Xenia sp. Carnegie-2017 (soft corals): 124449267
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Entry
124449267 CDS
T08024
Name
(RefSeq) LOW QUALITY PROTEIN: TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
xen
Xenia sp. Carnegie-2017 (soft corals)
Brite
KEGG Orthology (KO) [BR:
xen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xen03021
]
124449267
Transcription machinery [BR:
xen03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124449267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TOR1L1_N
TPR_Trm732_C
HEAT_2
ResIII
ARM_ECM29
HEAT_ECM29
IFRD
KH_DTX3L
Motif
Other DBs
NCBI-GeneID:
124449267
NCBI-ProteinID:
XP_046856160
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MTSRLDRLLVLLDTGSTPVIRRTAAQQLGEVQKLHPHELKXLLKRVHVHLKSNNWDTRIA
AGEAIEAIASNVPKWVPYGCKAQCDEASVVPGSLEKKQDMLMFEKFDITHVLKHGEALLG
SSGQEYDVVDEELLGLDAKERLARQQELLRKRLGLVPGLETNLDIVLDDEDILSPHLVVK
KSFQKQRSRECQSTADLVAAEIAAISNSAGMSSREKNRAKRRVKIIAKQRSRENNSPSTP
KDEKEFLPEKKMKLTAQVVVDQPEDPDKIVIDSIPDTTSWIEEEVEWPFTLFCQELCHEL
FHPSWEVRHGAAIGLRHIVRIHGTGAGKRTDTPQDEMRTANELWLEDMSLKLLCVFALDR
FGDFVTDEVVAPVRETCAQTLGVVVKHMKCEAVKSILNILLTLQAQNEWQVRHGGLLGIK
YLLAVRKDMTEQLLPLVLSPLTTGLEDCDDDVRAVSATAMLPVVDQMLKLSVAKIPSILW
ILWESLCLLDDLSASTSSILMLLAAIVSSSRAQSEWAVTGRQDISLSCVLPRLWPFLRHN
ILCVRXATLQTLKVILDTSDVRSNELAPLDFWLTPILENAMRYCFERFLVEQDIELLGLL
QEVWRSIIRCGQYKQVAHLTSQWGNVWLSLSMYPKSAEFNEALVISTPAQVKEGAKNAVV
TDRIGGLLVGKTLSEVEAIILRCRHAAARALGFLCCHLSTFGDDACLAVLDLIVQCLHGA
LSSNSSSQHIIVSMTITEWASLDKNHKHLSTLSTKLIENLTSSVVYDEVSLLFTRLQTDC
QNLQNTFQEKGISTSPQNNSNYHTIESASALVSNVFQEAVKILPSKDISALEGKRQHLVS
TIGQLQSEYEKHSIRVSSVIAGALVTMNALPSKLNPIIRPLMEAIKKEEDAGMQQFAACN
LTKLLECCLQRMPCPNAKIVKNLCSYACNDPNQTPIIARQMETPSNSHSGSTNIEMDSCY
TGIITLYKQNKSNLSNTKKDVSKVGVASDMPSSVNDTQKDEEHRKNVRLQRIGSEITLRN
CKTFQGGFAAKSRTLGWLTQTLGRNLSEEDVEKLRNNVTSAQEIVNTLQLLELLIPALHE
NLQKKIFDLMPTILQCIVHPYNSVRHMAARVVGTLSILFSSNVMEILLEKVIPLLNDGEN
VGGREGAIETIYYITTCLQVDVIPYTVLLIIPTLGAMSDYSEHVRLMAAQCFATLISLIP
LESSSKSVQLSESLSCKRDKERHFLQQLFGEASLDNFIVPVPIKAELRKYQQDGVNWLAF
LRKYKLHGILCDDMGLGKTLQTICMVAGDHHEKKVAINEHDGNNHQILPSLVVCPPTLTG
HWCYEVEKFVTKDFLNPLHYTGSPGERYRLREKVKRHNLVVASYDIVRNDSDFFKSISWN
YCVLDEGHIIKNAKTKMSKVIKELRANHRLILSGTPIQNNVLELWSLFDFLMPGFLGSEK
KFQAQYGKPILMSRDAKSSSKEQEEGALAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQD
YYCELSPLQLQLYEDFAKSKAKQDVESNLNEDGEKLDKKRGSTHVFQALQYLRKVCNHPA
LVLTPTHPEYERIMAQLKNQATSLHDINNASKLVALRQLLQDCGIGVSQSSETEAIVSQH
RVLLFCQFKSMLDIIESDLFKCHMPTVTYLRLDGSTAAGQRHSLVQRFNDDPSIDVLLLT
THVGGLGLNLTGADTVIFVEHDWNPMKDAQAMDRAHRIGQKKVVNVYRLITRGTLEEKIM
GLQKFKLNIANTVITQENSSFAAMDTSNMLDLFTVDNKKEKKSTASKSSAKTSMSEILEN
LGELWDEGQYEQEYDLNTFMNKLAS
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcagacttgaccgtttgctggtacttttggataccggatcaacgccggtcata
cgaagaacggctgcccagcagctgggtgaagttcagaaacttcatccccacgagctgaaa
nacctcttgaagcgggttcatgttcatttgaaaagcaataactgggacacaagaattgct
gctggtgaagctattgaagccatagcatcaaatgttccaaaatgggtaccttatggatgc
aaagctcaatgtgatgaagcatctgttgttccaggaagtttggaaaagaaacaagatatg
ttgatgtttgaaaagtttgacattactcatgttttgaaacatggcgaggctcttctggga
tcatctggtcaagaatatgatgttgtagatgaggaattgctgggacttgatgccaaagag
cgacttgctcgtcagcaagaattgcttaggaagcgtttaggcctggttcctggtcttgag
actaatttggatattgttttggatgatgaagatattttgtcaccacatcttgtggtgaag
aaatcttttcaaaaacaaaggtcaagggaatgtcagtcaacagcagatcttgttgctgcg
gaaattgctgcaatttcaaattccgctgggatgagctcgcgagaaaagaatcgagccaag
aggagagtgaagattatagcgaaacagagatcaagagaaaataattccccttctactcca
aaagacgagaaagaatttctaccagaaaagaaaatgaagctcacagcacaagttgttgtc
gatcagccggaggatcctgacaagattgtcattgattccattcctgacacaacatcgtgg
attgaagaggaagttgaatggccttttacattgttttgccaagaactttgccatgaactc
ttccatccatcttgggaggtacgtcatggtgctgctataggtttgaggcatattgtacgt
atacacggcactggagctggtaaaagaacggatactcctcaggacgaaatgaggactgcc
aacgagctatggttggaagatatgtctttaaagttgttatgtgtgtttgcattagatcgt
tttggtgattttgtaacggatgaggtagttgctccagtacgcgaaacttgtgctcaaacc
ctgggcgttgtcgtgaaacatatgaaatgtgaagcagtcaagagtatattaaacatcttg
ctgacactgcaggctcaaaacgagtggcaagtgagacatgggggactactggggatcaag
tatttgcttgccgttcggaaagatatgaccgagcagttacttcctctcgtgctgtctcct
ctaactaccggattagaagattgtgatgatgacgtcagagctgtgtcagcgacggcgatg
ttaccagttgttgatcaaatgttaaagttgagcgttgctaagattccgtctatcctttgg
atcctatgggaatccttgtgtcttctagatgatctttctgcatctaccagtagcattctt
atgttgttagccgccatcgtatcgtcttctcgagctcaatcggaatgggccgtgaccgga
cgtcaagatatttcgttgagttgtgtcttacccagactgtggccgtttcttcgtcataat
atcttgtgcgtacgannggccacacttcaaactttgaaggtcatccttgatacgtcggat
gtacgttcaaatgagcttgctccattggatttctggttgacaccaatactggaaaacgca
atgcgatattgctttgaaagatttcttgtcgaacaagacattgaactacttggattgctt
caagaggtgtggaggagcattattcgttgtggacaatacaagcaagtagctcatctgacg
tcacaatggggcaatgtttggttgtcgctatcaatgtatccaaagtcagcggaattcaat
gaagcccttgttatcagcactccagcacaagttaaggaaggcgctaaaaacgctgtggtt
actgaccgtataggaggtttgttggttggtaaaactctctctgaagttgaagctattatc
ttacgttgtagacacgccgctgcacgtgcattggggttcctttgttgtcatctgagtaca
ttcggtgatgatgcgtgtttagctgtgttggatctcatcgtgcaatgtctccacggagcg
cttagttcaaactcctcttctcaacatatcattgtttccatgacaatcacagaatgggct
tcacttgataagaatcataaacatttgtctacgctttctaccaaacttattgaaaatctg
acctcgtctgtcgtttacgatgaagtcagtttattatttacgagattgcaaacggattgt
cagaacttgcaaaacacgtttcaagagaaaggaatcagcacttcaccccagaataattca
aattatcacacaattgaatctgcttcagctcttgtctctaatgtttttcaagaagctgta
aaaattttaccgtccaaagacatcagtgctcttgaaggcaagcgtcaacatcttgtatca
actattggacaactacagagtgaatatgagaaacacagcattcgtgtatcttccgtcatt
gctggggctctcgtcacaatgaacgcattaccttccaaactcaacccgatcattcgaccg
ttaatggaggctataaaaaaggaagaggatgcaggcatgcagcaatttgccgcctgtaac
ttaaccaagttgttggaatgttgtcttcaaagaatgccatgtcccaatgcaaaaattgta
aagaatctttgctcgtatgcttgcaacgatcctaaccagactccaatcatcgcgcgccaa
atggaaactccttcaaactcccattctggatcaacgaatatagaaatggacagttgctac
actggcataattactttatataagcagaacaaaagtaatttatctaacaccaagaaagat
gtatccaaagttggtgttgcctcggacatgccgtcgtcagtgaatgacacacaaaaagat
gaggagcatagaaagaacgtgcgactgcaaaggattgggtcggagataacgttacgtaat
tgcaagacatttcaaggaggatttgccgcaaaatcccgaactttgggatggctgacacaa
actcttggaaggaatctttcagaagaggatgttgaaaaacttcgcaacaacgttacgtcg
gctcaagaaattgtaaacacgttacagttactggaacttcttattccagctcttcacgaa
aacttacagaaaaagattttcgatcttatgcccacaatccttcagtgtattgtacatccg
tacaacagcgtacgtcacatggctgcgagagtagtgggaacattgagcatattgtttagt
tcaaacgtgatggagattttattggaaaaagttattccccttctaaatgatggggagaat
gttggtggtcgagagggagcaatagagacgatatattacattacgacttgtcttcaagtt
gatgttataccttacacagttttgctcatcattccaacgttaggagcaatgagtgattac
tcggagcatgtgagactcatggcggctcaatgctttgcaaccttaataagtctaattcct
ctagagtcatcctcgaaatctgtgcaactgtcagaatcactgagctgtaaacgtgacaag
gaaagacattttctacaacaattgttcggcgaagctagcttagataatttcatagttcct
gtaccaatcaaggcagaattaagaaagtatcaacaggatggtgtaaattggttagcgttc
ctgaggaaatacaaactccatggtatactctgtgatgatatgggactgggtaagactctt
cagacgatctgtatggtagctggtgaccaccatgagaaaaaagttgctatcaacgagcac
gacgggaacaatcatcaaattttgccatctcttgtggtttgtcctcctaccctcaccggt
cattggtgttacgaggtcgaaaagttcgtcactaaagacttccttaatccgttgcattat
actggatcaccgggagaaagataccggttgagggagaaagtcaagcgacataatcttgtt
gtagcgtcttatgatattgttcgtaatgacagtgactttttcaaatcgatttcctggaat
tactgcgttttggacgaaggacacatcataaagaatgcaaaaacaaaaatgtctaaagtc
ataaaagaattacgagccaatcatcgtcttattttgtcaggaacgccaatacagaacaat
gttcttgaattgtggtcgctgtttgatttcctcatgcctggtttcttgggcagcgagaaa
aaatttcaagcgcaatatggaaaaccgattttgatgagcagagacgcaaaatcttcgtcg
aaagagcaagaggaaggtgcattggctatggaggccctacatcgtcaagttttaccattc
cttttacgaagaatgaaagaagatgtcttacaagatttacctccaaaaattatccaggat
tattattgtgagctatctccattacagctgcaattatacgaagattttgcgaagagcaaa
gcgaaacaagatgtagagagcaatctgaatgaagatggtgaaaagcttgacaaaaagaga
ggatcgacgcacgttttccaggctcttcaatacttgaggaaagtatgtaaccatcctgcc
ctagttttaactcccactcatcctgaatatgagcgaatcatggcacagctaaagaatcag
gcgacatcacttcatgacattaataacgccagtaaactggttgctttaaggcaacttctt
caagattgcggtattggagttagtcagtcctcagaaacggaagcaattgtgtcgcaacat
cgcgttttgcttttctgtcagttcaaaagcatgttggatatcatcgagagtgatctattc
aagtgtcatatgcccactgtgacgtatctccgtttagatggtagtacagcggctggccaa
cgacattcgcttgttcaaagatttaacgatgatccttcaatcgatgtcttacttttgacg
acgcacgtcggaggtctgggtcttaatctcactggagcagacactgtgatatttgttgag
cacgactggaatccaatgaaggacgcgcaggccatggaccgagcccatcgtattggacag
aagaaagtagtcaacgtctacagactaatcacgcgtggaaccctcgaggaaaagataatg
ggacttcaaaaattcaaactgaacatcgcgaatacggtcatcacccaggaaaactcaagt
tttgccgccatggatacgtcaaatatgttagacttgttcacagtcgataataagaaagag
aaaaagtcaactgctagtaaatcatcagcaaaaacatcgatgtccgagattctggagaat
ttaggcgaactgtgggacgaaggacagtacgaacaagaatatgatctcaacacttttatg
aataaactagcgtcatga
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integrated database retrieval system
