgtgataaacgtcgattatccatcatcgagtgaggattatattcatcgaattggtcgc
acggctcgctctacgaggactgggacggcctacacttttttcacgcaggcgaacgccaag
caagcgaaagatcttgttaatgttctcaaagaagctaaacagcaagtgagcagtaaactt
ttggagcttgtggaaattgcaagtcatttcactggaagaagccggagtcgttatagaaat
gccgataagtcatccagtggtgccgggggctttaaatccggtggaggaagtggtgcgtat
aagagcagtggtggatacaagagtggtggtggtggatatcataatagtagtagcagtggt
ggatatcacagtggcagtggtggatacaatagtggtagcagtggatacaataatagtggt
agtggtggatatggtagtactggtggtgcatataacaaaggtggtggaagcagtactcac
aatggatatggacagaattctcactcaagtagtaacggtagttaccaccaacaacagggt
ggctcacaacaaagtaactaccaacagcaaggttatggtggttaccaacagcctcaaagc
tatagtggttatcaacaacaccagccccaatcaacaggatatcaaaatactggtggttac
agctatgcacagagctaccagacaggttataatgccagtggctatccatcacagtaa
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