Xenia sp. Carnegie-2017 (soft corals): 124449245
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Entry
124449245 CDS
T08024
Name
(RefSeq) uncharacterized protein LOC124449245
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Pathway
xen03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124449245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xen03009
]
124449245
Ribosome biogenesis [BR:
xen03009
]
Eukaryotic type
Pre-60S particles
RNases
124449245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Med15_N
Motif
Other DBs
NCBI-GeneID:
124449245
NCBI-ProteinID:
XP_046856168
LinkDB
All DBs
Position
Unknown
AA seq
1119 aa
AA seq
DB search
MFPSGGYFRSANCPFYQHGLCHRPYCHFRHTVPDYKPTVALNSKKSEEQKKDPVVKHTHN
HGEDVKQQKKDLVQKGVQEKTKTTKNKHNVEVKTSNQPIFKRTALEEKLIAFSANADMIL
TDSDSDADTPSKQNDDNQSTVSKPQLLPCEEKGKSFQNNSVKGSSCTIDMTTSSVSTYKS
TEVISDDKMLAICEKLEEKDKPKAIVISDSEDELLQEIKDENNDRLSNACKESRTKEILE
LPPKSSVGMTMNDSETCDEIFVDTEELHENKTGKPNEKIEEQVKSLQGKKLIVMIEDLQN
CGAGSHFILKSTKEDAKIKKSKKKEKNKPDSSKLADVDFFAADVSKLKKKMTAKEGKHVE
KSKHKIISESDKKKMKKKLGESNLAPVKEKSKIQRYKELKRLFKDSENTLDKLEDQQKKS
LLVDNKFVATLEKEKETIRPSDFLLKKPKHSWKNESKGFKKDKDDSKSNVHNNADETTEE
KQSSKNPFVLVAPDKKVILIPDNDTVCENSQNADALGTSDTNRHSDYSGLDEDSEENELL
RIFNDYNPDNDEPEMNDCVDDLLMNIDVVNVRDSDDKKEKKLAQSSKSISGLKRQSSEGT
SAAFKKQRVAHQPNLVITRTPQFRNNTSTFYRHLPRPLQGTLAPPPRPKIQATSQGEKDL
VTSTHVKQRVTHFTKGSGILTQRPRIRLEYGAKVPQSVRQKYLDKIVDEYLCFYKDQQEA
FDKAEKEEKQVYLKSPRRQVYINLCVNLIKKLRDSLEKLNEDIRHRNPLASKSTLPPSPS
KRAKVDSLTTARIARQDFEEQNDSSEKAVKNNGGMTEEEFYTRMHKYVLSKEELEGNAFP
RPSSVPGRAEVTDCYSKIKRNPNDSTRHICCRCGKAFVILESGEYPHKEECVYHHGRLIR
SRTAGEIVTSYTCCQGESGCIGCCVAKAHVRATYWSEETGFVVTRKNPNSYRKKIYALDC
EMCYTTKGLELTRVTVVDYNGQQVYDTLVKPKNDIIDYNTRFSGITEESMIGVAMTLRDV
QSVLLNLFYEDTILIGHSLESDLRSLKIIHSTVVDTSIVFPHRLGLPYKRALKTLMAEYV
RKIIQDSEEGHDSLEDAVSCIELMLWRVKEDMKYKQSKK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgtttccatctggaggctattttcgtagcgccaattgccctttctatcaacatggcctt
tgccacagaccatattgtcattttcgtcacactgtaccagattacaagccaactgttgct
ctcaattcaaagaaaagcgaggagcaaaagaaagatccggtggtgaagcacacacacaac
catggtgaagatgttaaacaacagaagaaagacttagtgcagaagggcgtacaggagaaa
acaaagaccacaaaaaacaagcataatgtggaagttaaaacctcaaatcaaccaattttc
aaaagaaccgctctggaagaaaaactgattgcattctcagcaaatgcagatatgatattg
acagactccgacagtgatgctgatactccatcaaaacaaaatgatgacaatcaatcaact
gtttccaaacctcaacttctaccatgtgaagagaaaggaaaatcatttcaaaataactct
gttaaaggaagtagttgtacaattgatatgacaacaagtagtgtttccacgtataagtct
actgaagtgatttcagacgataaaatgcttgcgatatgtgaaaaattggaagagaaagac
aagccaaaggcgatagttatttccgattccgaagatgaactattgcaagaaatcaaagat
gaaaataacgaccgtttgagcaatgcttgtaaggaatctcgcacgaaagaaatattggaa
ttacctccaaaatcaagtgttggcatgaccatgaatgacagcgaaacgtgcgatgaaata
ttcgtcgatacagaggaactgcacgaaaataaaacgggaaagccaaatgagaagatcgaa
gagcaagtgaaaagtttgcaaggaaagaagttgattgtcatgattgaagatcttcaaaac
tgtggagccggcagccattttatattgaaaagtacgaaagaagacgcaaagattaagaaa
agtaagaaaaaggagaaaaacaaaccagattcttctaaactggccgatgttgatttcttt
gctgccgatgtttcgaaattaaagaaaaaaatgactgccaaagagggaaaacacgtagag
aaatcaaagcacaagataataagtgagagcgataagaaaaagatgaaaaaaaagcttggc
gaaagtaatttagctcctgttaaagagaagagtaaaattcaacgctataaagagctgaag
agacttttcaaagactccgaaaacactcttgataaacttgaagatcaacaaaagaaatct
ttgttggtagacaacaagtttgttgcgaccttagagaaagaaaaggaaacgattagacca
tcggattttcttttaaagaagcccaaacattcttggaaaaacgagtctaaaggatttaaa
aaggataaggacgattctaaatcaaacgttcataacaatgctgatgaaacaaccgaggaa
aaacaaagttcgaagaatccatttgttttggttgctcccgataagaaagtaatacttata
ccagataatgacactgtttgtgaaaattctcaaaatgcggacgctctgggtactagtgat
accaatagacattctgactattcgggtctcgatgaggatagcgaggaaaatgaattattg
agaatatttaatgattataatcccgacaatgatgaacctgaaatgaacgattgtgttgat
gatcttttaatgaatattgatgtcgttaatgttcgtgacagtgacgataaaaaagagaaa
aaacttgcacagtcatcaaaatcgattagtggattgaaaagacagtcaagcgaaggaacg
tccgcagcatttaagaaacagcgcgttgctcatcaacctaatctggtcattacgcggact
cctcaattcagaaacaacacatctacattttaccgacatttacctcgtcctcttcaaggc
acgttagctcctccgcctcgtcccaaaattcaagcaacatctcaaggtgaaaaagatctc
gttacgtcgacgcatgtcaaacaaagggtgactcactttaccaaggggagcggaattttg
acgcagagaccgaggataagactggaatacggagcaaaagtacctcaaagtgtgaggcaa
aaatatttggataaaatcgtcgatgaatatttatgcttttataaagaccaacaggaagcg
tttgataaggccgagaaggaggaaaaacaagtttacctaaaaagccctaggcgtcaggtt
tatattaacctgtgcgttaatcttatcaaaaaacttagagatagtttagaaaaactgaac
gaagacatccgccatcgcaatcctttagcaagcaaatccacgttaccacctagcccgtca
aaacgtgcgaaagttgactcgttgactacggcgaggatcgctcgacaagatttcgaagaa
caaaatgatagttctgagaaagcggtgaaaaacaatggaggcatgacagaggaggaattt
tacacaaggatgcataagtatgtgctgtcgaaagaagaattagaaggaaatgcctttcct
cgtccttcgagtgtcccaggtcgggcggaggtcaccgactgttattcaaaaattaaaaga
aatcccaacgattccacacgtcacatctgctgtcgatgcggcaaggcttttgtcattttg
gaatctggagaatatccccacaaagaagagtgtgtctatcatcatggtcgattgattcgt
agcagaactgccggagaaatagtgacgtcatacacatgttgccaaggtgaatctggttgt
attggctgttgcgttgctaaggctcatgttcgcgcaacctattggtcggaagaaactggt
tttgttgtcacacggaaaaatcctaattcgtatagaaagaaaatttacgccttggattgt
gaaatgtgctacacaactaaaggtttggaactcactcgggttaccgtggtagattacaac
ggtcaacaagtttacgatactcttgttaaacctaaaaacgatatcattgattataataca
agattcagcggaataactgaagaaagtatgattggagttgccatgacattacgtgacgta
caaagtgttctactcaacttgttttacgaagatactattttgattggtcatagcctggaa
agtgatttaagatcactgaaaatcattcacagtacagttgtagatacatcgatcgtgttt
cctcatcgtttgggcttgccctataaacgagcgttgaaaacattgatggctgaatatgtt
agaaaaattatccaagacagcgaggagggacacgacagtttagaagacgctgtttcttgc
atcgagttgatgttgtggagagtgaaagaagatatgaaatacaaacagtcaaagaaatga
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